EnhancerDB
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  3. vista25349[chr17:57853705-57854627]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25349[chr17:57853705-57854627]
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Tissue distribution of vista25349
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Transcription factor that possibly regulate vista25349[chr17:57853705-57854627]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 57854364 57854764 SETDB1 UCSC Txn Factor no Conserved 108276743
chr17 57853709 57853715 SOX10 JASPAR yes 21265427
chr17 57853709 57853715 SOX10 JASPAR yes 55080471
chr17 57853717 57853735 ESR2 JASPAR yes 21265428
chr17 57853717 57853735 ESR2 JASPAR yes 55080472
chr17 57853718 57853736 ESR2 JASPAR yes 21265429
chr17 57853718 57853736 ESR2 JASPAR yes 55080473
chr17 57853719 57853739 ESR1 JASPAR yes 21265430
chr17 57853719 57853739 ESR1 JASPAR yes 55080474
chr17 57853735 57853740 GATA1 TRANSFAC yes 21265431
chr17 57853735 57853740 GATA1 TRANSFAC yes 55080475
chr17 57853743 57853757 GATA2 JASPAR yes 21265432
chr17 57853743 57853757 GATA2 JASPAR yes 55080476
chr17 57853747 57853755 GATA3 JASPAR yes 21265433
chr17 57853747 57853755 GATA5 JASPAR yes 21265434
chr17 57853747 57853755 GATA3 JASPAR yes 55080477
chr17 57853747 57853755 GATA5 JASPAR yes 55080478
chr17 57853754 57853760 NFIC JASPAR yes 21265435
chr17 57853754 57853760 NFIC JASPAR yes 55080479
chr17 57853758 57853770 FOXI1 JASPAR yes 21265436
chr17 57853758 57853770 FOXI1 JASPAR yes 55080480
chr17 57853774 57853789 JUND JASPAR yes 21265437
chr17 57853774 57853789 JUND JASPAR yes 55080481
chr17 57853776 57853790 ATF7 JASPAR yes 21265438
chr17 57853776 57853790 BATF3 JASPAR yes 21265439
chr17 57853776 57853790 ATF7 JASPAR yes 55080482
chr17 57853776 57853790 BATF3 JASPAR yes 55080483
chr17 57853777 57853789 JDP2 JASPAR yes 21265440
chr17 57853777 57853789 JDP2 JASPAR yes 55080484
chr17 57853777 57853792 JUND JASPAR yes 21265441
chr17 57853777 57853792 JUND JASPAR yes 55080485
chr17 57853778 57853791 JUN JASPAR yes 21265442
chr17 57853778 57853791 JUN JASPAR yes 55080486
chr17 57853779 57853786 JUN TRANSFAC yes 21265443
chr17 57853779 57853786 JUN TRANSFAC yes 55080487
chr17 57853786 57853799 POU3F3 JASPAR yes 21265444
chr17 57853786 57853799 POU3F3 JASPAR yes 55080488
chr17 57853798 57853810 POU2F1 JASPAR yes 21265445
chr17 57853798 57853810 POU2F1 JASPAR yes 55080489
chr17 57853798 57853811 POU3F3 JASPAR yes 21265446
chr17 57853798 57853811 POU3F3 JASPAR yes 55080490
chr17 57853798 57853812 POU1F1 JASPAR yes 21265447
chr17 57853798 57853812 POU1F1 JASPAR yes 55080491
chr17 57853799 57853811 POU3F1 JASPAR yes 21265448
chr17 57853799 57853811 POU3F2 JASPAR yes 21265449
chr17 57853799 57853811 POU3F1 JASPAR yes 55080492
chr17 57853799 57853811 POU3F2 JASPAR yes 55080493
chr17 57853800 57853809 POU3F4 JASPAR yes 21265450
chr17 57853800 57853809 POU5F1B JASPAR yes 21265451
chr17 57853800 57853809 POU3F4 JASPAR yes 55080494
chr17 57853800 57853809 POU5F1B JASPAR yes 55080495
chr17 57853802 57853817 HNF1A JASPAR yes 21265452
chr17 57853802 57853817 HNF1A JASPAR yes 55080496
chr17 57853803 57853816 HNF1B JASPAR yes 21265453
