EnhancerDB
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  3. vista25296[chr17:56468859-56469318]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25296[chr17:56468859-56469318]
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Tissue distribution of vista25296
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Transcription factor that possibly regulate vista25296[chr17:56468859-56469318]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 56468544 56469354 POLR2A UCSC Txn Factor no Conserved 108275238
chr17 56468693 56469411 NFIC UCSC Txn Factor no Conserved 108275242
chr17 56468702 56469582 TCF7L2 UCSC Txn Factor no Conserved 108275245
chr17 56468730 56469382 EP300 UCSC Txn Factor no Conserved 108275248
chr17 56468750 56469352 MYBL2 UCSC Txn Factor no Conserved 108275252
chr17 56468763 56469232 TCF12 UCSC Txn Factor no Conserved 108275258
chr17 56468785 56469335 GATA2 UCSC Txn Factor no Conserved 108275266
chr17 56468806 56469245 TEAD4 UCSC Txn Factor no Conserved 108275277
chr17 56468820 56469220 MXI1 UCSC Txn Factor no Conserved 108275279
chr17 56468822 56469169 FOXA1 UCSC Txn Factor no Conserved 108275281
chr17 56468835 56469149 FOXA2 UCSC Txn Factor no Conserved 108275283
chr17 56468837 56469196 SP1 UCSC Txn Factor no Conserved 108275285
chr17 56468841 56469541 GATA3 UCSC Txn Factor no Conserved 108275289
chr17 56468853 56469180 MBD4 UCSC Txn Factor no Conserved 108275293
chr17 56468856 56469135 BCL3 UCSC Txn Factor no Conserved 108275297
chr17 56468922 56469300 ZNF263 UCSC Txn Factor no Conserved 108275322
chr17 56468983 56469354 NR3C1 UCSC Txn Factor no Conserved 108275330
chr17 56468884 56468898 ZIC1 JASPAR yes 21262747
chr17 56468884 56468898 ZIC1 JASPAR yes 55017094
chr17 56468891 56468896 SP1 TRANSFAC yes 21262748
chr17 56468891 56468896 SP1 TRANSFAC yes 55017095
chr17 56468905 56468910 SP1 TRANSFAC yes 21262749
chr17 56468905 56468910 SP1 TRANSFAC yes 55017096
chr17 56468926 56468940 TCF7L2 JASPAR yes 21262750
chr17 56468926 56468940 TCF7L2 JASPAR yes 55017097
chr17 56468926 56468941 LEF1 JASPAR yes 21262751
chr17 56468926 56468941 LEF1 JASPAR yes 55017098
chr17 56468930 56468936 TCF4 TRANSFAC yes 21262752
chr17 56468930 56468936 TCF4 TRANSFAC yes 55017099
chr17 56468943 56468955 TEF JASPAR yes 21262753
chr17 56468943 56468955 TEF JASPAR yes 55017100
chr17 56468945 56468956 PHOX2A JASPAR yes 21262754
chr17 56468945 56468956 PROP1 JASPAR yes 21262755
chr17 56468945 56468956 PHOX2A JASPAR yes 55017101
chr17 56468945 56468956 PROP1 JASPAR yes 55017102
chr17 56468953 56468956 MYB TRANSFAC yes 21262756
chr17 56468953 56468956 MYB TRANSFAC yes 55017103
chr17 56468981 56468992 FOXP2 JASPAR yes 21262757
chr17 56468981 56468992 FOXP2 JASPAR yes 55017104
chr17 56468982 56468990 FOXD1 JASPAR yes 21262758
chr17 56468982 56468990 FOXO3 JASPAR yes 21262759
