EnhancerDB
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  3. vista25350[chr17:57860256-57860659]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25350[chr17:57860256-57860659]
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Tissue distribution of vista25350
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Transcription factor that possibly regulate vista25350[chr17:57860256-57860659]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 57860070 57861175 EP300 UCSC Txn Factor no Conserved 108276824
chr17 57860193 57860706 NR3C1 UCSC Txn Factor no Conserved 108276867
chr17 57860207 57860743 RPC155 UCSC Txn Factor no Conserved 108276873
chr17 57860264 57860280 SOX4 JASPAR yes 21265571
chr17 57860264 57860280 SOX4 JASPAR yes 55081290
chr17 57860276 57860291 RFX5 JASPAR yes 21265572
chr17 57860276 57860291 RFX5 JASPAR yes 55081291
chr17 57860290 57860301 FOSL2 JASPAR yes 21265573
chr17 57860290 57860301 FOSL2 JASPAR yes 55081292
chr17 57860291 57860297 YY1 JASPAR yes 21265574
chr17 57860291 57860297 YY1 JASPAR yes 55081293
chr17 57860292 57860305 SMAD2 JASPAR yes 21265575
chr17 57860292 57860305 SMAD2 JASPAR yes 55081294
chr17 57860295 57860305 TBR1 JASPAR yes 21265576
chr17 57860295 57860305 TBR1 JASPAR yes 55081295
chr17 57860296 57860306 TBX21 JASPAR yes 21265577
chr17 57860296 57860306 TBX21 JASPAR yes 55081296
chr17 57860297 57860305 MGA JASPAR yes 21265578
chr17 57860297 57860305 TBX15 JASPAR yes 21265579
chr17 57860297 57860305 TBX1 JASPAR yes 21265580
chr17 57860297 57860305 TBX4 JASPAR yes 21265581
chr17 57860297 57860305 TBX5 JASPAR yes 21265582
chr17 57860297 57860305 MGA JASPAR yes 55081297
chr17 57860297 57860305 TBX15 JASPAR yes 55081298
chr17 57860297 57860305 TBX1 JASPAR yes 55081299
chr17 57860297 57860305 TBX4 JASPAR yes 55081300
chr17 57860297 57860305 TBX5 JASPAR yes 55081301
chr17 57860297 57860306 ZEB1 JASPAR yes 21265583
chr17 57860297 57860306 ZEB1 JASPAR yes 55081302
chr17 57860297 57860309 PKNOX1 JASPAR yes 21265584
chr17 57860297 57860309 TGIF1 JASPAR yes 21265585
chr17 57860297 57860309 PKNOX1 JASPAR yes 55081303
chr17 57860297 57860309 TGIF1 JASPAR yes 55081304
chr17 57860297 57860310 ZBTB18 JASPAR yes 21265586
chr17 57860297 57860310 ZBTB18 JASPAR yes 55081305
chr17 57860298 57860308 FIGLA JASPAR yes 21265587
chr17 57860298 57860308 ID4 JASPAR yes 21265588
chr17 57860298 57860308 TCF3 JASPAR yes 21265589
chr17 57860298 57860308 TCF4 JASPAR yes 21265590
chr17 57860298 57860308 FIGLA JASPAR yes 55081306
chr17 57860298 57860308 ID4 JASPAR yes 55081307
chr17 57860298 57860308 TCF3 JASPAR yes 55081308
chr17 57860298 57860308 TCF4 JASPAR yes 55081309
chr17 57860299 57860308 SNAI2 JASPAR yes 21265591
chr17 57860299 57860308 SNAI2 JASPAR yes 55081310
chr17 57860300 57860305 USF2 TRANSFAC yes 21265592
chr17 57860300 57860305 USF2 TRANSFAC yes 55081311
