EnhancerDB
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  3. vista25355[chr17:57869540-57869779]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25355[chr17:57869540-57869779]
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Tissue distribution of vista25355
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Transcription factor that possibly regulate vista25355[chr17:57869540-57869779]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 57869412 57870024 EP300 UCSC Txn Factor no Conserved 108277553
chr17 57869498 57869962 TCF12 UCSC Txn Factor no Conserved 108277556
chr17 57869562 57869575 NR2F1 JASPAR yes 21266072
chr17 57869562 57869575 NR2F1 JASPAR yes 55083010
chr17 57869566 57869570 ESR1 TRANSFAC yes 21266073
chr17 57869566 57869570 ESR1 TRANSFAC yes 55083011
chr17 57869576 57869586 POU6F2 JASPAR yes 21266074
chr17 57869576 57869586 POU6F2 JASPAR yes 55083012
chr17 57869588 57869594 YY1 JASPAR yes 21266075
chr17 57869588 57869594 YY1 JASPAR yes 55083013
chr17 57869629 57869633 NFE TRANSFAC yes 21266076
chr17 57869629 57869633 NFE TRANSFAC yes 55083014
chr17 57869634 57869648 ONECUT2 JASPAR yes 21266077
chr17 57869634 57869648 ONECUT3 JASPAR yes 21266078
chr17 57869634 57869648 ONECUT2 JASPAR yes 55083015
chr17 57869634 57869648 ONECUT3 JASPAR yes 55083016
chr17 57869637 57869652 MEF2C JASPAR yes 21266079
chr17 57869637 57869652 MEF2C JASPAR yes 55083017
chr17 57869649 57869654 NFY TRANSFAC yes 21266080
chr17 57869649 57869654 NFY TRANSFAC yes 55083018
chr17 57869667 57869683 SOX4 JASPAR yes 21266081
chr17 57869667 57869683 SOX4 JASPAR yes 55083019
chr17 57869668 57869683 SOX21 JASPAR yes 21266082
chr17 57869668 57869683 SOX21 JASPAR yes 55083020
chr17 57869668 57869684 SOX4 JASPAR yes 21266083
chr17 57869668 57869684 SOX4 JASPAR yes 55083021
chr17 57869675 57869690 FOXA1 JASPAR yes 21266084
chr17 57869675 57869690 FOXA1 JASPAR yes 55083022
chr17 57869677 57869689 FOXC2 JASPAR yes 21266085
chr17 57869677 57869689 FOXC2 JASPAR yes 55083023
chr17 57869678 57869689 FOXB1 JASPAR yes 21266086
chr17 57869678 57869689 FOXC1 JASPAR yes 21266087
chr17 57869678 57869689 FOXB1 JASPAR yes 55083024
chr17 57869678 57869689 FOXC1 JASPAR yes 55083025
chr17 57869679 57869690 FOXA1 JASPAR yes 21266088
chr17 57869679 57869690 FOXA1 JASPAR yes 55083026
chr17 57869685 57869689 YY1 TRANSFAC yes 21266089
chr17 57869685 57869689 YY1 TRANSFAC yes 55083027
chr17 57869685 57869700 STAT1 JASPAR yes 21266090
chr17 57869685 57869700 STAT1 JASPAR yes 55083028
chr17 57869685 57869702 ZNF410 JASPAR yes 21266091
chr17 57869685 57869702 ZNF410 JASPAR yes 55083029
chr17 57869687 57869698 STAT1 JASPAR yes 21266092
chr17 57869687 57869698 STAT1 JASPAR yes 55083030
chr17 57869705 57869720 LEF1 JASPAR yes 21266093
chr17 57869705 57869720 LEF1 JASPAR yes 55083031
chr17 57869709 57869713 YY1 TRANSFAC yes 21266094
chr17 57869709 57869713 YY1 TRANSFAC yes 55083032
chr17 57869720 57869725 ETS2 TRANSFAC yes 21266095
chr17 57869720 57869725 ETS2 TRANSFAC yes 55083033
chr17 57869723 57869729 LEF1 TRANSFAC yes 21266096
chr17 57869723 57869729 SOX10 JASPAR yes 21266097
chr17 57869723 57869729 LEF1 TRANSFAC yes 55083034
chr17 57869723 57869729 SOX10 JASPAR yes 55083035
chr17 57869723 57869738 FOXP1 JASPAR yes 21266098
chr17 57869723 57869738 FOXP1 JASPAR yes 55083036
chr17 57869724 57869733 SRY JASPAR yes 21266099
chr17 57869724 57869733 SRY JASPAR yes 55083037
chr17 57869724 57869735 FOXP2 JASPAR yes 21266100
chr17 57869724 57869735 FOXP2 JASPAR yes 55083038
chr17 57869726 57869734 FOXO3 JASPAR yes 21266101
chr17 57869726 57869734 FOXO3 JASPAR yes 55083039
chr17 57869735 57869741 MYC TRANSFAC yes 21266102
chr17 57869735 57869741 MYC TRANSFAC yes 55083040
chr17 57869740 57869755 STAT2 JASPAR yes 21266103
chr17 57869740 57869755 STAT2 JASPAR yes 55083041
chr17 57869741 57869755 STAT1 JASPAR yes 21266104
chr17 57869741 57869755 STAT1 JASPAR yes 55083042
chr17 57869742 57869753 ETV2 JASPAR yes 21266105
chr17 57869742 57869753 ETV2 JASPAR yes 55083043
chr17 57869748 57869752 NFE TRANSFAC yes 21266106
chr17 57869748 57869752 NFE TRANSFAC yes 55083044
SNP sites on vista25355[chr17:57869540-57869779]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 57869638 rs143092346 A G
EP300 MEF2C ONECUT2 ONECUT3 TCF12
4961806
chr17 57869645 rs531186978 A G
EP300 MEF2C ONECUT2 ONECUT3 TCF12
4961807
chr17 57869664 rs75787422 C T
EP300 TCF12
4961808
Genes possibly regulated by vista25355[chr17:57869540-57869779]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 57751997 57784987 - PTRH2 ENSG00000141378.13 57784987 0.88 1.0 16105 15447
chr17 57784553 57919616 + VMP1 ENSG00000062716.6 57784553 0.71 0.99 16106 15013
Expression level of Genes
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miRNAs possibly regulated by vista25355[chr17:57869540-57869779]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 57918672 57918692 + hsa-miR-21-3p MIMAT0004494 57915291 0.03525407245319718 0.710898 0.678791 730
Expression level of miRNAs
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