EnhancerDB
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  3. vista25405[chr17:59434096-59434461]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25405[chr17:59434096-59434461]
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Tissue distribution of vista25405
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Transcription factor that possibly regulate vista25405[chr17:59434096-59434461]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 59434051 59434371 FOSL2 UCSC Txn Factor no Conserved 108279414
chr17 59434063 59434339 FOXA1 UCSC Txn Factor no Conserved 108279418
chr17 59434089 59434318 FOXA2 UCSC Txn Factor no Conserved 108279422
chr17 59434118 59434321 JUND UCSC Txn Factor no Conserved 108279428
chr17 59434155 59434291 ARID3A UCSC Txn Factor no Conserved 108279431
chr17 59434135 59434147 YY1 JASPAR yes 21268554
chr17 59434140 59434144 YY1 TRANSFAC yes 21268555
chr17 59434142 59434155 EOMES JASPAR yes 21268556
chr17 59434144 59434154 TBR1 JASPAR yes 21268557
chr17 59434163 59434173 TEAD1 JASPAR yes 21268558
chr17 59434163 59434173 TEAD4 JASPAR yes 21268559
chr17 59434163 59434175 TEAD1 JASPAR yes 21268560
chr17 59434164 59434172 TEAD3 JASPAR yes 21268561
chr17 59434175 59434189 POU4F1 JASPAR yes 21268562
chr17 59434175 59434191 POU4F2 JASPAR yes 21268563
chr17 59434175 59434191 POU4F3 JASPAR yes 21268564
chr17 59434177 59434192 MEF2C JASPAR yes 21268565
chr17 59434178 59434193 MEF2A JASPAR yes 21268566
chr17 59434179 59434191 MEF2A JASPAR yes 21268567
chr17 59434179 59434191 MEF2B JASPAR yes 21268568
chr17 59434179 59434191 MEF2D JASPAR yes 21268569
chr17 59434180 59434190 MEF2A JASPAR yes 21268570
chr17 59434181 59434195 FOXF2 JASPAR yes 21268571
chr17 59434181 59434195 ONECUT3 JASPAR yes 21268572
chr17 59434182 59434197 FOXA1 JASPAR yes 21268573
chr17 59434183 59434194 FOXB1 JASPAR yes 21268574
chr17 59434183 59434194 FOXC1 JASPAR yes 21268575
chr17 59434183 59434195 FOXC2 JASPAR yes 21268576
chr17 59434184 59434196 FOXI1 JASPAR yes 21268577
chr17 59434194 59434209 FOXA1 JASPAR yes 21268578
chr17 59434195 59434205 MAX JASPAR yes 21268579
chr17 59434197 59434212 FOXA1 JASPAR yes 21268580
chr17 59434206 59434220 JUN JASPAR yes 21268581
chr17 59434208 59434219 BATF JASPAR yes 21268582
chr17 59434209 59434220 JUNB JASPAR yes 21268583
chr17 59434210 59434221 FOS JASPAR yes 21268584
chr17 59434210 59434221 FOSL1 JASPAR yes 21268585
chr17 59434210 59434221 NFE2 JASPAR yes 21268586
chr17 59434211 59434220 JDP2 JASPAR yes 21268587
chr17 59434211 59434222 FOSL2 JASPAR yes 21268588
chr17 59434211 59434222 FOXA1 JASPAR yes 21268589
chr17 59434211 59434226 FOXA1 JASPAR yes 21268590
chr17 59434212 59434223 BATF JASPAR yes 21268591
chr17 59434212 59434223 FOXB1 JASPAR yes 21268592
chr17 59434212 59434223 FOXC1 JASPAR yes 21268593
chr17 59434212 59434224 FOXC2 JASPAR yes 21268594
chr17 59434221 59434235 TLX1 JASPAR yes 21268595
chr17 59434224 59434243 PAX5 JASPAR yes 21268596
chr17 59434227 59434244 PAX1 JASPAR yes 21268597
chr17 59434227 59434244 PAX9 JASPAR yes 21268598
chr17 59434234 59434249 RFX5 JASPAR yes 21268599
chr17 59434252 59434265 SMAD2 JASPAR yes 21268600
chr17 59434282 59434291 ZEB1 JASPAR yes 21268601
chr17 59434285 59434290 USF2 TRANSFAC yes 21268602
chr17 59434288 59434294 NFE2 TRANSFAC yes 21268603
