EnhancerDB
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  3. vista25302[chr17:56701235-56701661]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25302[chr17:56701235-56701661]
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Tissue distribution of vista25302
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Transcription factor that possibly regulate vista25302[chr17:56701235-56701661]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 56701258 56701273 AR JASPAR yes 21262976
chr17 56701269 56701275 MYC TRANSFAC yes 21262977
chr17 56701279 56701290 DUX4 JASPAR yes 21262978
chr17 56701283 56701291 DLX6 JASPAR yes 21262979
chr17 56701283 56701291 MSX1 JASPAR yes 21262980
chr17 56701306 56701311 GATA2 JASPAR yes 21262981
chr17 56701306 56701319 HSF2 JASPAR yes 21262982
chr17 56701310 56701321 STAT3 JASPAR yes 21262983
chr17 56701310 56701325 HSF1 JASPAR yes 21262984
chr17 56701325 56701333 FOXL1 JASPAR yes 21262985
chr17 56701325 56701334 POU3F4 JASPAR yes 21262986
chr17 56701325 56701336 FOXB1 JASPAR yes 21262987
chr17 56701336 56701351 FOXA1 JASPAR yes 21262988
chr17 56701337 56701348 FOXB1 JASPAR yes 21262989
chr17 56701337 56701348 FOXC1 JASPAR yes 21262990
chr17 56701339 56701343 TEAD2 TRANSFAC yes 21262991
chr17 56701339 56701344 TBP TRANSFAC yes 21262992
chr17 56701339 56701345 TMF TRANSFAC yes 21262993
chr17 56701371 56701382 FOSL2 JASPAR yes 21262994
chr17 56701387 56701408 LUN1 TRANSFAC yes 21262995
chr17 56701404 56701418 PLAG1 JASPAR yes 21262996
chr17 56701411 56701416 SP1 TRANSFAC yes 21262997
chr17 56701412 56701417 SP1 TRANSFAC yes 21262998
chr17 56701412 56701421 THAP1 JASPAR yes 21262999
chr17 56701415 56701419 LFA1 TRANSFAC yes 21263000
chr17 56701424 56701437 NR2F1 JASPAR yes 21263001
chr17 56701426 56701444 RARA JASPAR yes 21263002
chr17 56701428 56701432 ESR1 TRANSFAC yes 21263003
chr17 56701440 56701452 YY1 JASPAR yes 21263004
chr17 56701443 56701449 YY1 JASPAR yes 21263005
chr17 56701454 56701457 MYB TRANSFAC yes 21263006
chr17 56701475 56701490 MEF2C JASPAR yes 21263007
chr17 56701476 56701491 MEF2A JASPAR yes 21263008
chr17 56701477 56701489 MEF2A JASPAR yes 21263009
chr17 56701477 56701489 MEF2B JASPAR yes 21263010
chr17 56701477 56701489 MEF2D JASPAR yes 21263011
chr17 56701554 56701568 ATF7 JASPAR yes 21263012
chr17 56701555 56701567 HLF JASPAR yes 21263013
chr17 56701556 56701566 CEBPB JASPAR yes 21263014
chr17 56701556 56701566 CEBPD JASPAR yes 21263015
chr17 56701556 56701566 CEBPE JASPAR yes 21263016
chr17 56701626 56701645 PAX5 JASPAR yes 21263017
chr17 56701646 56701657 FOXH1 JASPAR yes 21263018
SNP sites on vista25302[chr17:56701235-56701661]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 56701458 rs373550264 C T no 4956855
chr17 56701539 rs149218522 G A no 4956856
chr17 56701640 rs143372020 C T
PAX5
4956857
Genes possibly regulated by vista25302[chr17:56701235-56701661]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 56597611 56618179 - SEPT4 ENSG00000108387.10 56618179 0.88 1.0 16091 16944
chr17 56618948 56621729 - C17orf47 ENSG00000181013.3 56621729 0.82 1.0 16092 20494
chr17 56634039 56769416 - TEX14 ENSG00000121101.11 56769416 0.7 1.0 16093 32245
chr17 56769934 56811703 + RAD51C ENSG00000108384.10 56769934 0.94 0.99 16094 31727
Expression level of Genes
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miRNAs possibly regulated by vista25302[chr17:56701235-56701661]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results