chr17 57860316 57860321 SP1 TRANSFAC yes 21265593
chr17 57860316 57860321 SP1 TRANSFAC yes 55081312
chr17 57860317 57860328 TFAP2A JASPAR yes 21265594
chr17 57860317 57860328 TFAP2B JASPAR yes 21265595
chr17 57860317 57860328 TFAP2C JASPAR yes 21265596
chr17 57860317 57860328 TFAP2A JASPAR yes 55081313
chr17 57860317 57860328 TFAP2B JASPAR yes 55081314
chr17 57860317 57860328 TFAP2C JASPAR yes 55081315
chr17 57860327 57860332 SP1 TRANSFAC yes 21265597
chr17 57860327 57860332 SP1 TRANSFAC yes 55081316
chr17 57860339 57860359 ESR1 JASPAR yes 21265598
chr17 57860339 57860359 ESR1 JASPAR yes 55081317
chr17 57860340 57860344 ESR1 TRANSFAC yes 21265599
chr17 57860340 57860344 ESR1 TRANSFAC yes 55081318
chr17 57860370 57860381 CEBPB JASPAR yes 21265600
chr17 57860370 57860381 CEBPB JASPAR yes 55081319
chr17 57860371 57860384 NFKB1 JASPAR yes 21265601
chr17 57860371 57860384 NFKB2 JASPAR yes 21265602
chr17 57860371 57860384 NFKB1 JASPAR yes 55081320
chr17 57860371 57860384 NFKB2 JASPAR yes 55081321
chr17 57860379 57860389 SP1 JASPAR yes 21265603
chr17 57860379 57860389 SP1 JASPAR yes 55081322
chr17 57860391 57860397 TBP TRANSFAC yes 21265604
chr17 57860391 57860397 TBP TRANSFAC yes 55081323
chr17 57860403 57860422 PAX5 JASPAR yes 21265605
chr17 57860403 57860422 PAX5 JASPAR yes 55081324
chr17 57860412 57860422 SP1 JASPAR yes 21265606
chr17 57860412 57860422 SP1 JASPAR yes 55081325
chr17 57860422 57860427 SP1 TRANSFAC yes 21265607
chr17 57860422 57860427 SP1 TRANSFAC yes 55081326
chr17 57860450 57860471 ZNF263 JASPAR yes 21265608
chr17 57860450 57860471 ZNF263 JASPAR yes 55081327
chr17 57860493 57860507 JUN JASPAR yes 21265609
chr17 57860493 57860507 JUN JASPAR yes 55081328
chr17 57860496 57860507 JUNB JASPAR yes 21265610
chr17 57860496 57860507 JUNB JASPAR yes 55081329
chr17 57860497 57860508 FOSL1 JASPAR yes 21265611
chr17 57860497 57860508 FOSL1 JASPAR yes 55081330
chr17 57860529 57860548 PAX5 JASPAR yes 21265612
chr17 57860529 57860548 PAX5 JASPAR yes 55081331
chr17 57860549 57860553 NFE TRANSFAC yes 21265613
chr17 57860549 57860553 NFE TRANSFAC yes 55081332
chr17 57860553 57860568 FOXP1 JASPAR yes 21265614
chr17 57860553 57860568 FOXP1 JASPAR yes 55081333
chr17 57860554 57860575 IRF1 JASPAR yes 21265615
chr17 57860554 57860575 IRF1 JASPAR yes 55081334
chr17 57860556 57860567 FOXP2 JASPAR yes 21265616
chr17 57860556 57860567 FOXP2 JASPAR yes 55081335
chr17 57860558 57860579 IRF1 JASPAR yes 21265617
chr17 57860558 57860579 IRF1 JASPAR yes 55081336
chr17 57860564 57860582 NR3C1 JASPAR yes 21265618
chr17 57860564 57860582 NR3C1 JASPAR yes 55081337
chr17 57860572 57860587 RFX5 JASPAR yes 21265619
chr17 57860572 57860587 RFX5 JASPAR yes 55081338
chr17 57860577 57860588 CEBPA JASPAR yes 21265620
chr17 57860577 57860588 CEBPA JASPAR yes 55081339
