EnhancerDB
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  3. vista25442[chr17:60780424-60780717]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25442[chr17:60780424-60780717]
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Tissue distribution of vista25442
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Transcription factor that possibly regulate vista25442[chr17:60780424-60780717]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 60780424 60780439 RFX5 JASPAR yes 21270207
chr17 60780424 60780439 RFX5 JASPAR yes 55207066
chr17 60780433 60780437 LFA1 TRANSFAC yes 21270208
chr17 60780433 60780437 LFA1 TRANSFAC yes 55207067
chr17 60780443 60780456 NFKB2 JASPAR yes 21270209
chr17 60780443 60780456 NFKB2 JASPAR yes 55207068
chr17 60780444 60780454 NFKB1 JASPAR yes 21270210
chr17 60780444 60780454 NFKB1 JASPAR yes 55207069
chr17 60780444 60780455 NFKB1 JASPAR yes 21270211
chr17 60780444 60780455 NFKB1 JASPAR yes 55207070
chr17 60780451 60780457 MZF1 JASPAR yes 21270212
chr17 60780451 60780457 MZF1 JASPAR yes 55207071
chr17 60780452 60780464 NHLH1 JASPAR yes 21270213
chr17 60780452 60780464 NHLH1 JASPAR yes 55207072
chr17 60780453 60780463 NHLH1 JASPAR yes 21270214
chr17 60780453 60780463 NHLH1 JASPAR yes 55207073
chr17 60780458 60780467 THAP1 JASPAR yes 21270215
chr17 60780458 60780467 THAP1 JASPAR yes 55207074
chr17 60780464 60780467 MYB TRANSFAC yes 21270216
chr17 60780464 60780467 MYB TRANSFAC yes 55207075
chr17 60780466 60780484 IRF2 JASPAR yes 21270217
chr17 60780466 60780484 IRF2 JASPAR yes 55207076
chr17 60780471 60780485 IRF8 JASPAR yes 21270218
chr17 60780471 60780485 IRF8 JASPAR yes 55207077
chr17 60780471 60780486 IRF9 JASPAR yes 21270219
chr17 60780471 60780486 IRF9 JASPAR yes 55207078
chr17 60780473 60780488 SCRT1 JASPAR yes 21270220
chr17 60780473 60780488 SCRT1 JASPAR yes 55207079
chr17 60780475 60780488 SCRT2 JASPAR yes 21270221
chr17 60780475 60780488 SCRT2 JASPAR yes 55207080
chr17 60780485 60780489 YY1 TRANSFAC yes 21270222
chr17 60780485 60780489 YY1 TRANSFAC yes 55207081
chr17 60780506 60780516 BHLHE40 JASPAR yes 21270223
chr17 60780506 60780516 BHLHE40 JASPAR yes 55207082
chr17 60780508 60780513 MYC TRANSFAC yes 21270224
chr17 60780508 60780513 USF1 TRANSFAC yes 21270225
chr17 60780508 60780513 USF2 TRANSFAC yes 21270226
chr17 60780508 60780513 MYC TRANSFAC yes 55207083
chr17 60780508 60780513 USF1 TRANSFAC yes 55207084
chr17 60780508 60780513 USF2 TRANSFAC yes 55207085
chr17 60780517 60780523 MAZ TRANSFAC yes 21270227
chr17 60780517 60780523 MAZ TRANSFAC yes 55207086
chr17 60780517 60780527 SP1 JASPAR yes 21270228
chr17 60780517 60780527 SP1 JASPAR yes 55207087
chr17 60780523 60780528 SP1 TRANSFAC yes 21270229
chr17 60780523 60780528 SP1 TRANSFAC yes 55207088
chr17 60780530 60780534 ESR1 TRANSFAC yes 21270230
chr17 60780530 60780534 ESR1 TRANSFAC yes 55207089
chr17 60780531 60780542 NRL JASPAR yes 21270231
chr17 60780531 60780542 NRL JASPAR yes 55207090
chr17 60780547 60780551 LFA1 TRANSFAC yes 21270232
chr17 60780547 60780551 LFA1 TRANSFAC yes 55207091
chr17 60780562 60780568 SOX10 JASPAR yes 21270233
chr17 60780562 60780568 SOX10 JASPAR yes 55207092
chr17 60780567 60780580 SMAD2 JASPAR yes 21270234
chr17 60780567 60780580 SMAD2 JASPAR yes 55207093
chr17 60780597 60780610 ZBTB18 JASPAR yes 21270235
chr17 60780597 60780610 ZBTB18 JASPAR yes 55207094
chr17 60780645 60780649 LFA1 TRANSFAC yes 21270236
