EnhancerDB
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  3. vista25440[chr17:60729712-60730300]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25440[chr17:60729712-60730300]
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Tissue distribution of vista25440
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Transcription factor that possibly regulate vista25440[chr17:60729712-60730300]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 60729529 60731484 POLR2A UCSC Txn Factor no Conserved 108280518
chr17 60729562 60730422 E2F1 UCSC Txn Factor no Conserved 108280520
chr17 60729611 60730293 MYC UCSC Txn Factor no Conserved 108280527
chr17 60729842 60730058 FOXA1 UCSC Txn Factor no Conserved 108280577
chr17 60729726 60729730 NFE TRANSFAC yes 21270043
chr17 60729726 60729730 NFE TRANSFAC yes 55203554
chr17 60729738 60729753 ZBTB33 JASPAR yes 21270044
chr17 60729738 60729753 ZBTB33 JASPAR yes 55203555
chr17 60729738 60729755 RARA JASPAR yes 21270045
chr17 60729738 60729755 RARA JASPAR yes 55203556
chr17 60729739 60729743 H4TF2 TRANSFAC yes 21270046
chr17 60729739 60729743 H4TF2 TRANSFAC yes 55203557
chr17 60729741 60729756 ZBTB33 JASPAR yes 21270047
chr17 60729741 60729756 ZBTB33 JASPAR yes 55203558
chr17 60729742 60729755 TFAP2A JASPAR yes 21270048
chr17 60729742 60729755 TFAP2B JASPAR yes 21270049
chr17 60729742 60729755 TFAP2C JASPAR yes 21270050
chr17 60729742 60729755 TFAP2A JASPAR yes 55203559
chr17 60729742 60729755 TFAP2B JASPAR yes 55203560
chr17 60729742 60729755 TFAP2C JASPAR yes 55203561
chr17 60729750 60729754 LFA1 TRANSFAC yes 21270051
chr17 60729750 60729754 LFA1 TRANSFAC yes 55203562
chr17 60729787 60729797 SP1 JASPAR yes 21270052
chr17 60729787 60729797 SP1 JASPAR yes 55203563
chr17 60729789 60729794 SP1 TRANSFAC yes 21270053
chr17 60729789 60729794 SP1 TRANSFAC yes 55203564
chr17 60729789 60729795 SP1 TRANSFAC yes 21270054
chr17 60729789 60729795 SP1 TRANSFAC yes 55203565
chr17 60729789 60729796 SP1 TRANSFAC yes 21270055
chr17 60729789 60729796 SP1 TRANSFAC yes 55203566
chr17 60729790 60729798 WT1 TRANSFAC yes 21270056
chr17 60729790 60729798 WT1 TRANSFAC yes 55203567
chr17 60729805 60729809 H4TF2 TRANSFAC yes 21270057
chr17 60729805 60729809 H4TF2 TRANSFAC yes 55203568
chr17 60729816 60729831 NR2C2 JASPAR yes 21270058
chr17 60729816 60729831 NR2C2 JASPAR yes 55203569
chr17 60729822 60729831 THAP1 JASPAR yes 21270059
chr17 60729822 60729831 THAP1 JASPAR yes 55203570
chr17 60729838 60729842 ESR1 TRANSFAC yes 21270060
chr17 60729838 60729842 ESR1 TRANSFAC yes 55203571
chr17 60729870 60729881 ELK4 JASPAR yes 21270061
chr17 60729870 60729881 FLI1 JASPAR yes 21270062
chr17 60729870 60729881 ELK4 JASPAR yes 55203572
chr17 60729870 60729881 FLI1 JASPAR yes 55203573
chr17 60729871 60729881 ERF JASPAR yes 21270063
