EnhancerDB
  1. Home
  2. Enhancers
  3. vista25360[chr17:57902814-57903248]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25360[chr17:57902814-57903248]
Back to top
Tissue distribution of vista25360
Back to top
Transcription factor that possibly regulate vista25360[chr17:57902814-57903248]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 57902789 57903611 STAT3 UCSC Txn Factor no Conserved 108277783
chr17 57902844 57903200 EP300 UCSC Txn Factor no Conserved 108277793
chr17 57902860 57903277 NR3C1 UCSC Txn Factor no Conserved 108277795
chr17 57902999 57903132 FOXA1 UCSC Txn Factor no Conserved 108277833
chr17 57902810 57902814 YY1 TRANSFAC yes 21266347
chr17 57902810 57902814 YY1 TRANSFAC yes 55086003
chr17 57902826 57902829 MYB TRANSFAC yes 21266348
chr17 57902826 57902829 MYB TRANSFAC yes 55086004
chr17 57902836 57902839 MYB TRANSFAC yes 21266349
chr17 57902836 57902839 MYB TRANSFAC yes 55086005
chr17 57902873 57902887 E2F7 JASPAR yes 21266350
chr17 57902873 57902887 E2F7 JASPAR yes 55086006
chr17 57902874 57902886 E2F8 JASPAR yes 21266351
chr17 57902874 57902886 E2F8 JASPAR yes 55086007
chr17 57902876 57902894 SRF JASPAR yes 21266352
chr17 57902876 57902894 SRF JASPAR yes 55086008
chr17 57902878 57902894 SRF JASPAR yes 21266353
chr17 57902878 57902894 SRF JASPAR yes 55086009
chr17 57902881 57902893 SRF JASPAR yes 21266354
chr17 57902881 57902893 SRF JASPAR yes 55086010
chr17 57902883 57902897 SPI1 JASPAR yes 21266355
chr17 57902883 57902897 SPI1 JASPAR yes 55086011
chr17 57902894 57902904 NFKB1 JASPAR yes 21266356
chr17 57902894 57902904 RELA JASPAR yes 21266357
chr17 57902894 57902904 NFKB1 JASPAR yes 55086012
chr17 57902894 57902904 RELA JASPAR yes 55086013
chr17 57902895 57902912 BCL6B JASPAR yes 21266358
chr17 57902895 57902912 BCL6B JASPAR yes 55086014
chr17 57902896 57902911 STAT1 JASPAR yes 21266359
chr17 57902896 57902911 STAT1 JASPAR yes 55086015
chr17 57902898 57902909 STAT1 JASPAR yes 21266360
chr17 57902898 57902909 STAT3 JASPAR yes 21266361
chr17 57902898 57902909 STAT1 JASPAR yes 55086016
chr17 57902898 57902909 STAT3 JASPAR yes 55086017
chr17 57902910 57902913 MYB TRANSFAC yes 21266362
chr17 57902910 57902913 MYB TRANSFAC yes 55086018
chr17 57902913 57902917 YY1 TRANSFAC yes 21266363
chr17 57902913 57902917 YY1 TRANSFAC yes 55086019
chr17 57902936 57902948 BHLHE23 JASPAR yes 21266364
chr17 57902936 57902948 BHLHE23 JASPAR yes 55086020
chr17 57902937 57902947 BHLHE22 JASPAR yes 21266365
chr17 57902937 57902947 NEUROD2 JASPAR yes 21266366
chr17 57902937 57902947 OLIG1 JASPAR yes 21266367
chr17 57902937 57902947 OLIG2 JASPAR yes 21266368
chr17 57902937 57902947 OLIG3 JASPAR yes 21266369
chr17 57902937 57902947 BHLHE22 JASPAR yes 55086021
chr17 57902937 57902947 NEUROD2 JASPAR yes 55086022
chr17 57902937 57902947 OLIG1 JASPAR yes 55086023
