EnhancerDB
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  3. vista25297[chr17:56480586-56480907]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25297[chr17:56480586-56480907]
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Tissue distribution of vista25297
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Transcription factor that possibly regulate vista25297[chr17:56480586-56480907]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 56480662 56480678 ZNF143 JASPAR yes 21262805
chr17 56480666 56480675 PITX3 JASPAR yes 21262806
chr17 56480666 56480676 GSC2 JASPAR yes 21262807
chr17 56480666 56480676 GSC JASPAR yes 21262808
chr17 56480667 56480675 RHOXF1 JASPAR yes 21262809
chr17 56480690 56480705 LEF1 JASPAR yes 21262810
chr17 56480691 56480705 TCF7L2 JASPAR yes 21262811
chr17 56480694 56480700 LEF1 TRANSFAC yes 21262812
chr17 56480694 56480700 TCF4 TRANSFAC yes 21262813
chr17 56480724 56480730 LEF1 TRANSFAC yes 21262814
chr17 56480724 56480730 TCF4 TRANSFAC yes 21262815
chr17 56480731 56480735 TEAD2 TRANSFAC yes 21262816
chr17 56480731 56480736 TBP TRANSFAC yes 21262817
chr17 56480731 56480737 TFIID TRANSFAC yes 21262818
chr17 56480733 56480742 SRY JASPAR yes 21262819
chr17 56480735 56480751 SOX4 JASPAR yes 21262820
chr17 56480736 56480751 SOX21 JASPAR yes 21262821
chr17 56480736 56480752 SOX8 JASPAR yes 21262822
chr17 56480775 56480796 ZNF263 JASPAR yes 21262823
chr17 56480788 56480806 NR3C1 JASPAR yes 21262824
chr17 56480803 56480812 NKX2-8 JASPAR yes 21262825
chr17 56480820 56480831 NFKB1 JASPAR yes 21262826
chr17 56480821 56480831 NFKB1 JASPAR yes 21262827
chr17 56480821 56480831 RELA JASPAR yes 21262828
chr17 56480821 56480831 REL JASPAR yes 21262829
chr17 56480824 56480838 EBF1 JASPAR yes 21262830
chr17 56480825 56480836 EBF1 JASPAR yes 21262831
chr17 56480825 56480839 EBF1 JASPAR yes 21262832
chr17 56480827 56480838 EBF1 JASPAR yes 21262833
chr17 56480831 56480836 TFAP2A TRANSFAC yes 21262834
chr17 56480831 56480837 MZF1 JASPAR yes 21262835
chr17 56480860 56480867 SPIB JASPAR yes 21262836
chr17 56480866 56480886 TP53 JASPAR yes 21262837
chr17 56480866 56480886 TP53 JASPAR yes 55018777
chr17 56480868 56480888 TP63 JASPAR yes 21262838
chr17 56480868 56480888 TP63 JASPAR yes 55018778
chr17 56480869 56480887 TP53 JASPAR yes 21262839
chr17 56480869 56480887 TP53 JASPAR yes 55018779
chr17 56480871 56480886 TP53 JASPAR yes 21262840
chr17 56480871 56480886 TP53 JASPAR yes 55018780
SNP sites on vista25297[chr17:56480586-56480907]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 56480828 rs78927374 C T
EBF1 NFKB1 REL RELA
4956420
Genes possibly regulated by vista25297[chr17:56480586-56480907]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 56378592 56406152 - BZRAP1 ENSG00000005379.11 56406152 0.77 0.93 16086 25566
chr17 56422539 56430454 - SUPT4H1 ENSG00000213246.2 56430454 0.63 0.99 16087 49868
chr17 56429861 56494956 - RNF43 ENSG00000108375.8 56494956 0.74 1.0 16088 85951
chr17 56497528 56565745 - HSF5 ENSG00000176160.5 56565745 0.92 0.9 16089 15162
Expression level of Genes
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miRNAs possibly regulated by vista25297[chr17:56480586-56480907]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results