EnhancerDB
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  3. vista25378[chr17:58172215-58172508]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25378[chr17:58172215-58172508]
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Tissue distribution of vista25378
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Transcription factor that possibly regulate vista25378[chr17:58172215-58172508]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 58172208 58172219 DMRT3 JASPAR yes 21267453
chr17 58172208 58172219 DMRT3 JASPAR yes 55094189
chr17 58172215 58172219 YY1 TRANSFAC yes 21267454
chr17 58172215 58172219 YY1 TRANSFAC yes 55094190
chr17 58172220 58172227 SPI1 JASPAR yes 21267455
chr17 58172220 58172227 SPI1 JASPAR yes 55094191
chr17 58172241 58172245 YY1 TRANSFAC yes 21267456
chr17 58172241 58172245 YY1 TRANSFAC yes 55094192
chr17 58172260 58172265 ETS2 TRANSFAC yes 21267457
chr17 58172260 58172265 ETS2 TRANSFAC yes 55094193
chr17 58172260 58172278 NFYA JASPAR yes 21267458
chr17 58172260 58172278 NFYA JASPAR yes 55094194
chr17 58172262 58172270 EHF JASPAR yes 21267459
chr17 58172262 58172270 EHF JASPAR yes 55094195
chr17 58172263 58172279 NFYA JASPAR yes 21267460
chr17 58172263 58172279 NFYA JASPAR yes 55094196
chr17 58172266 58172281 NFYB JASPAR yes 21267461
chr17 58172266 58172281 NFYB JASPAR yes 55094197
chr17 58172279 58172292 ELF1 JASPAR yes 21267462
chr17 58172279 58172292 ELF1 JASPAR yes 55094198
chr17 58172280 58172290 ELK1 JASPAR yes 21267463
chr17 58172280 58172290 ELK1 JASPAR yes 55094199
chr17 58172282 58172292 GABPA JASPAR yes 21267464
chr17 58172282 58172292 GABPA JASPAR yes 55094200
chr17 58172284 58172290 ETS1 JASPAR yes 21267465
chr17 58172284 58172290 SPI1 JASPAR yes 21267466
chr17 58172284 58172290 ETS1 JASPAR yes 55094201
chr17 58172284 58172290 SPI1 JASPAR yes 55094202
chr17 58172294 58172309 JUND JASPAR yes 21267467
chr17 58172294 58172309 JUND JASPAR yes 55094203
chr17 58172296 58172310 ATF7 JASPAR yes 21267468
chr17 58172296 58172310 BATF3 JASPAR yes 21267469
chr17 58172296 58172310 ATF7 JASPAR yes 55094204
chr17 58172296 58172310 BATF3 JASPAR yes 55094205
chr17 58172297 58172309 HLF JASPAR yes 21267470
chr17 58172297 58172309 JDP2 JASPAR yes 21267471
chr17 58172297 58172309 HLF JASPAR yes 55094206
chr17 58172297 58172309 JDP2 JASPAR yes 55094207
chr17 58172297 58172312 JUND JASPAR yes 21267472
chr17 58172297 58172312 JUND JASPAR yes 55094208
chr17 58172298 58172307 JUN TRANSFAC yes 21267473
chr17 58172298 58172307 JUN TRANSFAC yes 55094209
chr17 58172298 58172311 JUN JASPAR yes 21267474
chr17 58172298 58172311 JUN JASPAR yes 55094210
chr17 58172299 58172306 JUN TRANSFAC yes 21267475
chr17 58172299 58172306 JUN TRANSFAC yes 55094211
chr17 58172299 58172316 RXRA JASPAR yes 21267476
chr17 58172299 58172316 RXRA JASPAR yes 55094212
chr17 58172313 58172328 FOXA1 JASPAR yes 21267477
chr17 58172313 58172328 FOXA1 JASPAR yes 55094213
chr17 58172314 58172320 LEF1 TRANSFAC yes 21267478
chr17 58172314 58172320 SOX10 JASPAR yes 21267479
chr17 58172314 58172320 LEF1 TRANSFAC yes 55094214
chr17 58172314 58172320 SOX10 JASPAR yes 55094215
chr17 58172315 58172327 FOXC2 JASPAR yes 21267480
chr17 58172315 58172327 FOXC2 JASPAR yes 55094216
chr17 58172316 58172327 FOXC1 JASPAR yes 21267481
chr17 58172316 58172327 FOXC1 JASPAR yes 55094217
chr17 58172317 58172328 FOXA1 JASPAR yes 21267482
chr17 58172317 58172328 FOXA1 JASPAR yes 55094218
chr17 58172319 58172325 NFIC JASPAR yes 21267483
chr17 58172319 58172325 NFIC JASPAR yes 55094219
chr17 58172338 58172342 YY1 TRANSFAC yes 21267484
chr17 58172338 58172342 YY1 TRANSFAC yes 55094220
chr17 58172363 58172377 IRF8 JASPAR yes 21267485
chr17 58172363 58172377 IRF8 JASPAR yes 55094221
chr17 58172371 58172385 SPI1 JASPAR yes 21267486
chr17 58172371 58172385 SPI1 JASPAR yes 55094222
chr17 58172377 58172382 ETS2 TRANSFAC yes 21267487
chr17 58172377 58172382 ETS2 TRANSFAC yes 55094223
chr17 58172388 58172409 ZNF263 JASPAR yes 21267488
chr17 58172388 58172409 ZNF263 JASPAR yes 55094224
chr17 58172391 58172412 ZNF263 JASPAR yes 21267489
chr17 58172391 58172412 ZNF263 JASPAR yes 55094225
chr17 58172394 58172415 ZNF263 JASPAR yes 21267490
chr17 58172394 58172415 ZNF263 JASPAR yes 55094226
chr17 58172447 58172454 NKX3-1 JASPAR yes 21267491
chr17 58172447 58172454 NKX3-1 JASPAR yes 55094227
chr17 58172447 58172458 FOXB1 JASPAR yes 21267492
chr17 58172447 58172458 FOXB1 JASPAR yes 55094228
chr17 58172455 58172460 H4TF1 TRANSFAC yes 21267493
chr17 58172455 58172460 H4TF1 TRANSFAC yes 55094229
chr17 58172468 58172472 H1TF2 TRANSFAC yes 21267494
chr17 58172468 58172472 NFE TRANSFAC yes 21267495
chr17 58172468 58172472 SRF TRANSFAC yes 21267496
chr17 58172468 58172472 H1TF2 TRANSFAC yes 55094230
chr17 58172468 58172472 NFE TRANSFAC yes 55094231
chr17 58172468 58172472 SRF TRANSFAC yes 55094232
chr17 58172475 58172479 NFE TRANSFAC yes 21267497
chr17 58172475 58172479 NFE TRANSFAC yes 55094233
SNP sites on vista25378[chr17:58172215-58172508]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 58172319 rs148090701 G GT
FOXA1 FOXC1 FOXC2 LEF1 NFIC SOX10
4962939
chr17 58172422 rs144528842 T A no 4962940
chr17 58172447 rs7223281 G A
FOXB1 NKX3-1
4962941
Genes possibly regulated by vista25378[chr17:58172215-58172508]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 58120555 58156292 - HEATR6 ENSG00000068097.10 58156292 0.65 0.99 16111 84077
chr17 58227297 58248260 + CA4 ENSG00000167434.5 58227297 0.87 1.0 16112 45211
Expression level of Genes
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miRNAs possibly regulated by vista25378[chr17:58172215-58172508]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results