chr17 57902937 57902947 OLIG2 JASPAR yes 55086024
chr17 57902937 57902947 OLIG3 JASPAR yes 55086025
chr17 57902952 57902966 TLX1 JASPAR yes 21266370
chr17 57902952 57902966 TLX1 JASPAR yes 55086026
chr17 57902960 57902974 TLX1 JASPAR yes 21266371
chr17 57902960 57902974 TLX1 JASPAR yes 55086027
chr17 57902961 57902975 TLX1 JASPAR yes 21266372
chr17 57902961 57902975 TLX1 JASPAR yes 55086028
chr17 57902964 57902979 RFX5 JASPAR yes 21266373
chr17 57902964 57902979 RFX5 JASPAR yes 55086029
chr17 57902976 57902991 STAT1 JASPAR yes 21266374
chr17 57902976 57902991 STAT1 JASPAR yes 55086030
chr17 57902978 57902989 STAT3 JASPAR yes 21266375
chr17 57902978 57902989 STAT3 JASPAR yes 55086031
chr17 57902984 57902999 HNF4G JASPAR yes 21266376
chr17 57902984 57902999 HNF4G JASPAR yes 55086032
chr17 57902985 57903000 HNF4A JASPAR yes 21266377
chr17 57902985 57903000 HNF4A JASPAR yes 55086033
chr17 57902989 57902995 SOX10 JASPAR yes 21266378
chr17 57902989 57902995 SOX10 JASPAR yes 55086034
chr17 57902995 57903001 MZF1 JASPAR yes 21266379
chr17 57902995 57903001 MZF1 JASPAR yes 55086035
chr17 57903004 57903015 RUNX1 JASPAR yes 21266380
chr17 57903004 57903015 RUNX1 JASPAR yes 55086036
chr17 57903019 57903029 NFATC3 JASPAR yes 21266381
chr17 57903019 57903029 NFATC3 JASPAR yes 55086037
chr17 57903026 57903039 DUXA JASPAR yes 21266382
chr17 57903026 57903039 DUXA JASPAR yes 55086038
chr17 57903027 57903030 MYB TRANSFAC yes 21266383
chr17 57903027 57903030 MYB TRANSFAC yes 55086039
chr17 57903027 57903038 DUX4 JASPAR yes 21266384
chr17 57903027 57903038 PHOX2A JASPAR yes 21266385
chr17 57903027 57903038 DUX4 JASPAR yes 55086040
chr17 57903027 57903038 PHOX2A JASPAR yes 55086041
chr17 57903028 57903040 PBX1 JASPAR yes 21266386
chr17 57903028 57903040 PBX1 JASPAR yes 55086042
chr17 57903037 57903042 MYB TRANSFAC yes 21266387
chr17 57903037 57903042 MYB TRANSFAC yes 55086043
chr17 57903037 57903048 ESRRB JASPAR yes 21266388
chr17 57903037 57903048 ESRRB JASPAR yes 55086044
chr17 57903052 57903072 RREB1 JASPAR yes 21266389
chr17 57903052 57903072 RREB1 JASPAR yes 55086045
chr17 57903062 57903076 E2F7 JASPAR yes 21266390
chr17 57903062 57903076 E2F7 JASPAR yes 55086046
chr17 57903081 57903092 HOXC13 JASPAR yes 21266391
chr17 57903081 57903092 HOXC13 JASPAR yes 55086047
chr17 57903089 57903106 NR3C1 JASPAR yes 21266392
chr17 57903089 57903106 NR3C2 JASPAR yes 21266393
chr17 57903089 57903106 NR3C1 JASPAR yes 55086048
chr17 57903089 57903106 NR3C2 JASPAR yes 55086049
chr17 57903089 57903107 NR3C1 JASPAR yes 21266394
chr17 57903089 57903107 NR3C1 JASPAR yes 55086050
chr17 57903091 57903104 HSF1 JASPAR yes 21266395
chr17 57903091 57903104 HSF1 JASPAR yes 55086051
chr17 57903091 57903106 AR JASPAR yes 21266396
chr17 57903091 57903106 AR JASPAR yes 55086052
