EnhancerDB
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  3. vista25306[chr17:56744054-56744558]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25306[chr17:56744054-56744558]
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Tissue distribution of vista25306
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Transcription factor that possibly regulate vista25306[chr17:56744054-56744558]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 56743393 56744650 POLR2A UCSC Txn Factor no Conserved 108275572
chr17 56743705 56744208 PML UCSC Txn Factor no Conserved 108275576
chr17 56743758 56744176 TAF7 UCSC Txn Factor no Conserved 108275579
chr17 56744183 56744439 ATF1 UCSC Txn Factor no Conserved 108275600
chr17 56744195 56744437 JUND UCSC Txn Factor no Conserved 108275603
chr17 56744048 56744058 POU6F2 JASPAR yes 21263203
chr17 56744048 56744058 POU6F2 JASPAR yes 55028238
chr17 56744049 56744059 EMX1 JASPAR yes 21263204
chr17 56744049 56744059 EVX1 JASPAR yes 21263205
chr17 56744049 56744059 EVX2 JASPAR yes 21263206
chr17 56744049 56744059 HOXA2 JASPAR yes 21263207
chr17 56744049 56744059 MEOX1 JASPAR yes 21263208
chr17 56744049 56744059 MEOX2 JASPAR yes 21263209
chr17 56744049 56744059 EMX1 JASPAR yes 55028239
chr17 56744049 56744059 EVX1 JASPAR yes 55028240
chr17 56744049 56744059 EVX2 JASPAR yes 55028241
chr17 56744049 56744059 HOXA2 JASPAR yes 55028242
chr17 56744049 56744059 MEOX1 JASPAR yes 55028243
chr17 56744049 56744059 MEOX2 JASPAR yes 55028244
chr17 56744070 56744082 INSM1 JASPAR yes 21263210
chr17 56744070 56744082 INSM1 JASPAR yes 55028245
chr17 56744091 56744096 SP1 TRANSFAC yes 21263211
chr17 56744091 56744096 SP1 TRANSFAC yes 55028246
chr17 56744108 56744118 GCM2 JASPAR yes 21263212
chr17 56744108 56744118 GCM2 JASPAR yes 55028247
chr17 56744116 56744119 MYB TRANSFAC yes 21263213
chr17 56744116 56744119 MYB TRANSFAC yes 55028248
chr17 56744124 56744135 BATF JASPAR yes 21263214
chr17 56744124 56744135 BATF JASPAR yes 55028249
chr17 56744132 56744142 ALX3 JASPAR yes 21263215
chr17 56744132 56744142 GSX2 JASPAR yes 21263216
chr17 56744132 56744142 LBX2 JASPAR yes 21263217
chr17 56744132 56744142 MIXL1 JASPAR yes 21263218
chr17 56744132 56744142 ALX3 JASPAR yes 55028250
chr17 56744132 56744142 GSX2 JASPAR yes 55028251
chr17 56744132 56744142 LBX2 JASPAR yes 55028252
chr17 56744132 56744142 MIXL1 JASPAR yes 55028253
chr17 56744133 56744141 BARX1 JASPAR yes 21263219
chr17 56744133 56744141 BSX JASPAR yes 21263220
chr17 56744133 56744141 EN1 JASPAR yes 21263221
chr17 56744133 56744141 ISX JASPAR yes 21263222
chr17 56744133 56744141 LHX9 JASPAR yes 21263223
chr17 56744133 56744141 MSX1 JASPAR yes 21263224
chr17 56744133 56744141 MSX2 JASPAR yes 21263225
chr17 56744133 56744141 PRRX1 JASPAR yes 21263226
chr17 56744133 56744141 RAX2 JASPAR yes 21263227
chr17 56744133 56744141 SHOX JASPAR yes 21263228
chr17 56744133 56744141 BARX1 JASPAR yes 55028254
chr17 56744133 56744141 BSX JASPAR yes 55028255
chr17 56744133 56744141 EN1 JASPAR yes 55028256
chr17 56744133 56744141 ISX JASPAR yes 55028257
chr17 56744133 56744141 LHX9 JASPAR yes 55028258
chr17 56744133 56744141 MSX1 JASPAR yes 55028259
chr17 56744133 56744141 MSX2 JASPAR yes 55028260
chr17 56744133 56744141 PRRX1 JASPAR yes 55028261
chr17 56744133 56744141 RAX2 JASPAR yes 55028262
chr17 56744133 56744141 SHOX JASPAR yes 55028263
chr17 56744137 56744152 HNF4A JASPAR yes 21263229
chr17 56744137 56744152 HNF4A JASPAR yes 55028264
chr17 56744138 56744153 HNF4G JASPAR yes 21263230
chr17 56744138 56744153 HNF4G JASPAR yes 55028265
chr17 56744145 56744150 GATA2 JASPAR yes 21263231