chr17 56468982 56468990 FOXD1 JASPAR yes 55017105
chr17 56468982 56468990 FOXO3 JASPAR yes 55017106
chr17 56468983 56468990 FOXD2 JASPAR yes 21262760
chr17 56468983 56468990 FOXI1 JASPAR yes 21262761
chr17 56468983 56468990 FOXL1 JASPAR yes 21262762
chr17 56468983 56468990 FOXO4 JASPAR yes 21262763
chr17 56468983 56468990 FOXO6 JASPAR yes 21262764
chr17 56468983 56468990 FOXP3 JASPAR yes 21262765
chr17 56468983 56468990 FOXD2 JASPAR yes 55017107
chr17 56468983 56468990 FOXI1 JASPAR yes 55017108
chr17 56468983 56468990 FOXL1 JASPAR yes 55017109
chr17 56468983 56468990 FOXO4 JASPAR yes 55017110
chr17 56468983 56468990 FOXO6 JASPAR yes 55017111
chr17 56468983 56468990 FOXP3 JASPAR yes 55017112
chr17 56468983 56468991 FOXO3 JASPAR yes 21262766
chr17 56468983 56468991 FOXO3 JASPAR yes 55017113
chr17 56468994 56469006 MYBL1 JASPAR yes 21262767
chr17 56468994 56469006 MYBL1 JASPAR yes 55017114
chr17 56468996 56469007 HOXC11 JASPAR yes 21262768
chr17 56468996 56469007 HOXC12 JASPAR yes 21262769
chr17 56468996 56469007 HOXC11 JASPAR yes 55017115
chr17 56468996 56469007 HOXC12 JASPAR yes 55017116
chr17 56468999 56469002 MYB TRANSFAC yes 21262770
chr17 56468999 56469002 MYB TRANSFAC yes 55017117
chr17 56469018 56469023 GATA1 TRANSFAC yes 21262771
chr17 56469018 56469023 GATA1 TRANSFAC yes 55017118
chr17 56469023 56469037 TLX1 JASPAR yes 21262772
chr17 56469023 56469037 TLX1 JASPAR yes 55017119
chr17 56469026 56469036 ID4 JASPAR yes 21262773
chr17 56469026 56469036 TCF4 JASPAR yes 21262774
chr17 56469026 56469036 ID4 JASPAR yes 55017120
chr17 56469026 56469036 TCF4 JASPAR yes 55017121
chr17 56469077 56469096 PAX5 JASPAR yes 21262775
chr17 56469077 56469096 PAX5 JASPAR yes 55017122
chr17 56469090 56469107 BCL6B JASPAR yes 21262776
chr17 56469090 56469107 BCL6B JASPAR yes 55017123
chr17 56469126 56469142 SOX8 JASPAR yes 21262777
chr17 56469126 56469142 SOX8 JASPAR yes 55017124
chr17 56469139 56469154 AR JASPAR yes 21262778
chr17 56469139 56469154 AR JASPAR yes 55017125
chr17 56469155 56469159 NFE TRANSFAC yes 21262779
chr17 56469155 56469159 NFE TRANSFAC yes 55017126
chr17 56469159 56469170 EBF1 JASPAR yes 21262780
chr17 56469159 56469170 EBF1 JASPAR yes 55017127
chr17 56469159 56469173 NR2F1 JASPAR yes 21262781
chr17 56469159 56469173 NR2F1 JASPAR yes 55017128
chr17 56469209 56469214 TFAP2A TRANSFAC yes 21262782
chr17 56469209 56469214 TFAP2A TRANSFAC yes 55017129
chr17 56469209 56469215 MZF1 JASPAR yes 21262783
chr17 56469209 56469215 MZF1 JASPAR yes 55017130
chr17 56469210 56469225 AR JASPAR yes 21262784
chr17 56469210 56469225 AR JASPAR yes 55017131
chr17 56469210 56469227 NR3C2 JASPAR yes 21262785
chr17 56469210 56469227 NR3C2 JASPAR yes 55017132
chr17 56469217 56469227 RELA JASPAR yes 21262786
chr17 56469217 56469227 RELA JASPAR yes 55017133
