EnhancerDB
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  3. vista25354[chr17:57866887-57867071]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25354[chr17:57866887-57867071]
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Tissue distribution of vista25354
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Transcription factor that possibly regulate vista25354[chr17:57866887-57867071]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 57866886 57866901 FOXP1 JASPAR yes 21266051
chr17 57866886 57866901 FOXP1 JASPAR yes 55082558
chr17 57866908 57866913 MYB TRANSFAC yes 21266052
chr17 57866908 57866913 MYB TRANSFAC yes 55082559
chr17 57866930 57866944 SPIC JASPAR yes 21266053
chr17 57866930 57866944 SPIC JASPAR yes 55082560
chr17 57866931 57866949 IRF2 JASPAR yes 21266054
chr17 57866931 57866949 IRF2 JASPAR yes 55082561
chr17 57866932 57866946 PAX6 JASPAR yes 21266055
chr17 57866932 57866946 PAX6 JASPAR yes 55082562
chr17 57866959 57866974 HNF1A JASPAR yes 21266056
chr17 57866959 57866974 HNF1A JASPAR yes 55082563
chr17 57866960 57866973 HNF1B JASPAR yes 21266057
chr17 57866960 57866973 HNF1B JASPAR yes 55082564
chr17 57866969 57866972 MYB TRANSFAC yes 21266058
chr17 57866969 57866972 MYB TRANSFAC yes 55082565
chr17 57866970 57866982 POU2F1 JASPAR yes 21266059
chr17 57866970 57866982 POU2F1 JASPAR yes 55082566
chr17 57866970 57866983 POU3F3 JASPAR yes 21266060
chr17 57866970 57866983 POU3F3 JASPAR yes 55082567
chr17 57866970 57866984 POU1F1 JASPAR yes 21266061
chr17 57866970 57866984 POU1F1 JASPAR yes 55082568
chr17 57866993 57866999 LEF1 TRANSFAC yes 21266062
chr17 57866993 57866999 SOX10 JASPAR yes 21266063
chr17 57866993 57866999 LEF1 TRANSFAC yes 55082569
chr17 57866993 57866999 SOX10 JASPAR yes 55082570
chr17 57866999 57867003 TEAD2 TRANSFAC yes 21266064
chr17 57866999 57867003 TEAD2 TRANSFAC yes 55082571
chr17 57866999 57867017 MAFF JASPAR yes 21266065
chr17 57866999 57867017 MAFF JASPAR yes 55082572
chr17 57867000 57867009 NKX3-2 JASPAR yes 21266066
chr17 57867000 57867009 NKX3-2 JASPAR yes 55082573
chr17 57867001 57867012 NRL JASPAR yes 21266067
chr17 57867001 57867012 NRL JASPAR yes 55082574
chr17 57867001 57867016 MAFK JASPAR yes 21266068
chr17 57867001 57867016 MAFK JASPAR yes 55082575
chr17 57867040 57867057 BCL6B JASPAR yes 21266069
chr17 57867040 57867057 BCL6B JASPAR yes 55082576
chr17 57867065 57867078 POU3F3 JASPAR yes 21266070
chr17 57867065 57867078 POU3F3 JASPAR yes 55082577
chr17 57867066 57867078 POU3F1 JASPAR yes 21266071
chr17 57867066 57867078 POU3F1 JASPAR yes 55082578
SNP sites on vista25354[chr17:57866887-57867071]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 57867005 rs192667989 G A
MAFF MAFK NKX3-2 NRL
4961786
chr17 57867006 rs182398764 T A
MAFF MAFK NKX3-2 NRL
4961787
Genes possibly regulated by vista25354[chr17:57866887-57867071]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 57751997 57784987 - PTRH2 ENSG00000141378.13 57784987 0.88 1.0 16105 18100
chr17 57784553 57919616 + VMP1 ENSG00000062716.6 57784553 0.71 0.99 16106 17666
Expression level of Genes
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miRNAs possibly regulated by vista25354[chr17:57866887-57867071]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 57918672 57918692 + hsa-miR-21-3p MIMAT0004494 57915291 0.033363679108434456 0.710898 0.678791 730
Expression level of miRNAs
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