chr17 57903113 57903119 TCF4 TRANSFAC yes 21266397
chr17 57903113 57903119 TCF4 TRANSFAC yes 55086053
chr17 57903118 57903122 NFE TRANSFAC yes 21266398
chr17 57903118 57903122 NFE TRANSFAC yes 55086054
chr17 57903126 57903130 YY1 TRANSFAC yes 21266399
chr17 57903126 57903130 YY1 TRANSFAC yes 55086055
chr17 57903137 57903140 MYB TRANSFAC yes 21266400
chr17 57903137 57903140 MYB TRANSFAC yes 55086056
chr17 57903141 57903155 PAX6 JASPAR yes 21266401
chr17 57903141 57903155 PAX6 JASPAR yes 55086057
chr17 57903145 57903158 NR2F1 JASPAR yes 21266402
chr17 57903145 57903158 NR2F1 JASPAR yes 55086058
chr17 57903149 57903157 CREB1 JASPAR yes 21266403
chr17 57903149 57903157 CREB1 JASPAR yes 55086059
chr17 57903186 57903190 YY1 TRANSFAC yes 21266404
chr17 57903186 57903190 YY1 TRANSFAC yes 55086060
chr17 57903189 57903199 HMBOX1 JASPAR yes 21266405
chr17 57903189 57903199 HMBOX1 JASPAR yes 55086061
chr17 57903191 57903194 MYB TRANSFAC yes 21266406
chr17 57903191 57903194 MYB TRANSFAC yes 55086062
chr17 57903194 57903206 HNF1B JASPAR yes 21266407
chr17 57903194 57903206 HNF1B JASPAR yes 55086063
chr17 57903195 57903206 JUNB JASPAR yes 21266408
chr17 57903195 57903206 JUNB JASPAR yes 55086064
chr17 57903196 57903207 FOSL1 JASPAR yes 21266409
chr17 57903196 57903207 JUND JASPAR yes 21266410
chr17 57903196 57903207 FOSL1 JASPAR yes 55086065
chr17 57903196 57903207 JUND JASPAR yes 55086066
chr17 57903198 57903204 JUN TRANSFAC yes 21266411
chr17 57903198 57903204 JUN TRANSFAC yes 55086067
chr17 57903199 57903210 CDX2 JASPAR yes 21266412
chr17 57903199 57903210 CDX2 JASPAR yes 55086068
chr17 57903200 57903211 HOXA10 JASPAR yes 21266413
chr17 57903200 57903211 HOXA10 JASPAR yes 55086069
chr17 57903201 57903210 CDX1 JASPAR yes 21266414
chr17 57903201 57903210 CDX1 JASPAR yes 55086070
chr17 57903234 57903239 GATA2 JASPAR yes 21266415
chr17 57903234 57903239 GATA2 JASPAR yes 55086071
chr17 57903246 57903256 NFATC3 JASPAR yes 21266416
chr17 57903246 57903256 NFATC3 JASPAR yes 55086072
SNP sites on vista25360[chr17:57902814-57903248]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 57903041 rs7213697 G C
EP300 ESRRB FOXA1 MYB NR3C1 STAT3
4962024
chr17 57903080 rs533435776 A ACT
EP300 FOXA1 NR3C1 STAT3
4962025
Genes possibly regulated by vista25360[chr17:57902814-57903248]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 57936851 57970304 - TUBD1 ENSG00000108423.10 57970304 0.67 0.99 16107 32944
chr17 57970447 58027925 + RPS6KB1 ENSG00000108443.9 57970447 0.59 0.98 16108 32801
Expression level of Genes
Back to top
miRNAs possibly regulated by vista25360[chr17:57902814-57903248]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 57918672 57918692 + hsa-miR-21-3p MIMAT0004494 57915291 0.11972715849937175 0.710898 0.678791 730
Expression level of miRNAs
Back to top