chr17 57853803 57853816 HNF1B JASPAR yes 55080497
chr17 57853806 57853816 POU6F1 JASPAR yes 21265454
chr17 57853806 57853816 POU6F1 JASPAR yes 55080498
chr17 57853814 57853829 MEF2A JASPAR yes 21265455
chr17 57853814 57853829 MEF2A JASPAR yes 55080499
chr17 57853821 57853825 TEAD2 TRANSFAC yes 21265456
chr17 57853821 57853825 TEAD2 TRANSFAC yes 55080500
chr17 57853821 57853826 TBP TRANSFAC yes 21265457
chr17 57853821 57853826 TBP TRANSFAC yes 55080501
chr17 57853833 57853848 MEF2A JASPAR yes 21265458
chr17 57853833 57853848 MEF2A JASPAR yes 55080502
chr17 57853834 57853849 MEF2C JASPAR yes 21265459
chr17 57853834 57853849 MEF2C JASPAR yes 55080503
chr17 57853835 57853847 MEF2A JASPAR yes 21265460
chr17 57853835 57853847 MEF2B JASPAR yes 21265461
chr17 57853835 57853847 MEF2D JASPAR yes 21265462
chr17 57853835 57853847 MEF2A JASPAR yes 55080504
chr17 57853835 57853847 MEF2B JASPAR yes 55080505
chr17 57853835 57853847 MEF2D JASPAR yes 55080506
chr17 57853836 57853846 MEF2A JASPAR yes 21265463
chr17 57853836 57853846 MEF2A JASPAR yes 55080507
chr17 57853837 57853841 YY1 TRANSFAC yes 21265464
chr17 57853837 57853841 YY1 TRANSFAC yes 55080508
chr17 57853843 57853846 MYB TRANSFAC yes 21265465
chr17 57853843 57853846 MYB TRANSFAC yes 55080509
chr17 57853846 57853850 YY1 TRANSFAC yes 21265466
chr17 57853846 57853850 YY1 TRANSFAC yes 55080510
chr17 57853858 57853870 HNF1B JASPAR yes 21265467
chr17 57853858 57853870 HNF1B JASPAR yes 55080511
chr17 57853862 57853866 YY1 TRANSFAC yes 21265468
chr17 57853862 57853866 YY1 TRANSFAC yes 55080512
chr17 57853867 57853880 NR2F1 JASPAR yes 21265469
chr17 57853867 57853880 NR2F1 JASPAR yes 55080513
chr17 57853871 57853888 RARA JASPAR yes 21265470
chr17 57853871 57853888 RARA JASPAR yes 55080514
chr17 57853883 57853886 MYB TRANSFAC yes 21265471
chr17 57853883 57853886 MYB TRANSFAC yes 55080515
chr17 57853918 57853921 MYB TRANSFAC yes 21265472
chr17 57853918 57853921 MYB TRANSFAC yes 55080516
chr17 57853926 57853937 FOXP2 JASPAR yes 21265473
chr17 57853926 57853937 FOXP2 JASPAR yes 55080517
chr17 57853949 57853963 SPI1 JASPAR yes 21265474
chr17 57853949 57853963 SPI1 JASPAR yes 55080518
chr17 57853966 57853973 NKX3-1 JASPAR yes 21265475
chr17 57853966 57853973 NKX3-1 JASPAR yes 55080519
chr17 57854001 57854005 YY1 TRANSFAC yes 21265476
chr17 57854001 57854005 YY1 TRANSFAC yes 55080520
chr17 57854004 57854017 HSF4 JASPAR yes 21265477
chr17 57854004 57854017 HSF4 JASPAR yes 55080521
chr17 57854025 57854037 GRHL1 JASPAR yes 21265478
chr17 57854025 57854037 GRHL1 JASPAR yes 55080522
chr17 57854026 57854036 TFCP2 JASPAR yes 21265479
chr17 57854026 57854036 TFCP2 JASPAR yes 55080523
chr17 57854034 57854038 NFE TRANSFAC yes 21265480
chr17 57854034 57854038 NFE TRANSFAC yes 55080524
chr17 57854055 57854062 JUN TRANSFAC yes 21265481
chr17 57854055 57854062 SP1 TRANSFAC yes 21265482
chr17 57854055 57854062 JUN TRANSFAC yes 55080525
chr17 57854055 57854062 SP1 TRANSFAC yes 55080526
chr17 57854095 57854098 MYB TRANSFAC yes 21265483
chr17 57854095 57854098 MYB TRANSFAC yes 55080527
chr17 57854098 57854112 RORA JASPAR yes 21265484
chr17 57854098 57854112 RORA JASPAR yes 55080528
chr17 57854109 57854113 YY1 TRANSFAC yes 21265485
chr17 57854109 57854113 YY1 TRANSFAC yes 55080529