chr17 56744145 56744150 GATA2 JASPAR yes 55028266
chr17 56744146 56744152 ZNF354C JASPAR yes 21263232
chr17 56744146 56744152 ZNF354C JASPAR yes 55028267
chr17 56744161 56744176 FOXP1 JASPAR yes 21263233
chr17 56744161 56744176 FOXP1 JASPAR yes 55028268
chr17 56744162 56744173 FOXA1 JASPAR yes 21263234
chr17 56744162 56744173 FOXH1 JASPAR yes 21263235
chr17 56744162 56744173 FOXA1 JASPAR yes 55028269
chr17 56744162 56744173 FOXH1 JASPAR yes 55028270
chr17 56744162 56744177 FOXA1 JASPAR yes 21263236
chr17 56744162 56744177 FOXA1 JASPAR yes 55028271
chr17 56744163 56744175 FOXC2 JASPAR yes 21263237
chr17 56744163 56744175 FOXC2 JASPAR yes 55028272
chr17 56744164 56744175 FOXP2 JASPAR yes 21263238
chr17 56744164 56744175 FOXP2 JASPAR yes 55028273
chr17 56744164 56744176 FOXI1 JASPAR yes 21263239
chr17 56744164 56744176 FOXI1 JASPAR yes 55028274
chr17 56744201 56744204 MYB TRANSFAC yes 21263240
chr17 56744201 56744204 MYB TRANSFAC yes 55028275
chr17 56744225 56744230 ETS2 TRANSFAC yes 21263241
chr17 56744225 56744230 ETS2 TRANSFAC yes 55028276
chr17 56744252 56744266 POU1F1 JASPAR yes 21263242
chr17 56744252 56744266 POU1F1 JASPAR yes 55028277
chr17 56744253 56744266 POU3F3 JASPAR yes 21263243
chr17 56744253 56744266 POU3F3 JASPAR yes 55028278
chr17 56744254 56744266 POU2F1 JASPAR yes 21263244
chr17 56744254 56744266 POU2F1 JASPAR yes 55028279
chr17 56744267 56744281 ZIC1 JASPAR yes 21263245
chr17 56744267 56744281 ZIC1 JASPAR yes 55028280
chr17 56744267 56744282 ZIC3 JASPAR yes 21263246
chr17 56744267 56744282 ZIC4 JASPAR yes 21263247
chr17 56744267 56744282 ZIC3 JASPAR yes 55028281
chr17 56744267 56744282 ZIC4 JASPAR yes 55028282
chr17 56744274 56744286 CREB1 JASPAR yes 21263248
chr17 56744274 56744286 CREB1 JASPAR yes 55028283
chr17 56744274 56744289 JUND JASPAR yes 21263249
chr17 56744274 56744289 JUND JASPAR yes 55028284
chr17 56744275 56744288 JUN JASPAR yes 21263250
chr17 56744275 56744288 JUN JASPAR yes 55028285
chr17 56744276 56744290 ATF7 JASPAR yes 21263251
chr17 56744276 56744290 BATF3 JASPAR yes 21263252
chr17 56744276 56744290 ATF7 JASPAR yes 55028286
chr17 56744276 56744290 BATF3 JASPAR yes 55028287
chr17 56744277 56744289 JDP2 JASPAR yes 21263253
chr17 56744277 56744289 JDP2 JASPAR yes 55028288
chr17 56744277 56744292 JUND JASPAR yes 21263254
chr17 56744277 56744292 JUND JASPAR yes 55028289
chr17 56744278 56744291 JUN JASPAR yes 21263255
chr17 56744278 56744291 JUN JASPAR yes 55028290
chr17 56744279 56744284 ATF1 TRANSFAC yes 21263256
chr17 56744279 56744284 ATF1 TRANSFAC yes 55028291
chr17 56744279 56744287 CREB1 JASPAR yes 21263257
chr17 56744279 56744287 CREB1 JASPAR yes 55028292
chr17 56744281 56744286 ATF1 TRANSFAC yes 21263258
chr17 56744281 56744286 ATF1 TRANSFAC yes 55028293
chr17 56744302 56744306 ESR1 TRANSFAC yes 21263259
chr17 56744302 56744306 ESR1 TRANSFAC yes 55028294
chr17 56744311 56744323 NHLH1 JASPAR yes 21263260
chr17 56744311 56744323 NHLH1 JASPAR yes 55028295
chr17 56744352 56744357 ETS2 TRANSFAC yes 21263261
chr17 56744352 56744357 ETS2 TRANSFAC yes 55028296
chr17 56744380 56744385 ATF1 TRANSFAC yes 21263262
chr17 56744380 56744385 ATF1 TRANSFAC yes 55028297
chr17 56744380 56744388 CREB1 JASPAR yes 21263263
chr17 56744380 56744388 CREB1 JASPAR yes 55028298
chr17 56744380 56744392 PKNOX1 JASPAR yes 21263264
chr17 56744380 56744392 PKNOX2 JASPAR yes 21263265
chr17 56744380 56744392 TGIF1 JASPAR yes 21263266
chr17 56744380 56744392 TGIF2 JASPAR yes 21263267
chr17 56744380 56744392 PKNOX1 JASPAR yes 55028299
chr17 56744380 56744392 PKNOX2 JASPAR yes 55028300