chr17 56469227 56469239 GLI2 JASPAR yes 21262787
chr17 56469227 56469239 GLI2 JASPAR yes 55017134
chr17 56469234 56469255 REST JASPAR yes 21262788
chr17 56469234 56469255 REST JASPAR yes 55017135
chr17 56469235 56469254 REST JASPAR yes 21262789
chr17 56469235 56469254 REST JASPAR yes 55017136
chr17 56469242 56469247 TFAP2A TRANSFAC yes 21262790
chr17 56469242 56469247 TFAP2A TRANSFAC yes 55017137
chr17 56469242 56469248 MZF1 JASPAR yes 21262791
chr17 56469242 56469248 MZF1 JASPAR yes 55017138
chr17 56469250 56469267 RXRA JASPAR yes 21262792
chr17 56469250 56469267 RXRA JASPAR yes 55017139
chr17 56469251 56469255 ESR1 TRANSFAC yes 21262793
chr17 56469251 56469255 ESR1 TRANSFAC yes 55017140
chr17 56469252 56469262 RORA JASPAR yes 21262794
chr17 56469252 56469262 RORA JASPAR yes 55017141
chr17 56469253 56469264 ESRRA JASPAR yes 21262795
chr17 56469253 56469264 ESRRB JASPAR yes 21262796
chr17 56469253 56469264 ESRRA JASPAR yes 55017142
chr17 56469253 56469264 ESRRB JASPAR yes 55017143
chr17 56469255 56469263 NR4A2 JASPAR yes 21262797
chr17 56469255 56469263 NR4A2 JASPAR yes 55017144
chr17 56469257 56469261 ESR1 TRANSFAC yes 21262798
chr17 56469257 56469261 ESR1 TRANSFAC yes 55017145
chr17 56469258 56469279 REST JASPAR yes 21262799
chr17 56469258 56469279 REST JASPAR yes 55017146
chr17 56469264 56469284 PPARG JASPAR yes 21262800
chr17 56469264 56469284 PPARG JASPAR yes 55017147
chr17 56469265 56469285 PPARG JASPAR yes 21262801
chr17 56469265 56469285 PPARG JASPAR yes 55017148
chr17 56469267 56469272 SP1 TRANSFAC yes 21262802
chr17 56469267 56469272 SP1 TRANSFAC yes 55017149
chr17 56469277 56469287 TFCP2 JASPAR yes 21262803
chr17 56469277 56469287 TFCP2 JASPAR yes 55017150
chr17 56469285 56469290 ETS2 TRANSFAC yes 21262804
chr17 56469285 56469290 ETS2 TRANSFAC yes 55017151
SNP sites on vista25296[chr17:56468859-56469318]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 56469113 rs2526369 T C
BCL3 EP300 FOXA1 FOXA2 GATA2 GATA3 MBD4 MXI1 MYBL2 NFIC NR3C1 POLR2A SP1 TCF12 TCF7L2 TEAD4 ZNF263
4956319
chr17 56469160 rs116190600 C T
EBF1 EP300 FOXA1 GATA2 GATA3 MBD4 MXI1 MYBL2 NFIC NR2F1 NR3C1 POLR2A SP1 TCF12 TCF7L2 TEAD4 ZNF263
4956320
Genes possibly regulated by vista25296[chr17:56468859-56469318]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 56378592 56406152 - BZRAP1 ENSG00000005379.11 56406152 0.77 0.93 16086 37293
chr17 56422539 56430454 - SUPT4H1 ENSG00000213246.2 56430454 0.63 0.99 16087 61595
chr17 56429861 56494956 - RNF43 ENSG00000108375.8 56494956 0.74 1.0 16088 74362
chr17 56497528 56565745 - HSF5 ENSG00000176160.5 56565745 0.92 0.9 16089 3573
Expression level of Genes
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miRNAs possibly regulated by vista25296[chr17:56468859-56469318]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results