chr17 57854113 57854116 MYB TRANSFAC yes 21265486
chr17 57854113 57854116 MYB TRANSFAC yes 55080530
chr17 57854117 57854132 SOX21 JASPAR yes 21265487
chr17 57854117 57854132 SOX21 JASPAR yes 55080531
chr17 57854127 57854142 MEF2C JASPAR yes 21265488
chr17 57854127 57854142 MEF2C JASPAR yes 55080532
chr17 57854129 57854144 FOXP1 JASPAR yes 21265489
chr17 57854129 57854144 FOXP1 JASPAR yes 55080533
chr17 57854133 57854141 GATA3 JASPAR yes 21265490
chr17 57854133 57854141 GATA3 JASPAR yes 55080534
chr17 57854145 57854159 SPI1 JASPAR yes 21265491
chr17 57854145 57854159 SPI1 JASPAR yes 55080535
chr17 57854148 57854159 NRL JASPAR yes 21265492
chr17 57854148 57854159 NRL JASPAR yes 55080536
chr17 57854157 57854166 NKX2-8 JASPAR yes 21265493
chr17 57854157 57854166 NKX2-8 JASPAR yes 55080537
chr17 57854157 57854167 NKX2-3 JASPAR yes 21265494
chr17 57854157 57854167 NKX2-3 JASPAR yes 55080538
chr17 57854172 57854176 TEAD2 TRANSFAC yes 21265495
chr17 57854172 57854176 TEAD2 TRANSFAC yes 55080539
chr17 57854194 57854198 YY1 TRANSFAC yes 21265496
chr17 57854194 57854198 YY1 TRANSFAC yes 55080540
chr17 57854269 57854273 YY1 TRANSFAC yes 21265497
chr17 57854269 57854273 YY1 TRANSFAC yes 55080541
chr17 57854271 57854289 IRF2 JASPAR yes 21265498
chr17 57854271 57854289 IRF2 JASPAR yes 55080542
chr17 57854272 57854293 IRF1 JASPAR yes 21265499
chr17 57854272 57854293 IRF1 JASPAR yes 55080543
chr17 57854276 57854288 IRF1 JASPAR yes 21265500
chr17 57854276 57854288 IRF1 JASPAR yes 55080544
chr17 57854278 57854284 TCF4 TRANSFAC yes 21265501
chr17 57854278 57854284 TCF4 TRANSFAC yes 55080545
chr17 57854278 57854293 FOXP1 JASPAR yes 21265502
chr17 57854278 57854293 MEF2C JASPAR yes 21265503
chr17 57854278 57854293 FOXP1 JASPAR yes 55080546
chr17 57854278 57854293 MEF2C JASPAR yes 55080547
chr17 57854294 57854311 BCL6B JASPAR yes 21265504
chr17 57854294 57854311 BCL6B JASPAR yes 55080548
chr17 57854295 57854310 STAT1 JASPAR yes 21265505
chr17 57854295 57854310 STAT1 JASPAR yes 55080549
chr17 57854297 57854308 STAT1 JASPAR yes 21265506
chr17 57854297 57854308 STAT3 JASPAR yes 21265507
chr17 57854297 57854308 STAT1 JASPAR yes 55080550
chr17 57854297 57854308 STAT3 JASPAR yes 55080551
chr17 57854303 57854317 POU1F1 JASPAR yes 21265508
chr17 57854303 57854317 POU1F1 JASPAR yes 55080552
chr17 57854304 57854316 POU3F1 JASPAR yes 21265509
chr17 57854304 57854316 POU3F2 JASPAR yes 21265510
chr17 57854304 57854316 POU3F1 JASPAR yes 55080553
chr17 57854304 57854316 POU3F2 JASPAR yes 55080554
chr17 57854304 57854317 POU3F3 JASPAR yes 21265511
chr17 57854304 57854317 POU3F3 JASPAR yes 55080555
chr17 57854305 57854317 POU2F1 JASPAR yes 21265512
chr17 57854305 57854317 POU2F1 JASPAR yes 55080556
chr17 57854308 57854311 MYB TRANSFAC yes 21265513
chr17 57854308 57854311 MYB TRANSFAC yes 55080557
chr17 57854311 57854315 YY1 TRANSFAC yes 21265514
chr17 57854311 57854315 YY1 TRANSFAC yes 55080558
chr17 57854317 57854330 POU2F2 JASPAR yes 21265515
chr17 57854317 57854330 POU2F2 JASPAR yes 55080559
chr17 57854317 57854331 POU1F1 JASPAR yes 21265516
chr17 57854317 57854331 POU1F1 JASPAR yes 55080560
chr17 57854318 57854330 POU3F1 JASPAR yes 21265517
