EnhancerDB
  1. Home
  2. Enhancers
  3. vista2530[chr1:94581772-94581927]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2530[chr1:94581772-94581927]
Back to top
Tissue distribution of vista2530
Back to top
Transcription factor that possibly regulate vista2530[chr1:94581772-94581927]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 94581772 94581780 TBX15 JASPAR yes 30855334
chr1 94581772 94581780 TBX15 JASPAR yes 118332071
chr1 94581777 94581786 ZEB1 JASPAR yes 30855335
chr1 94581777 94581786 ZEB1 JASPAR yes 118332072
chr1 94581779 94581793 RXRB JASPAR yes 30855336
chr1 94581779 94581793 RXRB JASPAR yes 118332073
chr1 94581780 94581785 USF2 TRANSFAC yes 30855337
chr1 94581780 94581785 USF2 TRANSFAC yes 118332074
chr1 94581810 94581825 FOXP1 JASPAR yes 30855338
chr1 94581810 94581825 FOXP1 JASPAR yes 118332075
chr1 94581817 94581830 POU2F2 JASPAR yes 30855339
chr1 94581817 94581830 POU2F2 JASPAR yes 118332076
chr1 94581832 94581842 SP1 JASPAR yes 30855340
chr1 94581832 94581842 SP1 JASPAR yes 118332077
chr1 94581833 94581839 SP1 TRANSFAC yes 30855341
chr1 94581833 94581839 SP1 TRANSFAC yes 118332078
chr1 94581833 94581843 SP1 JASPAR yes 30855342
chr1 94581833 94581843 SP1 JASPAR yes 118332079
chr1 94581834 94581841 SP1 TRANSFAC yes 30855343
chr1 94581834 94581841 SP1 TRANSFAC yes 118332080
chr1 94581835 94581840 SP1 TRANSFAC yes 30855344
chr1 94581835 94581840 SP1 TRANSFAC yes 118332081
chr1 94581835 94581841 SP1 TRANSFAC yes 30855345
chr1 94581835 94581841 SP1 TRANSFAC yes 118332082
chr1 94581850 94581865 SCRT1 JASPAR yes 30855346
chr1 94581850 94581865 SCRT1 JASPAR yes 118332083
chr1 94581857 94581868 FOXH1 JASPAR yes 30855347
chr1 94581857 94581868 FOXH1 JASPAR yes 118332084
chr1 94581858 94581872 RORA JASPAR yes 30855348
chr1 94581858 94581872 RORA JASPAR yes 118332085
chr1 94581859 94581872 DUXA JASPAR yes 30855349
chr1 94581859 94581872 DUXA JASPAR yes 118332086
chr1 94581860 94581871 DUX4 JASPAR yes 30855350
chr1 94581860 94581871 DUX4 JASPAR yes 118332087
chr1 94581862 94581880 MAFF JASPAR yes 30855351
chr1 94581862 94581880 MAFF JASPAR yes 118332088
chr1 94581863 94581878 MAFK JASPAR yes 30855352
chr1 94581863 94581878 MAFK JASPAR yes 118332089
chr1 94581866 94581870 ESR1 TRANSFAC yes 30855353
chr1 94581866 94581870 ESR1 TRANSFAC yes 118332090
chr1 94581867 94581878 NRL JASPAR yes 30855354
chr1 94581867 94581878 NRL JASPAR yes 118332091
chr1 94581877 94581888 USF2 JASPAR yes 30855355
chr1 94581877 94581888 USF2 JASPAR yes 118332092
chr1 94581894 94581902 FOXO3 JASPAR yes 30855356
chr1 94581894 94581902 FOXO3 JASPAR yes 118332093
SNP sites on vista2530[chr1:94581772-94581927]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 94581796 rs72962313 C A no 492730
chr1 94581837 rs148739140 C T
SP1
492731
chr1 94581856 rs78701829 C T
SCRT1
492732
chr1 94581882 rs147449223 T C
USF2
492733
chr1 94581905 rs7535005 C T no 492734
Genes possibly regulated by vista2530[chr1:94581772-94581927]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 94458393 94586688 - ABCA4 ENSG00000198691.7 94586688 0.98 0.98 910 95239
Expression level of Genes
Back to top
miRNAs possibly regulated by vista2530[chr1:94581772-94581927]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results