EnhancerDB
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  3. vista25358[chr17:57882537-57882682]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25358[chr17:57882537-57882682]
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Tissue distribution of vista25358
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Transcription factor that possibly regulate vista25358[chr17:57882537-57882682]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 57882524 57882539 AR JASPAR yes 21266271
chr17 57882524 57882539 AR JASPAR yes 55085244
chr17 57882565 57882581 POU4F2 JASPAR yes 21266272
chr17 57882565 57882581 POU4F2 JASPAR yes 55085246
chr17 57882567 57882572 GATA2 JASPAR yes 21266273
chr17 57882567 57882572 GATA2 JASPAR yes 55085247
chr17 57882568 57882578 HMBOX1 JASPAR yes 21266274
chr17 57882568 57882578 HMBOX1 JASPAR yes 55085248
chr17 57882570 57882573 MYB TRANSFAC yes 21266275
chr17 57882570 57882573 MYB TRANSFAC yes 55085249
chr17 57882572 57882582 GSX1 JASPAR yes 21266276
chr17 57882572 57882582 GSX1 JASPAR yes 55085250
chr17 57882597 57882610 HSF4 JASPAR yes 21266277
chr17 57882597 57882610 HSF4 JASPAR yes 55085251
chr17 57882610 57882625 FOXP1 JASPAR yes 21266278
chr17 57882610 57882625 FOXP1 JASPAR yes 55085252
chr17 57882628 57882638 EMX1 JASPAR yes 21266279
chr17 57882628 57882638 EN2 JASPAR yes 21266280
chr17 57882628 57882638 GBX1 JASPAR yes 21266281
chr17 57882628 57882638 GBX2 JASPAR yes 21266282
chr17 57882628 57882638 EMX1 JASPAR yes 55085253
chr17 57882628 57882638 EN2 JASPAR yes 55085254
chr17 57882628 57882638 GBX1 JASPAR yes 55085255
chr17 57882628 57882638 GBX2 JASPAR yes 55085256
chr17 57882629 57882637 BARX1 JASPAR yes 21266283
chr17 57882629 57882637 EN1 JASPAR yes 21266284
chr17 57882629 57882637 ISL2 JASPAR yes 21266285
chr17 57882629 57882637 MSX1 JASPAR yes 21266286
chr17 57882629 57882637 MSX2 JASPAR yes 21266287
chr17 57882629 57882637 PDX1 JASPAR yes 21266288
chr17 57882629 57882637 BARX1 JASPAR yes 55085257
chr17 57882629 57882637 EN1 JASPAR yes 55085258
chr17 57882629 57882637 ISL2 JASPAR yes 55085259
chr17 57882629 57882637 MSX1 JASPAR yes 55085260
chr17 57882629 57882637 MSX2 JASPAR yes 55085261
chr17 57882629 57882637 PDX1 JASPAR yes 55085262
chr17 57882652 57882670 SRF JASPAR yes 21266289
chr17 57882652 57882670 SRF JASPAR yes 55085263
chr17 57882653 57882671 SRF JASPAR yes 21266290
chr17 57882653 57882671 SRF JASPAR yes 55085264
chr17 57882668 57882680 YY1 JASPAR yes 21266291
chr17 57882668 57882680 YY1 JASPAR yes 55085265
chr17 57882678 57882692 XBP1 JASPAR yes 21266292
chr17 57882678 57882692 XBP1 JASPAR yes 55085266
SNP sites on vista25358[chr17:57882537-57882682]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 57882674 rs7216675 T C
YY1
4961951
chr17 57882679 rs55801023 C A
XBP1 YY1
4961952
Genes possibly regulated by vista25358[chr17:57882537-57882682]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 57751997 57784987 - PTRH2 ENSG00000141378.13 57784987 0.88 1.0 16105 2450
chr17 57784553 57919616 + VMP1 ENSG00000062716.6 57784553 0.71 0.99 16106 2016
chr17 57936851 57970304 - TUBD1 ENSG00000108423.10 57970304 0.67 0.99 16107 12378
chr17 57970447 58027925 + RPS6KB1 ENSG00000108443.9 57970447 0.59 0.98 16108 12235
Expression level of Genes
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miRNAs possibly regulated by vista25358[chr17:57882537-57882682]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 57918672 57918692 + hsa-miR-21-3p MIMAT0004494 57915291 0.04854510254879984 0.710898 0.678791 730
Expression level of miRNAs
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