EnhancerDB
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  3. vista25425[chr17:60247601-60248070]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25425[chr17:60247601-60248070]
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Tissue distribution of vista25425
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Transcription factor that possibly regulate vista25425[chr17:60247601-60248070]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 60247638 60248178 EP300 UCSC Txn Factor no Conserved 108280257
chr17 60247711 60248067 RCOR1 UCSC Txn Factor no Conserved 108280268
chr17 60247755 60248266 POLR2A UCSC Txn Factor no Conserved 108280277
chr17 60247820 60247984 MAFF UCSC Txn Factor no Conserved 108280298
chr17 60247824 60247985 MAFK UCSC Txn Factor no Conserved 108280300
chr17 60247595 60247606 TBX20 JASPAR yes 21269485
chr17 60247595 60247606 TBX20 JASPAR yes 55189101
chr17 60247612 60247627 LEF1 JASPAR yes 21269486
chr17 60247612 60247627 LEF1 JASPAR yes 55189102
chr17 60247616 60247622 LEF1 TRANSFAC yes 21269487
chr17 60247616 60247622 SOX10 JASPAR yes 21269488
chr17 60247616 60247622 LEF1 TRANSFAC yes 55189103
chr17 60247616 60247622 SOX10 JASPAR yes 55189104
chr17 60247619 60247634 FOXP1 JASPAR yes 21269489
chr17 60247619 60247634 FOXP1 JASPAR yes 55189105
chr17 60247629 60247639 CUX1 JASPAR yes 21269490
chr17 60247629 60247639 CUX2 JASPAR yes 21269491
chr17 60247629 60247639 CUX1 JASPAR yes 55189106
chr17 60247629 60247639 CUX2 JASPAR yes 55189107
chr17 60247669 60247673 YY1 TRANSFAC yes 21269492
chr17 60247669 60247673 YY1 TRANSFAC yes 55189108
chr17 60247678 60247688 SP1 JASPAR yes 21269493
chr17 60247678 60247688 SP1 JASPAR yes 55189109
chr17 60247679 60247689 SP1 JASPAR yes 21269494
chr17 60247679 60247689 SP1 JASPAR yes 55189110
chr17 60247681 60247686 SP1 TRANSFAC yes 21269495
chr17 60247681 60247686 SP1 TRANSFAC yes 55189111
chr17 60247686 60247696 HMBOX1 JASPAR yes 21269496
chr17 60247686 60247696 HMBOX1 JASPAR yes 55189112
chr17 60247688 60247691 MYB TRANSFAC yes 21269497
chr17 60247688 60247691 MYB TRANSFAC yes 55189113
chr17 60247692 60247696 YY1 TRANSFAC yes 21269498
chr17 60247692 60247696 YY1 TRANSFAC yes 55189114
chr17 60247696 60247701 ETS2 TRANSFAC yes 21269499
chr17 60247696 60247701 ETS2 TRANSFAC yes 55189115
chr17 60247723 60247732 VENTX JASPAR yes 21269500
chr17 60247723 60247732 VENTX JASPAR yes 55189116
chr17 60247723 60247733 ESX1 JASPAR yes 21269501
chr17 60247723 60247733 GBX1 JASPAR yes 21269502
chr17 60247723 60247733 GBX2 JASPAR yes 21269503
chr17 60247723 60247733 GSX1 JASPAR yes 21269504
chr17 60247723 60247733 GSX2 JASPAR yes 21269505
chr17 60247723 60247733 HESX1 JASPAR yes 21269506
chr17 60247723 60247733 LBX2 JASPAR yes 21269507
chr17 60247723 60247733 LHX2 JASPAR yes 21269508
chr17 60247723 60247733 MNX1 JASPAR yes 21269509
chr17 60247723 60247733 RAX JASPAR yes 21269510
chr17 60247723 60247733 ESX1 JASPAR yes 55189117
chr17 60247723 60247733 GBX1 JASPAR yes 55189118
chr17 60247723 60247733 GBX2 JASPAR yes 55189119
chr17 60247723 60247733 GSX1 JASPAR yes 55189120
chr17 60247723 60247733 GSX2 JASPAR yes 55189121
chr17 60247723 60247733 HESX1 JASPAR yes 55189122
chr17 60247723 60247733 LBX2 JASPAR yes 55189123
chr17 60247723 60247733 LHX2 JASPAR yes 55189124
chr17 60247723 60247733 MNX1 JASPAR yes 55189125
chr17 60247723 60247733 RAX JASPAR yes 55189126