chr17 60729871 60729881 ETS1 JASPAR yes 21270064
chr17 60729871 60729881 ETV6 JASPAR yes 21270065
chr17 60729871 60729881 GABPA JASPAR yes 21270066
chr17 60729871 60729881 ERF JASPAR yes 55203574
chr17 60729871 60729881 ETS1 JASPAR yes 55203575
chr17 60729871 60729881 ETV6 JASPAR yes 55203576
chr17 60729871 60729881 GABPA JASPAR yes 55203577
chr17 60729871 60729884 ELF1 JASPAR yes 21270067
chr17 60729871 60729884 ELF1 JASPAR yes 55203578
chr17 60729871 60729886 ZIC3 JASPAR yes 21270068
chr17 60729871 60729886 ZIC3 JASPAR yes 55203579
chr17 60729872 60729879 SPI1 JASPAR yes 21270069
chr17 60729872 60729879 SPI1 JASPAR yes 55203580
chr17 60729872 60729880 EHF JASPAR yes 21270070
chr17 60729872 60729880 FEV JASPAR yes 21270071
chr17 60729872 60729880 EHF JASPAR yes 55203581
chr17 60729872 60729880 FEV JASPAR yes 55203582
chr17 60729876 60729889 ZBED1 JASPAR yes 21270072
chr17 60729876 60729889 ZBED1 JASPAR yes 55203583
chr17 60729905 60729916 NFKB1 JASPAR yes 21270073
chr17 60729905 60729916 NFKB1 JASPAR yes 55203584
chr17 60729906 60729916 NFKB1 JASPAR yes 21270074
chr17 60729906 60729916 REL JASPAR yes 21270075
chr17 60729906 60729916 NFKB1 JASPAR yes 55203585
chr17 60729906 60729916 REL JASPAR yes 55203586
chr17 60729911 60729921 ZNF740 JASPAR yes 21270076
chr17 60729911 60729921 ZNF740 JASPAR yes 55203587
chr17 60729913 60729926 TFAP2A JASPAR yes 21270077
chr17 60729913 60729926 TFAP2B JASPAR yes 21270078
chr17 60729913 60729926 TFAP2C JASPAR yes 21270079
chr17 60729913 60729926 TFAP2A JASPAR yes 55203588
chr17 60729913 60729926 TFAP2B JASPAR yes 55203589
chr17 60729913 60729926 TFAP2C JASPAR yes 55203590
chr17 60729921 60729934 ELF1 JASPAR yes 21270080
chr17 60729921 60729934 ELF1 JASPAR yes 55203591
chr17 60729922 60729927 ETS2 TRANSFAC yes 21270081
chr17 60729922 60729927 ETS2 TRANSFAC yes 55203592
chr17 60729924 60729935 FLI1 JASPAR yes 21270082
chr17 60729924 60729935 FLI1 JASPAR yes 55203593
chr17 60729925 60729930 ETS2 TRANSFAC yes 21270083
chr17 60729925 60729930 ETS2 TRANSFAC yes 55203594
chr17 60729925 60729933 FEV JASPAR yes 21270084
chr17 60729925 60729933 FEV JASPAR yes 55203595
chr17 60729926 60729933 SPI1 JASPAR yes 21270085
chr17 60729926 60729933 SPI1 JASPAR yes 55203596
chr17 60729940 60729955 FOXA1 JASPAR yes 21270086
chr17 60729940 60729955 FOXA1 JASPAR yes 55203597
chr17 60729941 60729953 FOXI1 JASPAR yes 21270087
chr17 60729941 60729953 FOXI1 JASPAR yes 55203598
chr17 60729941 60729956 FOXP1 JASPAR yes 21270088
chr17 60729941 60729956 FOXP1 JASPAR yes 55203599
chr17 60729942 60729953 FOXP2 JASPAR yes 21270089
chr17 60729942 60729953 FOXP2 JASPAR yes 55203600
chr17 60729942 60729954 FOXC2 JASPAR yes 21270090
chr17 60729942 60729954 FOXC2 JASPAR yes 55203601
chr17 60729942 60729956 FOXF2 JASPAR yes 21270091
