EnhancerDB
  1. Home
  2. Enhancers
  3. vista25368[chr17:57929068-57929265]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25368[chr17:57929068-57929265]
Back to top
Tissue distribution of vista25368
Back to top
Transcription factor that possibly regulate vista25368[chr17:57929068-57929265]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 57929075 57929093 ESR2 JASPAR yes 21266963
chr17 57929075 57929093 ESR2 JASPAR yes 55089092
chr17 57929076 57929091 RUNX2 JASPAR yes 21266964
chr17 57929076 57929091 RUNX2 JASPAR yes 55089093
chr17 57929099 57929106 SPIB JASPAR yes 21266965
chr17 57929099 57929106 SPIB JASPAR yes 55089094
chr17 57929105 57929111 MZF1 JASPAR yes 21266966
chr17 57929105 57929111 MZF1 JASPAR yes 55089095
chr17 57929112 57929117 GATA2 JASPAR yes 21266967
chr17 57929112 57929117 GATA2 JASPAR yes 55089096
chr17 57929125 57929128 MYB TRANSFAC yes 21266968
chr17 57929125 57929128 MYB TRANSFAC yes 55089097
chr17 57929135 57929141 SP1 TRANSFAC yes 21266969
chr17 57929135 57929141 SP1 TRANSFAC yes 55089098
chr17 57929162 57929179 BCL6B JASPAR yes 21266970
chr17 57929162 57929179 BCL6B JASPAR yes 55089099
chr17 57929164 57929181 RARA JASPAR yes 21266971
chr17 57929164 57929181 RARA JASPAR yes 55089100
chr17 57929181 57929199 SRF JASPAR yes 21266972
chr17 57929181 57929199 SRF JASPAR yes 55089101
chr17 57929182 57929186 NFE TRANSFAC yes 21266973
chr17 57929182 57929186 NFE TRANSFAC yes 55089102
chr17 57929183 57929199 SRF JASPAR yes 21266974
chr17 57929183 57929199 SRF JASPAR yes 55089103
chr17 57929183 57929201 SRF JASPAR yes 21266975
chr17 57929183 57929201 SRF JASPAR yes 55089104
chr17 57929189 57929193 TEAD2 TRANSFAC yes 21266976
chr17 57929189 57929193 TEAD2 TRANSFAC yes 55089105
chr17 57929201 57929212 CEBPA JASPAR yes 21266977
chr17 57929201 57929212 CEBPA JASPAR yes 55089106
chr17 57929204 57929210 NFIC JASPAR yes 21266978
chr17 57929204 57929210 NFIC JASPAR yes 55089107
chr17 57929213 57929224 FLI1 JASPAR yes 21266979
chr17 57929213 57929224 FLI1 JASPAR yes 55089108
chr17 57929214 57929219 H4TF1 TRANSFAC yes 21266980
chr17 57929214 57929219 H4TF1 TRANSFAC yes 55089109
chr17 57929214 57929224 ERF JASPAR yes 21266981
chr17 57929214 57929224 ERG JASPAR yes 21266982
chr17 57929214 57929224 ETS1 JASPAR yes 21266983
chr17 57929214 57929224 FLI1 JASPAR yes 21266984
chr17 57929214 57929224 ERF JASPAR yes 55089110
chr17 57929214 57929224 ERG JASPAR yes 55089111
chr17 57929214 57929224 ETS1 JASPAR yes 55089112
chr17 57929214 57929224 FLI1 JASPAR yes 55089113
chr17 57929214 57929225 ETV2 JASPAR yes 21266985
chr17 57929214 57929225 ETV2 JASPAR yes 55089114
chr17 57929215 57929223 FEV JASPAR yes 21266986
chr17 57929215 57929223 FEV JASPAR yes 55089115
chr17 57929259 57929269 SMAD3 JASPAR yes 21266987
chr17 57929259 57929269 SMAD3 JASPAR yes 55089116
SNP sites on vista25368[chr17:57929068-57929265]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 57929101 rs375372354 T G
SPIB
4962249
chr17 57929123 rs139594339 G A no 4962250
chr17 57929236 rs143502014 G A no 4962251
Genes possibly regulated by vista25368[chr17:57929068-57929265]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 57936851 57970304 - TUBD1 ENSG00000108423.10 57970304 0.67 0.99 16107 58961
chr17 57970447 58027925 + RPS6KB1 ENSG00000108443.9 57970447 0.59 0.98 16108 58818
chr17 58018269 58050462 + RP11-178C3.1 ENSG00000267318.1 58018269 0.93 0.94 16109 10996
Expression level of Genes
Back to top
miRNAs possibly regulated by vista25368[chr17:57929068-57929265]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results