EnhancerDB
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  3. vista25389[chr17:58471589-58471771]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25389[chr17:58471589-58471771]
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Tissue distribution of vista25389
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Transcription factor that possibly regulate vista25389[chr17:58471589-58471771]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 58471611 58471621 EMX1 JASPAR yes 21267935
chr17 58471611 58471621 GSX1 JASPAR yes 21267936
chr17 58471611 58471621 GSX2 JASPAR yes 21267937
chr17 58471611 58471621 HOXB2 JASPAR yes 21267938
chr17 58471611 58471621 MEOX1 JASPAR yes 21267939
chr17 58471611 58471621 MEOX2 JASPAR yes 21267940
chr17 58471611 58471621 POU6F1 JASPAR yes 21267941
chr17 58471612 58471620 LMX1A JASPAR yes 21267942
chr17 58471612 58471620 LMX1B JASPAR yes 21267943
chr17 58471612 58471620 NKX6-1 JASPAR yes 21267944
chr17 58471612 58471620 NKX6-2 JASPAR yes 21267945
chr17 58471612 58471620 PDX1 JASPAR yes 21267946
chr17 58471612 58471620 VAX1 JASPAR yes 21267947
chr17 58471612 58471620 VAX2 JASPAR yes 21267948
chr17 58471612 58471620 VSX1 JASPAR yes 21267949
chr17 58471616 58471624 BSX JASPAR yes 21267950
chr17 58471621 58471626 ETS2 TRANSFAC yes 21267951
chr17 58471635 58471641 TCF4 TRANSFAC yes 21267952
chr17 58471642 58471655 ZBTB18 JASPAR yes 21267953
chr17 58471643 58471655 NHLH1 JASPAR yes 21267954
chr17 58471644 58471654 NHLH1 JASPAR yes 21267955
chr17 58471678 58471689 CEBPB JASPAR yes 21267956
chr17 58471678 58471691 ATF4 JASPAR yes 21267957
chr17 58471679 58471690 CEBPA JASPAR yes 21267958
chr17 58471704 58471708 NFE TRANSFAC yes 21267959
chr17 58471725 58471737 TAL1 JASPAR yes 21267960
chr17 58471729 58471735 YY1 JASPAR yes 21267961
chr17 58471734 58471752 SRF JASPAR yes 21267962
chr17 58471748 58471753 GATA2 JASPAR yes 21267963
chr17 58471758 58471770 FOXI1 JASPAR yes 21267964
chr17 58471761 58471765 YY1 TRANSFAC yes 21267965
SNP sites on vista25389[chr17:58471589-58471771]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 58471600 rs148210645 G A,C no 4964186
chr17 58471612 rs117677241 C T
EMX1 GSX1 GSX2 HOXB2 LMX1A LMX1B MEOX1 MEOX2 NKX6-1 NKX6-2 PDX1 POU6F1 VAX1 VAX2 VSX1
4964187
Genes possibly regulated by vista25389[chr17:58471589-58471771]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 58256455 58499831 - USP32 ENSG00000170832.8 58499831 0.77 0.99 16113 71940
chr17 58469790 58508782 + C17orf64 ENSG00000141371.8 58469790 0.91 1.0 16114 98201
Expression level of Genes
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miRNAs possibly regulated by vista25389[chr17:58471589-58471771]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results