chr17 60729942 60729956 FOXF2 JASPAR yes 55203602
chr17 60729944 60729955 FOXA1 JASPAR yes 21270092
chr17 60729944 60729955 FOXH1 JASPAR yes 21270093
chr17 60729944 60729955 FOXA1 JASPAR yes 55203603
chr17 60729944 60729955 FOXH1 JASPAR yes 55203604
chr17 60729948 60729952 YY1 TRANSFAC yes 21270094
chr17 60729948 60729952 YY1 TRANSFAC yes 55203605
chr17 60729952 60729966 TLX1 JASPAR yes 21270095
chr17 60729952 60729966 TLX1 JASPAR yes 55203606
chr17 60729953 60729965 TFAP2A JASPAR yes 21270096
chr17 60729953 60729965 TFAP2A JASPAR yes 55203607
chr17 60729969 60729990 REST JASPAR yes 21270097
chr17 60729969 60729990 REST JASPAR yes 55203608
chr17 60729980 60729984 LFA1 TRANSFAC yes 21270098
chr17 60729980 60729984 LFA1 TRANSFAC yes 55203609
chr17 60729985 60729997 GLI2 JASPAR yes 21270099
chr17 60729985 60729997 GLI2 JASPAR yes 55203610
chr17 60729985 60730003 ESR1 JASPAR yes 21270100
chr17 60729985 60730003 ESR1 JASPAR yes 55203611
chr17 60730000 60730004 LFA1 TRANSFAC yes 21270101
chr17 60730000 60730004 LFA1 TRANSFAC yes 55203612
chr17 60730003 60730007 YY1 TRANSFAC yes 21270102
chr17 60730003 60730007 YY1 TRANSFAC yes 55203613
chr17 60730015 60730026 E2F1 JASPAR yes 21270103
chr17 60730015 60730026 E2F1 JASPAR yes 55203614
chr17 60730016 60730021 SP1 TRANSFAC yes 21270104
chr17 60730016 60730021 SP1 TRANSFAC yes 55203615
chr17 60730016 60730027 E2F4 JASPAR yes 21270105
chr17 60730016 60730027 E2F6 JASPAR yes 21270106
chr17 60730016 60730027 E2F4 JASPAR yes 55203616
chr17 60730016 60730027 E2F6 JASPAR yes 55203617
chr17 60730017 60730022 SP1 TRANSFAC yes 21270107
chr17 60730017 60730022 SP1 TRANSFAC yes 55203618
chr17 60730021 60730040 PAX5 JASPAR yes 21270108
chr17 60730021 60730040 PAX5 JASPAR yes 55203619
chr17 60730021 60730042 ZNF263 JASPAR yes 21270109
chr17 60730021 60730042 ZNF263 JASPAR yes 55203620
chr17 60730023 60730028 SP1 TRANSFAC yes 21270110
chr17 60730023 60730028 SP1 TRANSFAC yes 55203621
chr17 60730024 60730041 PAX1 JASPAR yes 21270111
chr17 60730024 60730041 PAX1 JASPAR yes 55203622
chr17 60730030 60730041 E2F1 JASPAR yes 21270112
chr17 60730030 60730041 E2F1 JASPAR yes 55203623
chr17 60730031 60730042 E2F4 JASPAR yes 21270113
chr17 60730031 60730042 E2F6 JASPAR yes 21270114
chr17 60730031 60730042 E2F4 JASPAR yes 55203624
chr17 60730031 60730042 E2F6 JASPAR yes 55203625
chr17 60730032 60730043 ELF5 JASPAR yes 21270115
chr17 60730032 60730043 ELF5 JASPAR yes 55203626
chr17 60730035 60730040 ETS2 TRANSFAC yes 21270116
chr17 60730035 60730040 ETS2 TRANSFAC yes 55203627
chr17 60730054 60730068 PLAG1 JASPAR yes 21270117
chr17 60730054 60730068 PLAG1 JASPAR yes 55203628
chr17 60730068 60730079 E2F6 JASPAR yes 21270118
chr17 60730068 60730079 E2F6 JASPAR yes 55203629