chr17 56744380 56744392 TGIF1 JASPAR yes 55028301
chr17 56744380 56744392 TGIF2 JASPAR yes 55028302
chr17 56744386 56744390 NFE TRANSFAC yes 21263268
chr17 56744386 56744390 NFE TRANSFAC yes 55028303
chr17 56744388 56744398 SREBF1 JASPAR yes 21263269
chr17 56744388 56744398 SREBF2 JASPAR yes 21263270
chr17 56744388 56744398 SREBF1 JASPAR yes 55028304
chr17 56744388 56744398 SREBF2 JASPAR yes 55028305
chr17 56744395 56744399 YY1 TRANSFAC yes 21263271
chr17 56744395 56744399 YY1 TRANSFAC yes 55028306
chr17 56744434 56744449 TFAP2A JASPAR yes 21263272
chr17 56744434 56744449 TFAP2C JASPAR yes 21263273
chr17 56744434 56744449 TFAP2A JASPAR yes 55028307
chr17 56744434 56744449 TFAP2C JASPAR yes 55028308
chr17 56744437 56744448 TFAP2A JASPAR yes 21263274
chr17 56744437 56744448 TFAP2B JASPAR yes 21263275
chr17 56744437 56744448 TFAP2C JASPAR yes 21263276
chr17 56744437 56744448 TFAP2A JASPAR yes 55028309
chr17 56744437 56744448 TFAP2B JASPAR yes 55028310
chr17 56744437 56744448 TFAP2C JASPAR yes 55028311
chr17 56744472 56744477 ETS2 TRANSFAC yes 21263277
chr17 56744472 56744477 ETS2 TRANSFAC yes 55028312
chr17 56744482 56744485 MYB TRANSFAC yes 21263278
chr17 56744482 56744485 MYB TRANSFAC yes 55028313
chr17 56744505 56744515 BHLHE41 JASPAR yes 21263279
chr17 56744505 56744515 TFE3 JASPAR yes 21263280
chr17 56744505 56744515 TFEB JASPAR yes 21263281
chr17 56744505 56744515 BHLHE41 JASPAR yes 55028314
chr17 56744505 56744515 TFE3 JASPAR yes 55028315
chr17 56744505 56744515 TFEB JASPAR yes 55028316
chr17 56744511 56744516 GATA2 JASPAR yes 21263282
chr17 56744511 56744516 GATA2 JASPAR yes 55028317
chr17 56744540 56744551 FLI1 JASPAR yes 21263283
chr17 56744540 56744551 FLI1 JASPAR yes 55028318
chr17 56744541 56744545 YY1 TRANSFAC yes 21263284
chr17 56744541 56744545 YY1 TRANSFAC yes 55028319
chr17 56744541 56744551 ETV6 JASPAR yes 21263285
chr17 56744541 56744551 ETV6 JASPAR yes 55028320
chr17 56744541 56744552 ETV2 JASPAR yes 21263286
chr17 56744541 56744552 ETV2 JASPAR yes 55028321
chr17 56744541 56744554 ELF1 JASPAR yes 21263287
chr17 56744541 56744554 ELF1 JASPAR yes 55028322
chr17 56744542 56744550 FEV JASPAR yes 21263288
chr17 56744542 56744550 FEV JASPAR yes 55028323
chr17 56744544 56744551 SPIB JASPAR yes 21263289
chr17 56744544 56744551 SPIB JASPAR yes 55028324
chr17 56744550 56744565 STAT1 JASPAR yes 21263290
chr17 56744550 56744565 STAT1 JASPAR yes 55028325
chr17 56744552 56744563 STAT1 JASPAR yes 21263291
chr17 56744552 56744563 STAT3 JASPAR yes 21263292
chr17 56744552 56744563 STAT1 JASPAR yes 55028326
chr17 56744552 56744563 STAT3 JASPAR yes 55028327
SNP sites on vista25306[chr17:56744054-56744558]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 56744055 rs144426810 T C
EMX1 EVX1 EVX2 HOXA2 MEOX1 MEOX2 PML POLR2A POU6F2 TAF7
4957170
chr17 56744065 rs190509357 C T
PML POLR2A TAF7
4957171
chr17 56744186 rs190779180 T C
ATF1 PML POLR2A
4957172
chr17 56744369 rs185875548 C G
ATF1 JUND POLR2A
4957173
chr17 56744387 rs113473833 C T
ATF1 CREB1 JUND NFE PKNOX1 PKNOX2 POLR2A TGIF1 TGIF2
4957174
Genes possibly regulated by vista25306[chr17:56744054-56744558]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 56634039 56769416 - TEX14 ENSG00000121101.11 56769416 0.7 1.0 16093 75142
chr17 56769934 56811703 + RAD51C ENSG00000108384.10 56769934 0.94 0.99 16094 74624
chr17 56833230 57058983 + PPM1E ENSG00000175175.4 56833230 0.95 0.95 16095 11328
Expression level of Genes
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miRNAs possibly regulated by vista25306[chr17:56744054-56744558]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results