chr17 60247724 60247728 H1TF2 TRANSFAC yes 21269511
chr17 60247724 60247728 NFE TRANSFAC yes 21269512
chr17 60247724 60247728 SRF TRANSFAC yes 21269513
chr17 60247724 60247728 H1TF2 TRANSFAC yes 55189127
chr17 60247724 60247728 NFE TRANSFAC yes 55189128
chr17 60247724 60247728 SRF TRANSFAC yes 55189129
chr17 60247724 60247732 BARX1 JASPAR yes 21269514
chr17 60247724 60247732 BSX JASPAR yes 21269515
chr17 60247724 60247732 DLX6 JASPAR yes 21269516
chr17 60247724 60247732 ISX JASPAR yes 21269517
chr17 60247724 60247732 LBX1 JASPAR yes 21269518
chr17 60247724 60247732 LHX9 JASPAR yes 21269519
chr17 60247724 60247732 MSX1 JASPAR yes 21269520
chr17 60247724 60247732 MSX2 JASPAR yes 21269521
chr17 60247724 60247732 NKX6-2 JASPAR yes 21269522
chr17 60247724 60247732 PRRX1 JASPAR yes 21269523
chr17 60247724 60247732 RAX2 JASPAR yes 21269524
chr17 60247724 60247732 SHOX JASPAR yes 21269525
chr17 60247724 60247732 UNCX JASPAR yes 21269526
chr17 60247724 60247732 BARX1 JASPAR yes 55189130
chr17 60247724 60247732 BSX JASPAR yes 55189131
chr17 60247724 60247732 DLX6 JASPAR yes 55189132
chr17 60247724 60247732 ISX JASPAR yes 55189133
chr17 60247724 60247732 LBX1 JASPAR yes 55189134
chr17 60247724 60247732 LHX9 JASPAR yes 55189135
chr17 60247724 60247732 MSX1 JASPAR yes 55189136
chr17 60247724 60247732 MSX2 JASPAR yes 55189137
chr17 60247724 60247732 NKX6-2 JASPAR yes 55189138
chr17 60247724 60247732 PRRX1 JASPAR yes 55189139
chr17 60247724 60247732 RAX2 JASPAR yes 55189140
chr17 60247724 60247732 SHOX JASPAR yes 55189141
chr17 60247724 60247732 UNCX JASPAR yes 55189142
chr17 60247726 60247740 ONECUT2 JASPAR yes 21269527
chr17 60247726 60247740 ONECUT3 JASPAR yes 21269528
chr17 60247726 60247740 ONECUT2 JASPAR yes 55189143
chr17 60247726 60247740 ONECUT3 JASPAR yes 55189144
chr17 60247737 60247752 MEF2C JASPAR yes 21269529
chr17 60247737 60247752 MEF2C JASPAR yes 55189145
chr17 60247738 60247753 MEF2A JASPAR yes 21269530
chr17 60247738 60247753 MEF2A JASPAR yes 55189146
chr17 60247747 60247750 MYB TRANSFAC yes 21269531
chr17 60247747 60247750 MYB TRANSFAC yes 55189147
chr17 60247779 60247783 YY1 TRANSFAC yes 21269532
chr17 60247779 60247783 YY1 TRANSFAC yes 55189148
chr17 60247782 60247785 MYB TRANSFAC yes 21269533
chr17 60247782 60247785 MYB TRANSFAC yes 55189149
chr17 60247790 60247795 MYC TRANSFAC yes 21269534
chr17 60247790 60247795 MYC TRANSFAC yes 55189150
chr17 60247801 60247812 NFE2L2 JASPAR yes 21269535
chr17 60247801 60247812 NFE2L2 JASPAR yes 55189151
chr17 60247804 60247810 SOX10 JASPAR yes 21269536
chr17 60247804 60247810 SOX10 JASPAR yes 55189152
chr17 60247808 60247824 SOX4 JASPAR yes 21269537
chr17 60247808 60247824 SOX4 JASPAR yes 55189153
chr17 60247819 60247823 YY1 TRANSFAC yes 21269538
chr17 60247819 60247823 YY1 TRANSFAC yes 55189154
chr17 60247824 60247835 TBX20 JASPAR yes 21269539
chr17 60247824 60247835 TBX20 JASPAR yes 55189155
chr17 60247830 60247846 RFX5 JASPAR yes 21269540
chr17 60247830 60247846 RFX5 JASPAR yes 55189156
chr17 60247831 60247845 EBF1 JASPAR yes 21269541
chr17 60247831 60247845 EBF1 JASPAR yes 55189157
chr17 60247871 60247888 RXRA JASPAR yes 21269542
chr17 60247871 60247888 RXRA JASPAR yes 55189158
chr17 60247875 60247885 MZF1 JASPAR yes 21269543
chr17 60247875 60247885 MZF1 JASPAR yes 55189159
chr17 60247875 60247890 RFX5 JASPAR yes 21269544
chr17 60247875 60247890 RFX5 JASPAR yes 55189160
