EnhancerDB
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  3. vista25388[chr17:58470515-58470600]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25388[chr17:58470515-58470600]
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Tissue distribution of vista25388
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Transcription factor that possibly regulate vista25388[chr17:58470515-58470600]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 58468156 58470809 POLR2A UCSC Txn Factor no Conserved 108278918
chr17 58468156 58470809 POLR2A UCSC Txn Factor no Conserved 108278919
chr17 58470463 58470847 USF1 UCSC Txn Factor no Conserved 108278956
chr17 58470489 58470765 USF2 UCSC Txn Factor no Conserved 108278961
chr17 58470521 58470535 IRF8 JASPAR yes 21267915
chr17 58470521 58470536 IRF9 JASPAR yes 21267916
chr17 58470522 58470526 NFE TRANSFAC yes 21267917
chr17 58470525 58470540 PRDM1 JASPAR yes 21267918
chr17 58470541 58470548 NKX3-1 JASPAR yes 21267919
chr17 58470545 58470549 YY1 TRANSFAC yes 21267920
chr17 58470545 58470556 ETV2 JASPAR yes 21267921
chr17 58470546 58470554 FEV JASPAR yes 21267922
chr17 58470548 58470555 SPIB JASPAR yes 21267923
chr17 58470559 58470573 NR2F1 JASPAR yes 21267924
chr17 58470566 58470584 IRF2 JASPAR yes 21267925
chr17 58470567 58470588 IRF1 JASPAR yes 21267926
chr17 58470569 58470584 PRDM1 JASPAR yes 21267927
chr17 58470569 58470584 STAT2 JASPAR yes 21267928
chr17 58470570 58470584 SPIC JASPAR yes 21267929
chr17 58470570 58470584 STAT1 JASPAR yes 21267930
chr17 58470571 58470585 IRF7 JASPAR yes 21267931
chr17 58470571 58470585 IRF8 JASPAR yes 21267932
chr17 58470571 58470586 IRF9 JASPAR yes 21267933
chr17 58470593 58470597 YY1 TRANSFAC yes 21267934
SNP sites on vista25388[chr17:58470515-58470600]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 58470518 rs373876348 T C
POLR2A USF1 USF2
4964180
Genes possibly regulated by vista25388[chr17:58470515-58470600]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 58256455 58499831 - USP32 ENSG00000170832.8 58499831 0.77 0.99 16113 70769
chr17 58469790 58508782 + C17orf64 ENSG00000141371.8 58469790 0.91 1.0 16114 99275
Expression level of Genes
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miRNAs possibly regulated by vista25388[chr17:58470515-58470600]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results