chr17 60730070 60730078 SP1 TRANSFAC yes 21270119
chr17 60730070 60730078 SP1 TRANSFAC yes 55203630
chr17 60730070 60730080 SP1 JASPAR yes 21270120
chr17 60730070 60730080 SP1 JASPAR yes 55203631
chr17 60730072 60730078 MAZ TRANSFAC yes 21270121
chr17 60730072 60730078 MAZ TRANSFAC yes 55203632
chr17 60730088 60730098 SP1 JASPAR yes 21270122
chr17 60730088 60730098 SP1 JASPAR yes 55203633
chr17 60730094 60730108 PLAG1 JASPAR yes 21270123
chr17 60730094 60730108 PLAG1 JASPAR yes 55203634
chr17 60730095 60730112 ESR1 JASPAR yes 21270124
chr17 60730095 60730112 ESR1 JASPAR yes 55203635
chr17 60730105 60730119 SPIC JASPAR yes 21270125
chr17 60730105 60730119 SPIC JASPAR yes 55203636
chr17 60730106 60730119 ELF1 JASPAR yes 21270126
chr17 60730106 60730119 ELF1 JASPAR yes 55203637
chr17 60730109 60730116 SPIB JASPAR yes 21270127
chr17 60730109 60730116 SPIB JASPAR yes 55203638
chr17 60730109 60730119 ETV6 JASPAR yes 21270128
chr17 60730109 60730119 GABPA JASPAR yes 21270129
chr17 60730109 60730119 ETV6 JASPAR yes 55203639
chr17 60730109 60730119 GABPA JASPAR yes 55203640
chr17 60730109 60730120 ELK4 JASPAR yes 21270130
chr17 60730109 60730120 FLI1 JASPAR yes 21270131
chr17 60730109 60730120 ELK4 JASPAR yes 55203641
chr17 60730109 60730120 FLI1 JASPAR yes 55203642
chr17 60730110 60730118 EHF JASPAR yes 21270132
chr17 60730110 60730118 EHF JASPAR yes 55203643
chr17 60730111 60730118 SPI1 JASPAR yes 21270133
chr17 60730111 60730118 SPI1 JASPAR yes 55203644
chr17 60730113 60730129 E2F2 JASPAR yes 21270134
chr17 60730113 60730129 E2F2 JASPAR yes 55203645
chr17 60730126 60730136 ZNF740 JASPAR yes 21270135
chr17 60730126 60730136 ZNF740 JASPAR yes 55203646
chr17 60730126 60730138 ZBTB7B JASPAR yes 21270136
chr17 60730126 60730138 ZBTB7B JASPAR yes 55203647
chr17 60730140 60730146 YY1 JASPAR yes 21270137
chr17 60730140 60730146 YY1 JASPAR yes 55203648
chr17 60730142 60730154 INSM1 JASPAR yes 21270138
chr17 60730142 60730154 INSM1 JASPAR yes 55203649
chr17 60730147 60730156 SP1 TRANSFAC yes 21270139
chr17 60730147 60730156 SP1 TRANSFAC yes 55203650
chr17 60730147 60730157 SP1 JASPAR yes 21270140
chr17 60730147 60730157 SP1 JASPAR yes 55203651
chr17 60730149 60730155 MAZ TRANSFAC yes 21270141
chr17 60730149 60730155 MAZ TRANSFAC yes 55203652
chr17 60730164 60730175 E2F6 JASPAR yes 21270142
chr17 60730164 60730175 E2F6 JASPAR yes 55203653
chr17 60730166 60730174 SP1 TRANSFAC yes 21270143
chr17 60730166 60730174 SP1 TRANSFAC yes 55203654
chr17 60730166 60730176 SP1 JASPAR yes 21270144
chr17 60730166 60730176 SP1 JASPAR yes 55203655
chr17 60730168 60730174 MAZ TRANSFAC yes 21270145
chr17 60730168 60730174 MAZ TRANSFAC yes 55203656
chr17 60730173 60730177 LFA1 TRANSFAC yes 21270146
chr17 60730173 60730177 LFA1 TRANSFAC yes 55203657
chr17 60730184 60730189 SP1 TRANSFAC yes 21270147