chr17 57860578 57860589 CEBPB JASPAR yes 21265621
chr17 57860578 57860589 CEBPB JASPAR yes 55081340
chr17 57860582 57860591 SRY JASPAR yes 21265622
chr17 57860582 57860591 SRY JASPAR yes 55081341
chr17 57860585 57860600 SOX21 JASPAR yes 21265623
chr17 57860585 57860600 SOX21 JASPAR yes 55081342
chr17 57860589 57860604 FOXA1 JASPAR yes 21265624
chr17 57860589 57860604 FOXA1 JASPAR yes 55081343
chr17 57860590 57860605 FOXP1 JASPAR yes 21265625
chr17 57860590 57860605 FOXP1 JASPAR yes 55081344
chr17 57860591 57860602 FOXP2 JASPAR yes 21265626
chr17 57860591 57860602 FOXP2 JASPAR yes 55081345
chr17 57860591 57860603 FOXC2 JASPAR yes 21265627
chr17 57860591 57860603 FOXC2 JASPAR yes 55081346
chr17 57860591 57860605 FOXF2 JASPAR yes 21265628
chr17 57860591 57860605 FOXF2 JASPAR yes 55081347
chr17 57860592 57860603 FOXB1 JASPAR yes 21265629
chr17 57860592 57860603 FOXC1 JASPAR yes 21265630
chr17 57860592 57860603 FOXB1 JASPAR yes 55081348
chr17 57860592 57860603 FOXC1 JASPAR yes 55081349
chr17 57860593 57860597 YY1 TRANSFAC yes 21265631
chr17 57860593 57860597 YY1 TRANSFAC yes 55081350
chr17 57860593 57860604 FOXA1 JASPAR yes 21265632
chr17 57860593 57860604 FOXA1 JASPAR yes 55081351
chr17 57860596 57860603 NKX3-1 JASPAR yes 21265633
chr17 57860596 57860603 NKX3-1 JASPAR yes 55081352
chr17 57860601 57860611 TEAD1 JASPAR yes 21265634
chr17 57860601 57860611 TEAD4 JASPAR yes 21265635
chr17 57860601 57860611 TEAD1 JASPAR yes 55081353
chr17 57860601 57860611 TEAD4 JASPAR yes 55081354
chr17 57860617 57860626 VENTX JASPAR yes 21265636
chr17 57860617 57860626 VENTX JASPAR yes 55081355
chr17 57860646 57860658 INSM1 JASPAR yes 21265637
chr17 57860646 57860658 INSM1 JASPAR yes 55081356
chr17 57860646 57860660 E2F7 JASPAR yes 21265638
chr17 57860646 57860660 E2F7 JASPAR yes 55081357
chr17 57860648 57860658 MZF1 JASPAR yes 21265639
chr17 57860648 57860658 MZF1 JASPAR yes 55081358
SNP sites on vista25350[chr17:57860256-57860659]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 57860381 rs113797688 C T
CEBPB EP300 NFKB1 NFKB2 NR3C1 RPC155 SP1
4961732
chr17 57860432 rs550702108 C T
EP300 NR3C1 RPC155
4961733
chr17 57860514 rs139157516 G A
EP300 NR3C1 RPC155
4961734
Genes possibly regulated by vista25350[chr17:57860256-57860659]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 57751997 57784987 - PTRH2 ENSG00000141378.13 57784987 0.88 1.0 16105 24731
chr17 57784553 57919616 + VMP1 ENSG00000062716.6 57784553 0.71 0.99 16106 24297
Expression level of Genes
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miRNAs possibly regulated by vista25350[chr17:57860256-57860659]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 57918672 57918692 + hsa-miR-21-3p MIMAT0004494 57915291 0.02951249081882782 0.710898 0.678791 730
Expression level of miRNAs
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