EnhancerDB
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  3. vista25443[chr17:60795868-60796183]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25443[chr17:60795868-60796183]
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Tissue distribution of vista25443
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Transcription factor that possibly regulate vista25443[chr17:60795868-60796183]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 60795518 60796488 GATA3 UCSC Txn Factor no Conserved 108280648
chr17 60795766 60796336 ZNF217 UCSC Txn Factor no Conserved 108280652
chr17 60795887 60796197 MYC UCSC Txn Factor no Conserved 108280661
chr17 60795912 60796209 POLR2A UCSC Txn Factor no Conserved 108280666
chr17 60795930 60796286 EP300 UCSC Txn Factor no Conserved 108280670
chr17 60795857 60795872 RUNX2 JASPAR yes 21270263
chr17 60795857 60795872 RUNX2 JASPAR yes 55208187
chr17 60795861 60795871 RUNX3 JASPAR yes 21270264
chr17 60795861 60795871 RUNX3 JASPAR yes 55208188
chr17 60795888 60795894 GATA3 JASPAR yes 21270265
chr17 60795888 60795894 GATA3 JASPAR yes 55208189
chr17 60795900 60795904 LFA1 TRANSFAC yes 21270266
chr17 60795900 60795904 LFA1 TRANSFAC yes 55208190
chr17 60795914 60795919 MYC TRANSFAC yes 21270267
chr17 60795914 60795919 USF1 TRANSFAC yes 21270268
chr17 60795914 60795919 USF2 TRANSFAC yes 21270269
chr17 60795914 60795919 MYC TRANSFAC yes 55208191
chr17 60795914 60795919 USF1 TRANSFAC yes 55208192
chr17 60795914 60795919 USF2 TRANSFAC yes 55208193
chr17 60795914 60795921 USF1 JASPAR yes 21270270
chr17 60795914 60795921 USF1 JASPAR yes 55208194
chr17 60795917 60795931 XBP1 JASPAR yes 21270271
chr17 60795917 60795931 XBP1 JASPAR yes 55208195
chr17 60795969 60795973 YY1 TRANSFAC yes 21270272
chr17 60795969 60795973 YY1 TRANSFAC yes 55208196
chr17 60795986 60795990 NFE TRANSFAC yes 21270273
chr17 60795986 60795990 NFE TRANSFAC yes 55208197
chr17 60795989 60796008 REST JASPAR yes 21270274
chr17 60795989 60796008 REST JASPAR yes 55208198
chr17 60795997 60796010 SMAD2 JASPAR yes 21270275
chr17 60795997 60796010 SMAD2 JASPAR yes 55208199
chr17 60795998 60796015 RXRA JASPAR yes 21270276
chr17 60795998 60796015 RXRA JASPAR yes 55208200
chr17 60796002 60796014 PKNOX2 JASPAR yes 21270277
chr17 60796002 60796014 PKNOX2 JASPAR yes 55208201
chr17 60796003 60796014 USF1 JASPAR yes 21270278
chr17 60796003 60796014 USF1 JASPAR yes 55208202
chr17 60796005 60796010 USF2 TRANSFAC yes 21270279
chr17 60796005 60796010 USF2 TRANSFAC yes 55208203
chr17 60796005 60796018 NR2F1 JASPAR yes 21270280
chr17 60796005 60796018 NR2F1 JASPAR yes 55208204
chr17 60796009 60796017 CREB1 JASPAR yes 21270281
chr17 60796009 60796017 CREB1 JASPAR yes 55208205
chr17 60796009 60796023 NR2F1 JASPAR yes 21270282
chr17 60796009 60796023 NR2F1 JASPAR yes 55208206
chr17 60796009 60796024 TFAP2A JASPAR yes 21270283
chr17 60796009 60796024 TFAP2A JASPAR yes 55208207
chr17 60796045 60796049 YY1 TRANSFAC yes 21270284
chr17 60796045 60796049 YY1 TRANSFAC yes 55208208
chr17 60796070 60796082 TEAD1 JASPAR yes 21270285
chr17 60796070 60796082 TEAD1 JASPAR yes 55208209
chr17 60796072 60796082 TEAD1 JASPAR yes 21270286
chr17 60796072 60796082 TEAD4 JASPAR yes 21270287
chr17 60796072 60796082 TEAD1 JASPAR yes 55208210
chr17 60796072 60796082 TEAD4 JASPAR yes 55208211
chr17 60796073 60796081 TEAD3 JASPAR yes 21270288
chr17 60796073 60796081 TEAD3 JASPAR yes 55208212
chr17 60796088 60796099 FOXP2 JASPAR yes 21270289
chr17 60796088 60796099 FOXP2 JASPAR yes 55208213
chr17 60796109 60796125 ZNF143 JASPAR yes 21270290
chr17 60796109 60796125 ZNF143 JASPAR yes 55208214
chr17 60796125 60796144 PAX5 JASPAR yes 21270291
chr17 60796125 60796144 PAX5 JASPAR yes 55208215
chr17 60796132 60796142 SREBF1 JASPAR yes 21270292
chr17 60796132 60796142 SREBF1 JASPAR yes 55208216
chr17 60796157 60796173 SOX8 JASPAR yes 21270293
chr17 60796157 60796173 SOX8 JASPAR yes 55208217
chr17 60796162 60796166 YY1 TRANSFAC yes 21270294
chr17 60796162 60796166 YY1 TRANSFAC yes 55208218
chr17 60796166 60796170 YY1 TRANSFAC yes 21270295
chr17 60796166 60796170 YY1 TRANSFAC yes 55208219
chr17 60796180 60796201 ZNF263 JASPAR yes 21270296
chr17 60796180 60796201 ZNF263 JASPAR yes 55208220
chr17 60796181 60796202 ZNF263 JASPAR yes 21270297
chr17 60796181 60796202 ZNF263 JASPAR yes 55208221
SNP sites on vista25443[chr17:60795868-60796183]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 60795874 rs542001164 G A
GATA3 ZNF217
4974244
chr17 60795898 rs139294544 T G
GATA3 MYC ZNF217
4974245
chr17 60795953 rs144293374 C T
EP300 GATA3 MYC POLR2A ZNF217
4974246
chr17 60795954 rs114995753 G A
EP300 GATA3 MYC POLR2A ZNF217
4974247
chr17 60795998 rs79797770 C T
EP300 GATA3 MYC POLR2A REST RXRA SMAD2 ZNF217
4974248
chr17 60796001 rs114471895 A G
EP300 GATA3 MYC POLR2A REST RXRA SMAD2 ZNF217
4974249
chr17 60796074 rs9916015 A G
EP300 GATA3 MYC POLR2A TEAD1 TEAD3 TEAD4 ZNF217
4974250
chr17 60796099 rs73992039 G A
EP300 FOXP2 GATA3 MYC POLR2A ZNF217
4974251
chr17 60796125 rs34672337 A G
EP300 GATA3 MYC PAX5 POLR2A ZNF143 ZNF217
4974252
chr17 60796175 rs78285456 A C
EP300 GATA3 MYC POLR2A ZNF217
4974253
Genes possibly regulated by vista25443[chr17:60795868-60796183]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 60704762 60770958 + MRC2 ENSG00000011028.9 60704762 0.87 1.0 16130 8894
chr17 60778675 60885705 - MARCH10 ENSG00000173838.7 60885705 0.95 0.94 16131 10478
Expression level of Genes
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miRNAs possibly regulated by vista25443[chr17:60795868-60796183]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results