chr17 60730184 60730189 SP1 TRANSFAC yes 55203658
chr17 60730184 60730190 SP1 TRANSFAC yes 21270148
chr17 60730184 60730190 SP1 TRANSFAC yes 55203659
chr17 60730187 60730197 SP1 JASPAR yes 21270149
chr17 60730187 60730197 SP1 JASPAR yes 55203660
chr17 60730188 60730197 SP1 TRANSFAC yes 21270150
chr17 60730188 60730197 SP1 TRANSFAC yes 55203661
chr17 60730188 60730198 SP1 JASPAR yes 21270151
chr17 60730188 60730198 SP1 JASPAR yes 55203662
chr17 60730190 60730196 MAZ TRANSFAC yes 21270152
chr17 60730190 60730196 MAZ TRANSFAC yes 55203663
chr17 60730228 60730233 TFAP2A TRANSFAC yes 21270153
chr17 60730228 60730233 TFAP2A TRANSFAC yes 55203664
chr17 60730228 60730234 MZF1 JASPAR yes 21270154
chr17 60730228 60730234 MZF1 JASPAR yes 55203665
chr17 60730228 60730238 SP1 JASPAR yes 21270155
chr17 60730228 60730238 SP1 JASPAR yes 55203666
chr17 60730230 60730236 MAZ TRANSFAC yes 21270156
chr17 60730230 60730236 MAZ TRANSFAC yes 55203667
chr17 60730262 60730268 YY1 JASPAR yes 21270157
chr17 60730262 60730268 YY1 JASPAR yes 55203668
chr17 60730265 60730270 SP1 TRANSFAC yes 21270158
chr17 60730265 60730270 SP1 TRANSFAC yes 55203669
chr17 60730265 60730271 SP1 TRANSFAC yes 21270159
chr17 60730265 60730271 SP1 TRANSFAC yes 55203670
chr17 60730268 60730278 SP1 JASPAR yes 21270160
chr17 60730268 60730278 SP1 JASPAR yes 55203671
chr17 60730269 60730279 SP1 JASPAR yes 21270161
chr17 60730269 60730279 SP1 JASPAR yes 55203672
chr17 60730270 60730274 LFA1 TRANSFAC yes 21270162
chr17 60730270 60730274 LFA1 TRANSFAC yes 55203673
chr17 60730274 60730285 NFKB1 JASPAR yes 21270163
chr17 60730274 60730285 NFKB1 JASPAR yes 55203674
chr17 60730279 60730293 EBF1 JASPAR yes 21270164
chr17 60730279 60730293 EBF1 JASPAR yes 55203675
chr17 60730280 60730291 EBF1 JASPAR yes 21270165
chr17 60730280 60730291 EBF1 JASPAR yes 55203676
chr17 60730281 60730292 EBF1 JASPAR yes 21270166
chr17 60730281 60730292 EBF1 JASPAR yes 55203677
SNP sites on vista25440[chr17:60729712-60730300]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 60729914 rs529974197 C T
E2F1 FOXA1 MYC NFKB1 POLR2A REL TFAP2A TFAP2B TFAP2C ZNF740
4973653
chr17 60729941 rs533647645 G A
E2F1 FOXA1 FOXI1 FOXP1 MYC POLR2A
4973654
chr17 60729945 rs543480079 T G
E2F1 FOXA1 FOXC2 FOXF2 FOXH1 FOXI1 FOXP1 FOXP2 MYC POLR2A
4973655
chr17 60730279 rs566130218 G T
E2F1 EBF1 MYC NFKB1 POLR2A SP1
4973656
Genes possibly regulated by vista25440[chr17:60729712-60730300]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 60704762 60770958 + MRC2 ENSG00000011028.9 60704762 0.87 1.0 16130 75050
Expression level of Genes
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miRNAs possibly regulated by vista25440[chr17:60729712-60730300]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results