chr17 60780645 60780649 LFA1 TRANSFAC yes 55207095
chr17 60780653 60780657 ESR1 TRANSFAC yes 21270237
chr17 60780653 60780657 ESR1 TRANSFAC yes 55207096
chr17 60780655 60780667 PKNOX1 JASPAR yes 21270238
chr17 60780655 60780667 PKNOX2 JASPAR yes 21270239
chr17 60780655 60780667 TGIF1 JASPAR yes 21270240
chr17 60780655 60780667 TGIF2 JASPAR yes 21270241
chr17 60780655 60780667 PKNOX1 JASPAR yes 55207097
chr17 60780655 60780667 PKNOX2 JASPAR yes 55207098
chr17 60780655 60780667 TGIF1 JASPAR yes 55207099
chr17 60780655 60780667 TGIF2 JASPAR yes 55207100
chr17 60780656 60780666 NHLH1 JASPAR yes 21270242
chr17 60780656 60780666 TFAP4 JASPAR yes 21270243
chr17 60780656 60780666 NHLH1 JASPAR yes 55207101
chr17 60780656 60780666 TFAP4 JASPAR yes 55207102
chr17 60780658 60780672 JUN JASPAR yes 21270244
chr17 60780658 60780672 JUN JASPAR yes 55207103
chr17 60780661 60780672 FOSL2 JASPAR yes 21270245
chr17 60780661 60780672 JUNB JASPAR yes 21270246
chr17 60780661 60780672 FOSL2 JASPAR yes 55207104
chr17 60780661 60780672 JUNB JASPAR yes 55207105
chr17 60780662 60780673 FOS JASPAR yes 21270247
chr17 60780662 60780673 FOSL1 JASPAR yes 21270248
chr17 60780662 60780673 JUND JASPAR yes 21270249
chr17 60780662 60780673 NFE2 JASPAR yes 21270250
chr17 60780662 60780673 FOS JASPAR yes 55207106
chr17 60780662 60780673 FOSL1 JASPAR yes 55207107
chr17 60780662 60780673 JUND JASPAR yes 55207108
chr17 60780662 60780673 NFE2 JASPAR yes 55207109
chr17 60780663 60780670 JUN TRANSFAC yes 21270251
chr17 60780663 60780670 JUN TRANSFAC yes 55207110
chr17 60780663 60780672 JDP2 JASPAR yes 21270252
chr17 60780663 60780672 JDP2 JASPAR yes 55207111
chr17 60780663 60780674 FOSL2 JASPAR yes 21270253
chr17 60780663 60780674 JUNB JASPAR yes 21270254
chr17 60780663 60780674 FOSL2 JASPAR yes 55207112
chr17 60780663 60780674 JUNB JASPAR yes 55207113
chr17 60780663 60780677 JUN JASPAR yes 21270255
chr17 60780663 60780677 JUN JASPAR yes 55207114
chr17 60780676 60780693 ZNF410 JASPAR yes 21270256
chr17 60780676 60780693 ZNF410 JASPAR yes 55207115
chr17 60780688 60780691 MYB TRANSFAC yes 21270257
chr17 60780688 60780691 MYB TRANSFAC yes 55207116
chr17 60780690 60780696 SOX10 JASPAR yes 21270258
chr17 60780690 60780696 SOX10 JASPAR yes 55207117
chr17 60780699 60780705 NFIC JASPAR yes 21270259
chr17 60780699 60780705 NFIC JASPAR yes 55207118
chr17 60780708 60780719 NFE2 JASPAR yes 21270260
chr17 60780708 60780719 NFE2 JASPAR yes 55207119
chr17 60780712 60780729 PAX9 JASPAR yes 21270261
chr17 60780712 60780729 PAX9 JASPAR yes 55207120
chr17 60780717 60780731 TLX1 JASPAR yes 21270262
chr17 60780717 60780731 TLX1 JASPAR yes 55207121
SNP sites on vista25442[chr17:60780424-60780717]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 60780473 rs181034611 G T
IRF2 IRF8 IRF9 SCRT1
4974094
chr17 60780486 rs145728281 C T
IRF9 SCRT1 SCRT2 YY1
4974095
chr17 60780579 rs148950106 C T
SMAD2
4974096
chr17 60780599 rs143689912 G A
ZBTB18
4974097
chr17 60780706 rs189573258 C G,T no 4974098
Genes possibly regulated by vista25442[chr17:60780424-60780717]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 60704762 60770958 + MRC2 ENSG00000011028.9 60704762 0.87 1.0 16130 24338
Expression level of Genes
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miRNAs possibly regulated by vista25442[chr17:60780424-60780717]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results