EnhancerDB
  1. Home
  2. Enhancers
  3. vista25339[chr17:57787983-57788139]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25339[chr17:57787983-57788139]
Back to top
Tissue distribution of vista25339
Back to top
Transcription factor that possibly regulate vista25339[chr17:57787983-57788139]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 57787983 57787993 PAX3 JASPAR yes 21264734
chr17 57787983 57787993 PAX7 JASPAR yes 21264735
chr17 57787992 57787997 ETS2 TRANSFAC yes 21264736
chr17 57788050 57788054 NFE TRANSFAC yes 21264737
chr17 57788052 57788062 TFE3 JASPAR yes 21264738
chr17 57788052 57788062 TFEB JASPAR yes 21264739
chr17 57788052 57788062 TFEC JASPAR yes 21264740
chr17 57788101 57788104 MYB TRANSFAC yes 21264741
chr17 57788101 57788111 MAX JASPAR yes 21264742
chr17 57788101 57788113 HES5 JASPAR yes 21264743
chr17 57788101 57788113 HES7 JASPAR yes 21264744
chr17 57788102 57788112 CLOCK JASPAR yes 21264745
chr17 57788102 57788112 HEY1 JASPAR yes 21264746
chr17 57788102 57788112 HEY2 JASPAR yes 21264747
chr17 57788102 57788112 MAX JASPAR yes 21264748
chr17 57788102 57788112 MLXIPL JASPAR yes 21264749
chr17 57788102 57788112 MNT JASPAR yes 21264750
chr17 57788102 57788112 MYF6 JASPAR yes 21264751
chr17 57788102 57788112 SREBF2 JASPAR yes 21264752
chr17 57788103 57788113 MAX JASPAR yes 21264753
chr17 57788104 57788109 MYC TRANSFAC yes 21264754
chr17 57788104 57788109 USF1 TRANSFAC yes 21264755
chr17 57788104 57788109 USF2 TRANSFAC yes 21264756
SNP sites on vista25339[chr17:57787983-57788139]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 57788033 rs546660676 T A no 4961260
Genes possibly regulated by vista25339[chr17:57787983-57788139]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 57697219 57773671 + CLTC ENSG00000141367.7 57697219 0.74 0.99 16104 9236
chr17 57751997 57784987 - PTRH2 ENSG00000141378.13 57784987 0.88 1.0 16105 97004
chr17 57784553 57919616 + VMP1 ENSG00000062716.6 57784553 0.71 0.99 16106 96570
Expression level of Genes
Back to top
miRNAs possibly regulated by vista25339[chr17:57787983-57788139]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 57918672 57918692 + hsa-miR-21-3p MIMAT0004494 57915291 0.012936635698908048 0.710898 0.678791 730
Expression level of miRNAs
Back to top