chr17 57854318 57854330 POU3F2 JASPAR yes 21265518
chr17 57854318 57854330 POU3F1 JASPAR yes 55080561
chr17 57854318 57854330 POU3F2 JASPAR yes 55080562
chr17 57854318 57854331 POU3F3 JASPAR yes 21265519
chr17 57854318 57854331 POU3F3 JASPAR yes 55080563
chr17 57854319 57854331 POU2F1 JASPAR yes 21265520
chr17 57854319 57854331 POU2F1 JASPAR yes 55080564
chr17 57854320 57854327 POU2F1 TRANSFAC yes 21265521
chr17 57854320 57854327 POU2F2C TRANSFAC yes 21265522
chr17 57854320 57854327 POU2F2 TRANSFAC yes 21265523
chr17 57854320 57854327 POU2F1 TRANSFAC yes 55080565
chr17 57854320 57854327 POU2F2C TRANSFAC yes 55080566
chr17 57854320 57854327 POU2F2 TRANSFAC yes 55080567
chr17 57854320 57854328 POU2F1 TRANSFAC yes 21265524
chr17 57854320 57854328 POU2F1 TRANSFAC yes 55080568
chr17 57854320 57854329 POU3F4 JASPAR yes 21265525
chr17 57854320 57854329 POU5F1B JASPAR yes 21265526
chr17 57854320 57854329 POU3F4 JASPAR yes 55080569
chr17 57854320 57854329 POU5F1B JASPAR yes 55080570
chr17 57854354 57854364 MZF1 JASPAR yes 21265527
chr17 57854354 57854364 MZF1 JASPAR yes 55080571
chr17 57854357 57854363 SP1 TRANSFAC yes 21265528
chr17 57854357 57854363 SP1 TRANSFAC yes 55080572
chr17 57854394 57854404 NFATC3 JASPAR yes 21265529
chr17 57854394 57854404 NFATC3 JASPAR yes 55080573
chr17 57854396 57854410 MTF1 JASPAR yes 21265530
chr17 57854396 57854410 MTF1 JASPAR yes 55080574
chr17 57854407 57854410 MYB TRANSFAC yes 21265531
chr17 57854407 57854410 MYB TRANSFAC yes 55080575
chr17 57854409 57854421 FOXI1 JASPAR yes 21265532
chr17 57854409 57854421 FOXI1 JASPAR yes 55080576
chr17 57854413 57854424 PROP1 JASPAR yes 21265533
chr17 57854413 57854424 PROP1 JASPAR yes 55080577
chr17 57854424 57854440 SOX4 JASPAR yes 21265534
chr17 57854424 57854440 SOX4 JASPAR yes 55080578
chr17 57854424 57854445 IRF1 JASPAR yes 21265535
chr17 57854424 57854445 IRF1 JASPAR yes 55080579
chr17 57854425 57854440 SOX21 JASPAR yes 21265536
chr17 57854425 57854440 SOX21 JASPAR yes 55080580
chr17 57854433 57854437 YY1 TRANSFAC yes 21265537
chr17 57854433 57854437 YY1 TRANSFAC yes 55080581
chr17 57854435 57854448 POU2F2 JASPAR yes 21265538
chr17 57854435 57854448 POU2F2 JASPAR yes 55080582
chr17 57854442 57854456 ATF7 JASPAR yes 21265539
chr17 57854442 57854456 BATF3 JASPAR yes 21265540
chr17 57854442 57854456 ATF7 JASPAR yes 55080583
chr17 57854442 57854456 BATF3 JASPAR yes 55080584
chr17 57854443 57854455 JDP2 JASPAR yes 21265541
chr17 57854443 57854455 JDP2 JASPAR yes 55080585
chr17 57854444 57854453 JUN TRANSFAC yes 21265542
chr17 57854444 57854453 JUN TRANSFAC yes 55080586
chr17 57854455 57854466 EBF1 JASPAR yes 21265543
chr17 57854455 57854466 EBF1 JASPAR yes 55080587
chr17 57854455 57854470 HSF1 JASPAR yes 21265544
chr17 57854455 57854470 HSF1 JASPAR yes 55080588
chr17 57854461 57854480 REST JASPAR yes 21265545
chr17 57854461 57854480 REST JASPAR yes 55080589
chr17 57854465 57854486 ZNF263 JASPAR yes 21265546
chr17 57854465 57854486 ZNF263 JASPAR yes 55080590
chr17 57854500 57854505 MYC TRANSFAC yes 21265547
chr17 57854500 57854505 MYC TRANSFAC yes 55080591
chr17 57854516 57854521 MYC TRANSFAC yes 21265548
chr17 57854516 57854521 MYC TRANSFAC yes 55080592
chr17 57854525 57854529 NFE TRANSFAC yes 21265549