chr17 59434289 59434300 TFAP2A JASPAR yes 21268604
chr17 59434289 59434300 TFAP2B JASPAR yes 21268605
chr17 59434289 59434300 TFAP2C JASPAR yes 21268606
chr17 59434290 59434299 TFAP2A JASPAR yes 21268607
chr17 59434296 59434307 FOSL2 JASPAR yes 21268608
chr17 59434296 59434307 JUNB JASPAR yes 21268609
chr17 59434296 59434307 NFE2L2 JASPAR yes 21268610
chr17 59434297 59434308 FOS JASPAR yes 21268611
chr17 59434297 59434308 FOSL1 JASPAR yes 21268612
chr17 59434297 59434308 JUND JASPAR yes 21268613
chr17 59434299 59434306 JUN TRANSFAC yes 21268614
chr17 59434302 59434323 REST JASPAR yes 21268615
chr17 59434303 59434322 REST JASPAR yes 21268616
chr17 59434322 59434329 MEIS1 JASPAR yes 21268617
chr17 59434322 59434330 MEIS2 JASPAR yes 21268618
chr17 59434342 59434353 ESRRA JASPAR yes 21268619
chr17 59434342 59434353 ESRRB JASPAR yes 21268620
chr17 59434342 59434355 NR2F1 JASPAR yes 21268621
chr17 59434343 59434361 ESR2 JASPAR yes 21268622
chr17 59434344 59434352 NR4A2 JASPAR yes 21268623
chr17 59434346 59434350 ESR1 TRANSFAC yes 21268624
chr17 59434346 59434357 USF1 JASPAR yes 21268625
chr17 59434374 59434383 ZEB1 JASPAR yes 21268626
chr17 59434375 59434385 FIGLA JASPAR yes 21268627
chr17 59434375 59434385 TCF4 JASPAR yes 21268628
chr17 59434377 59434382 USF2 TRANSFAC yes 21268629
chr17 59434382 59434386 H4TF2 TRANSFAC yes 21268630
chr17 59434401 59434417 ZNF143 JASPAR yes 21268631
chr17 59434402 59434413 EBF1 JASPAR yes 21268632
chr17 59434412 59434416 YY1 TRANSFAC yes 21268633
chr17 59434424 59434442 NR3C1 JASPAR yes 21268634
chr17 59434425 59434446 IRF1 JASPAR yes 21268635
chr17 59434427 59434442 PRDM1 JASPAR yes 21268636
chr17 59434427 59434442 STAT2 JASPAR yes 21268637
chr17 59434429 59434443 IRF7 JASPAR yes 21268638
chr17 59434429 59434444 IRF9 JASPAR yes 21268639
chr17 59434429 59434450 IRF1 JASPAR yes 21268640
chr17 59434431 59434452 IRF1 JASPAR yes 21268641
chr17 59434435 59434456 IRF1 JASPAR yes 21268642
chr17 59434437 59434452 PRDM1 JASPAR yes 21268643
chr17 59434437 59434452 STAT2 JASPAR yes 21268644
chr17 59434438 59434452 SPIC JASPAR yes 21268645
chr17 59434438 59434452 STAT1 JASPAR yes 21268646
chr17 59434439 59434460 IRF1 JASPAR yes 21268647
chr17 59434440 59434455 FOXP1 JASPAR yes 21268648
chr17 59434440 59434461 IRF1 JASPAR yes 21268649
chr17 59434442 59434457 FOXP1 JASPAR yes 21268650
chr17 59434444 59434459 FOXP1 JASPAR yes 21268651
chr17 59434445 59434460 FOXP1 JASPAR yes 21268652
chr17 59434446 59434461 FOXP1 JASPAR yes 21268653
SNP sites on vista25405[chr17:59434096-59434461]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 59434336 rs140883159 C A
FOSL2 FOXA1
4967846
chr17 59434449 rs576782227 T C
FOXP1 IRF1 PRDM1 SPIC STAT1 STAT2
4967847
Genes possibly regulated by vista25405[chr17:59434096-59434461]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 59477257 59486827 + TBX2 ENSG00000121068.9 59477257 0.92 0.93 16119 57204
chr17 59489112 59490641 + C17orf82 ENSG00000187013.2 59489112 0.89 0.99 16120 45349
chr17 59529765 59562471 + TBX4 ENSG00000121075.5 59529765 1.0 1.0 16121 4696
Expression level of Genes
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miRNAs possibly regulated by vista25405[chr17:59434096-59434461]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results