EnhancerDB
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  3. vista25362[chr17:57905350-57905555]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25362[chr17:57905350-57905555]
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Tissue distribution of vista25362
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Transcription factor that possibly regulate vista25362[chr17:57905350-57905555]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 57905252 57907881 POLR2A UCSC Txn Factor no Conserved 108277933
chr17 57905252 57907881 POLR2A UCSC Txn Factor no Conserved 108277934
chr17 57905252 57907881 POLR2A UCSC Txn Factor no Conserved 108277935
chr17 57905305 57905681 TBP UCSC Txn Factor no Conserved 108277947
chr17 57905384 57905536 EP300 UCSC Txn Factor no Conserved 108277961
chr17 57905358 57905371 ATF4 JASPAR yes 21266440
chr17 57905358 57905371 ATF4 JASPAR yes 55086359
chr17 57905382 57905397 FOXP1 JASPAR yes 21266441
chr17 57905382 57905397 FOXP1 JASPAR yes 55086360
chr17 57905383 57905398 FOXP1 JASPAR yes 21266442
chr17 57905383 57905398 FOXP1 JASPAR yes 55086361
chr17 57905384 57905390 TBP TRANSFAC yes 21266443
chr17 57905384 57905390 TBP TRANSFAC yes 55086362
chr17 57905384 57905399 FOXP1 JASPAR yes 21266444
chr17 57905384 57905399 FOXP1 JASPAR yes 55086363
chr17 57905385 57905400 FOXP1 JASPAR yes 21266445
chr17 57905385 57905400 FOXP1 JASPAR yes 55086364
chr17 57905386 57905401 FOXP1 JASPAR yes 21266446
chr17 57905386 57905401 FOXP1 JASPAR yes 55086365
chr17 57905386 57905407 IRF1 JASPAR yes 21266447
chr17 57905386 57905407 IRF1 JASPAR yes 55086366
chr17 57905387 57905402 FOXP1 JASPAR yes 21266448
chr17 57905387 57905402 FOXP1 JASPAR yes 55086367
chr17 57905403 57905415 PKNOX2 JASPAR yes 21266449
chr17 57905403 57905415 PKNOX2 JASPAR yes 55086368
chr17 57905412 57905424 IRF1 JASPAR yes 21266450
chr17 57905412 57905424 IRF1 JASPAR yes 55086369
chr17 57905413 57905417 NFE TRANSFAC yes 21266451
chr17 57905413 57905417 NFE TRANSFAC yes 55086370
chr17 57905417 57905421 YY1 TRANSFAC yes 21266452
chr17 57905417 57905421 YY1 TRANSFAC yes 55086371
chr17 57905424 57905428 TEAD2 TRANSFAC yes 21266453
chr17 57905424 57905428 TEAD2 TRANSFAC yes 55086372
chr17 57905424 57905429 TBP TRANSFAC yes 21266454
chr17 57905424 57905429 TBP TRANSFAC yes 55086373
chr17 57905424 57905430 TMF TRANSFAC yes 21266455
chr17 57905424 57905430 TMF TRANSFAC yes 55086374
chr17 57905426 57905439 DUXA JASPAR yes 21266456
chr17 57905426 57905439 DUXA JASPAR yes 55086375
chr17 57905427 57905438 DUX4 JASPAR yes 21266457
chr17 57905427 57905438 DUX4 JASPAR yes 55086376
chr17 57905436 57905441 MYC TRANSFAC yes 21266458
chr17 57905436 57905441 MYC TRANSFAC yes 55086377
chr17 57905437 57905452 HNF1A JASPAR yes 21266459
chr17 57905437 57905452 HNF1A JASPAR yes 55086378
chr17 57905438 57905451 HNF1B JASPAR yes 21266460
chr17 57905438 57905451 HNF1B JASPAR yes 55086379
chr17 57905447 57905450 MYB TRANSFAC yes 21266461
chr17 57905447 57905450 MYB TRANSFAC yes 55086380
chr17 57905453 57905465 IRF1 JASPAR yes 21266462
chr17 57905453 57905465 IRF1 JASPAR yes 55086381
chr17 57905453 57905467 IRF7 JASPAR yes 21266463
chr17 57905453 57905467 IRF7 JASPAR yes 55086382
chr17 57905455 57905461 TCF4 TRANSFAC yes 21266464
chr17 57905455 57905461 TCF4 TRANSFAC yes 55086383
chr17 57905455 57905471 RFX5 JASPAR yes 21266465
chr17 57905455 57905471 RFX5 JASPAR yes 55086384
chr17 57905456 57905475 RFX2 JASPAR yes 21266466
chr17 57905456 57905475 RFX2 JASPAR yes 55086385
chr17 57905460 57905470 NFIA JASPAR yes 21266467
chr17 57905460 57905470 NFIA JASPAR yes 55086386
chr17 57905461 57905470 NFIX JASPAR yes 21266468
chr17 57905461 57905470 NFIX JASPAR yes 55086387
chr17 57905462 57905468 NFIC JASPAR yes 21266469
chr17 57905462 57905468 NFIC JASPAR yes 55086388
chr17 57905462 57905477 NFYB JASPAR yes 21266470
chr17 57905462 57905477 NFYB JASPAR yes 55086389
chr17 57905464 57905480 NFYA JASPAR yes 21266471
chr17 57905464 57905480 NFYA JASPAR yes 55086390
chr17 57905465 57905483 NFYA JASPAR yes 21266472
chr17 57905465 57905483 NFYA JASPAR yes 55086391
chr17 57905469 57905473 H1TF2 TRANSFAC yes 21266473
chr17 57905469 57905473 NFE TRANSFAC yes 21266474
chr17 57905469 57905473 SRF TRANSFAC yes 21266475
chr17 57905469 57905473 H1TF2 TRANSFAC yes 55086392
chr17 57905469 57905473 NFE TRANSFAC yes 55086393
chr17 57905469 57905473 SRF TRANSFAC yes 55086394
chr17 57905516 57905528 TEAD1 JASPAR yes 21266476
chr17 57905516 57905528 TEAD1 JASPAR yes 55086395
chr17 57905518 57905536 MAFF JASPAR yes 21266477
chr17 57905518 57905536 MAFF JASPAR yes 55086396
chr17 57905519 57905534 MAFK JASPAR yes 21266478
chr17 57905519 57905534 MAFK JASPAR yes 55086397
chr17 57905523 57905534 NRL JASPAR yes 21266479
chr17 57905523 57905534 NRL JASPAR yes 55086398
SNP sites on vista25362[chr17:57905350-57905555]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 57905401 rs557449529 A G
EP300 FOXP1 IRF1 POLR2A TBP
4962042
Genes possibly regulated by vista25362[chr17:57905350-57905555]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 57936851 57970304 - TUBD1 ENSG00000108423.10 57970304 0.67 0.99 16107 35251
chr17 57970447 58027925 + RPS6KB1 ENSG00000108443.9 57970447 0.59 0.98 16108 35108
Expression level of Genes
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miRNAs possibly regulated by vista25362[chr17:57905350-57905555]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 57918672 57918692 + hsa-miR-21-3p MIMAT0004494 57915291 0.14491808977534437 0.710898 0.678791 730
Expression level of miRNAs
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