chr17 60247876 60247882 MZF1 JASPAR yes 21269545
chr17 60247876 60247882 MZF1 JASPAR yes 55189161
chr17 60247885 60247899 XBP1 JASPAR yes 21269546
chr17 60247885 60247899 XBP1 JASPAR yes 55189162
chr17 60247886 60247900 CREB3 JASPAR yes 21269547
chr17 60247886 60247900 CREB3L1 JASPAR yes 21269548
chr17 60247886 60247900 CREB3 JASPAR yes 55189163
chr17 60247886 60247900 CREB3L1 JASPAR yes 55189164
chr17 60247897 60247917 ESR1 JASPAR yes 21269549
chr17 60247897 60247917 ESR1 JASPAR yes 55189165
chr17 60247898 60247909 NFE2L2 JASPAR yes 21269550
chr17 60247898 60247909 NFE2L2 JASPAR yes 55189166
chr17 60247900 60247918 ESR2 JASPAR yes 21269551
chr17 60247900 60247918 ESR2 JASPAR yes 55189167
chr17 60247901 60247918 ESR1 JASPAR yes 21269552
chr17 60247901 60247918 ESR1 JASPAR yes 55189168
chr17 60247901 60247919 ESR2 JASPAR yes 21269553
chr17 60247901 60247919 ESR2 JASPAR yes 55189169
chr17 60247902 60247917 ESR2 JASPAR yes 21269554
chr17 60247902 60247917 ESR2 JASPAR yes 55189170
chr17 60247902 60247922 ESR1 JASPAR yes 21269555
chr17 60247902 60247922 ESR1 JASPAR yes 55189171
chr17 60247918 60247923 GATA2 JASPAR yes 21269556
chr17 60247918 60247923 GATA2 JASPAR yes 55189172
chr17 60247929 60247939 SP1 JASPAR yes 21269557
chr17 60247929 60247939 SP1 JASPAR yes 55189173
chr17 60247932 60247937 SP1 TRANSFAC yes 21269558
chr17 60247932 60247937 SP1 TRANSFAC yes 55189174
chr17 60247934 60247939 TFAP2A TRANSFAC yes 21269559
chr17 60247934 60247939 TFAP2A TRANSFAC yes 55189175
chr17 60247934 60247940 MZF1 JASPAR yes 21269560
chr17 60247934 60247940 MZF1 JASPAR yes 55189176
chr17 60247935 60247949 RXRG JASPAR yes 21269561
chr17 60247935 60247949 RXRG JASPAR yes 55189177
chr17 60247993 60247997 YY1 TRANSFAC yes 21269562
chr17 60247993 60247997 YY1 TRANSFAC yes 55189178
chr17 60247994 60248009 MEF2C JASPAR yes 21269563
chr17 60247994 60248009 MEF2C JASPAR yes 55189179
chr17 60247997 60248001 YY1 TRANSFAC yes 21269564
chr17 60247997 60248001 YY1 TRANSFAC yes 55189180
chr17 60248011 60248022 STAT3 JASPAR yes 21269565
chr17 60248011 60248022 STAT3 JASPAR yes 55189181
chr17 60248018 60248037 REST JASPAR yes 21269566
chr17 60248018 60248037 REST JASPAR yes 55189182
chr17 60248028 60248041 HSF4 JASPAR yes 21269567
chr17 60248028 60248041 HSF4 JASPAR yes 55189183
chr17 60248055 60248059 NFE TRANSFAC yes 21269568
chr17 60248055 60248059 NFE TRANSFAC yes 55189184
chr17 60248056 60248061 GATA2 JASPAR yes 21269569
chr17 60248056 60248061 GATA2 JASPAR yes 55189185
chr17 60248061 60248069 FOXL1 JASPAR yes 21269570
chr17 60248061 60248069 FOXL1 JASPAR yes 55189186
SNP sites on vista25425[chr17:60247601-60248070]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 60247722 rs114391536 C T
EP300 RCOR1
4971914
chr17 60247723 rs187565949 G C
EP300 ESX1 GBX1 GBX2 GSX1 GSX2 HESX1 LBX2 LHX2 MNX1 RAX RCOR1 VENTX
4971915
chr17 60247727 rs12451501 A G
BARX1 BSX DLX6 EP300 ESX1 GBX1 GBX2 GSX1 GSX2 H1TF2 HESX1 ISX LBX1 LBX2 LHX2 LHX9 MNX1 MSX1 MSX2 NFE NKX6-2 ONECUT2 ONECUT3 PRRX1 RAX RAX2 RCOR1 SHOX SRF UNCX VENTX
4971916
chr17 60247813 rs78257795 C T
EP300 POLR2A RCOR1 SOX4
4971917
chr17 60248035 rs566017454 A G
EP300 HSF4 POLR2A RCOR1 REST
4971918
Genes possibly regulated by vista25425[chr17:60247601-60248070]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista25425[chr17:60247601-60248070]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results