EnhancerDB
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  3. vista25379[chr17:58212242-58212405]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25379[chr17:58212242-58212405]
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Tissue distribution of vista25379
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Transcription factor that possibly regulate vista25379[chr17:58212242-58212405]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 58212231 58213407 POLR2A UCSC Txn Factor no Conserved 108278803
chr17 58212248 58212268 RREB1 JASPAR yes 21267498
chr17 58212248 58212268 RREB1 JASPAR yes 55096956
chr17 58212255 58212265 ZNF740 JASPAR yes 21267499
chr17 58212255 58212265 ZNF740 JASPAR yes 55096957
chr17 58212257 58212278 REST JASPAR yes 21267500
chr17 58212257 58212278 REST JASPAR yes 55096958
chr17 58212258 58212278 RREB1 JASPAR yes 21267501
chr17 58212258 58212278 RREB1 JASPAR yes 55096959
chr17 58212270 58212289 REST JASPAR yes 21267502
chr17 58212270 58212289 REST JASPAR yes 55096960
chr17 58212274 58212279 MYC TRANSFAC yes 21267503
chr17 58212274 58212279 MYC TRANSFAC yes 55096961
chr17 58212300 58212305 GATA2 JASPAR yes 21267504
chr17 58212300 58212305 GATA2 JASPAR yes 55096962
chr17 58212306 58212326 RREB1 JASPAR yes 21267505
chr17 58212306 58212326 RREB1 JASPAR yes 55096963
chr17 58212308 58212318 GCM2 JASPAR yes 21267506
chr17 58212308 58212318 GCM2 JASPAR yes 55096964
chr17 58212325 58212339 CREB3 JASPAR yes 21267507
chr17 58212325 58212339 CREB3 JASPAR yes 55096965
chr17 58212328 58212333 ATF1 TRANSFAC yes 21267508
chr17 58212328 58212333 ATF1 TRANSFAC yes 55096966
chr17 58212335 58212342 PEA3 TRANSFAC yes 21267509
chr17 58212335 58212342 PEA3 TRANSFAC yes 55096967
chr17 58212354 58212366 TAL1 JASPAR yes 21267510
chr17 58212354 58212366 TAL1 JASPAR yes 55096968
chr17 58212356 58212366 NEUROG2 JASPAR yes 21267511
chr17 58212356 58212366 NEUROG2 JASPAR yes 55096969
chr17 58212364 58212384 RREB1 JASPAR yes 21267512
chr17 58212364 58212384 RREB1 JASPAR yes 55096970
chr17 58212369 58212389 RREB1 JASPAR yes 21267513
chr17 58212369 58212389 RREB1 JASPAR yes 55096971
chr17 58212373 58212393 RREB1 JASPAR yes 21267514
chr17 58212373 58212393 RREB1 JASPAR yes 55096972
chr17 58212374 58212384 SP1 JASPAR yes 21267515
chr17 58212374 58212384 SP1 JASPAR yes 55096973
chr17 58212374 58212394 RREB1 JASPAR yes 21267516
chr17 58212374 58212394 RREB1 JASPAR yes 55096974
chr17 58212380 58212386 SP1 TRANSFAC yes 21267517
chr17 58212380 58212386 SP1 TRANSFAC yes 55096975
chr17 58212380 58212390 SP1 JASPAR yes 21267518
chr17 58212380 58212390 SP1 JASPAR yes 55096976
chr17 58212381 58212391 ZNF740 JASPAR yes 21267519
chr17 58212381 58212391 ZNF740 JASPAR yes 55096977
chr17 58212384 58212390 MZF1 JASPAR yes 21267520
chr17 58212384 58212390 MZF1 JASPAR yes 55096978
SNP sites on vista25379[chr17:58212242-58212405]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 58212343 rs185937718 T C
POLR2A
4963206
chr17 58212358 rs377441213 A G
NEUROG2 POLR2A TAL1
4963207
Genes possibly regulated by vista25379[chr17:58212242-58212405]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 58120555 58156292 - HEATR6 ENSG00000068097.10 58156292 0.65 0.99 16111 44050
chr17 58227297 58248260 + CA4 ENSG00000167434.5 58227297 0.87 1.0 16112 85108
Expression level of Genes
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miRNAs possibly regulated by vista25379[chr17:58212242-58212405]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results