chr17 57854525 57854529 NFE TRANSFAC yes 55080593
chr17 57854531 57854545 STAT1 JASPAR yes 21265550
chr17 57854531 57854545 STAT1 JASPAR yes 55080594
chr17 57854538 57854543 H4TF1 TRANSFAC yes 21265551
chr17 57854538 57854543 H4TF1 TRANSFAC yes 55080595
chr17 57854543 57854564 IRF1 JASPAR yes 21265552
chr17 57854543 57854564 IRF1 JASPAR yes 55080596
chr17 57854546 57854556 GABPA JASPAR yes 21265553
chr17 57854546 57854556 GABPA JASPAR yes 55080597
chr17 57854546 57854559 ELF1 JASPAR yes 21265554
chr17 57854546 57854559 ELF1 JASPAR yes 55080598
chr17 57854546 57854560 SPI1 JASPAR yes 21265555
chr17 57854546 57854560 SPIC JASPAR yes 21265556
chr17 57854546 57854560 SPI1 JASPAR yes 55080599
chr17 57854546 57854560 SPIC JASPAR yes 55080600
chr17 57854549 57854556 SPIB JASPAR yes 21265557
chr17 57854549 57854556 SPIB JASPAR yes 55080601
chr17 57854560 57854573 EOMES JASPAR yes 21265558
chr17 57854560 57854573 EOMES JASPAR yes 55080602
chr17 57854562 57854572 TBR1 JASPAR yes 21265559
chr17 57854562 57854572 TBR1 JASPAR yes 55080603
chr17 57854562 57854573 TBX20 JASPAR yes 21265560
chr17 57854562 57854573 TBX2 JASPAR yes 21265561
chr17 57854562 57854573 TBX20 JASPAR yes 55080604
chr17 57854562 57854573 TBX2 JASPAR yes 55080605
chr17 57854563 57854573 TBX21 JASPAR yes 21265562
chr17 57854563 57854573 TBX21 JASPAR yes 55080606
chr17 57854575 57854595 TP53 JASPAR yes 21265563
chr17 57854575 57854595 TP53 JASPAR yes 55080607
chr17 57854584 57854594 OLIG2 JASPAR yes 21265564
chr17 57854584 57854594 OLIG3 JASPAR yes 21265565
chr17 57854584 57854594 OLIG2 JASPAR yes 55080608
chr17 57854584 57854594 OLIG3 JASPAR yes 55080609
chr17 57854600 57854615 STAT1 JASPAR yes 21265566
chr17 57854600 57854615 STAT1 JASPAR yes 55080610
chr17 57854614 57854622 FOXC1 JASPAR yes 21265567
chr17 57854614 57854622 FOXC1 JASPAR yes 55080611
chr17 57854616 57854622 JUN TRANSFAC yes 21265568
chr17 57854616 57854622 JUN TRANSFAC yes 55080612
chr17 57854622 57854632 NFATC3 JASPAR yes 21265569
chr17 57854622 57854632 NFATC3 JASPAR yes 55080613
chr17 57854624 57854631 NFATC2 JASPAR yes 21265570
chr17 57854624 57854631 NFATC2 JASPAR yes 55080614
SNP sites on vista25349[chr17:57853705-57854627]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 57854009 rs375404061 G A
HSF4
4961672
chr17 57854157 rs16943853 G A
NKX2-3 NKX2-8 NRL SPI1
4961673
chr17 57854164 rs142317755 T C
NKX2-3 NKX2-8
4961674
chr17 57854266 rs116450673 T C no 4961675
chr17 57854420 rs6503941 G A
FOXI1 PROP1 SETDB1
4961676
chr17 57854610 rs146033751 G A
SETDB1 STAT1
4961677
Genes possibly regulated by vista25349[chr17:57853705-57854627]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 57751997 57784987 - PTRH2 ENSG00000141378.13 57784987 0.88 1.0 16105 31282
chr17 57784553 57919616 + VMP1 ENSG00000062716.6 57784553 0.71 0.99 16106 30848
Expression level of Genes
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miRNAs possibly regulated by vista25349[chr17:57853705-57854627]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 57918672 57918692 + hsa-miR-21-3p MIMAT0004494 57915291 0.02655571923398495 0.710898 0.678791 730
Expression level of miRNAs
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