EnhancerDB
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  3. vista25444[chr17:60827722-60828206]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25444[chr17:60827722-60828206]
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Tissue distribution of vista25444
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Transcription factor that possibly regulate vista25444[chr17:60827722-60828206]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 60827711 60827722 E2F6 JASPAR yes 21270298
chr17 60827711 60827722 E2F6 JASPAR yes 55209568
chr17 60827723 60827726 MYB TRANSFAC yes 21270299
chr17 60827723 60827726 MYB TRANSFAC yes 55209569
chr17 60827731 60827752 ZNF263 JASPAR yes 21270300
chr17 60827731 60827752 ZNF263 JASPAR yes 55209570
chr17 60827763 60827768 TFAP2A TRANSFAC yes 21270301
chr17 60827763 60827768 TFAP2A TRANSFAC yes 55209571
chr17 60827763 60827769 MZF1 JASPAR yes 21270302
chr17 60827763 60827769 MZF1 JASPAR yes 55209572
chr17 60827768 60827780 PKNOX2 JASPAR yes 21270303
chr17 60827768 60827780 PKNOX2 JASPAR yes 55209573
chr17 60827769 60827778 SNAI2 JASPAR yes 21270304
chr17 60827769 60827778 SNAI2 JASPAR yes 55209574
chr17 60827783 60827802 CTCF JASPAR yes 21270305
chr17 60827783 60827802 CTCF JASPAR yes 55209575
chr17 60827800 60827808 HOXA5 JASPAR yes 21270306
chr17 60827800 60827808 HOXA5 JASPAR yes 55209576
chr17 60827801 60827811 EN2 JASPAR yes 21270307
chr17 60827801 60827811 ESX1 JASPAR yes 21270308
chr17 60827801 60827811 GBX1 JASPAR yes 21270309
chr17 60827801 60827811 EN2 JASPAR yes 55209577
chr17 60827801 60827811 ESX1 JASPAR yes 55209578
chr17 60827801 60827811 GBX1 JASPAR yes 55209579
chr17 60827802 60827810 BSX JASPAR yes 21270310
chr17 60827802 60827810 DLX6 JASPAR yes 21270311
chr17 60827802 60827810 MSX1 JASPAR yes 21270312
chr17 60827802 60827810 MSX2 JASPAR yes 21270313
chr17 60827802 60827810 BSX JASPAR yes 55209580
chr17 60827802 60827810 DLX6 JASPAR yes 55209581
chr17 60827802 60827810 MSX1 JASPAR yes 55209582
chr17 60827802 60827810 MSX2 JASPAR yes 55209583
chr17 60827818 60827839 REST JASPAR yes 21270314
chr17 60827818 60827839 REST JASPAR yes 55209584
chr17 60827869 60827883 ZIC1 JASPAR yes 21270315
chr17 60827869 60827883 ZIC1 JASPAR yes 55209585
chr17 60827869 60827884 AR JASPAR yes 21270316
chr17 60827869 60827884 AR JASPAR yes 55209586
chr17 60827893 60827902 SNAI2 JASPAR yes 21270317
chr17 60827893 60827902 SNAI2 JASPAR yes 55209587
chr17 60827894 60827899 USF2 TRANSFAC yes 21270318
chr17 60827894 60827899 USF2 TRANSFAC yes 55209588
chr17 60827916 60827929 ELF1 JASPAR yes 21270319
chr17 60827916 60827929 ELF1 JASPAR yes 55209589
chr17 60827919 60827930 FLI1 JASPAR yes 21270320
chr17 60827919 60827930 FLI1 JASPAR yes 55209590
chr17 60827937 60827942 SP1 TRANSFAC yes 21270321
chr17 60827937 60827942 SP1 TRANSFAC yes 55209591
chr17 60827938 60827948 ZNF740 JASPAR yes 21270322
chr17 60827938 60827948 ZNF740 JASPAR yes 55209592
chr17 60827943 60827948 ETS2 TRANSFAC yes 21270323
chr17 60827943 60827948 ETS2 TRANSFAC yes 55209593
chr17 60827977 60827992 SOX21 JASPAR yes 21270324
chr17 60827977 60827992 SOX21 JASPAR yes 55209594
chr17 60827994 60827998 H1TF2 TRANSFAC yes 21270325
chr17 60827994 60827998 NFE TRANSFAC yes 21270326
chr17 60827994 60827998 SRF TRANSFAC yes 21270327
chr17 60827994 60827998 H1TF2 TRANSFAC yes 55209595
chr17 60827994 60827998 NFE TRANSFAC yes 55209596
chr17 60827994 60827998 SRF TRANSFAC yes 55209597
chr17 60827994 60828005 ESRRA JASPAR yes 21270328
chr17 60827994 60828005 ESRRA JASPAR yes 55209598
chr17 60828025 60828038 TFAP2A JASPAR yes 21270329
chr17 60828025 60828038 TFAP2B JASPAR yes 21270330
chr17 60828025 60828038 TFAP2C JASPAR yes 21270331
chr17 60828025 60828038 TFAP2A JASPAR yes 55209599
chr17 60828025 60828038 TFAP2B JASPAR yes 55209600
chr17 60828025 60828038 TFAP2C JASPAR yes 55209601
chr17 60828025 60828041 ZNF143 JASPAR yes 21270332
chr17 60828025 60828041 ZNF143 JASPAR yes 55209602
chr17 60828026 60828037 EBF1 JASPAR yes 21270333
chr17 60828026 60828037 EBF1 JASPAR yes 55209603
chr17 60828034 60828044 ID4 JASPAR yes 21270334
chr17 60828034 60828044 TCF4 JASPAR yes 21270335
chr17 60828034 60828044 ID4 JASPAR yes 55209604
chr17 60828034 60828044 TCF4 JASPAR yes 55209605
chr17 60828036 60828041 USF2 TRANSFAC yes 21270336
chr17 60828036 60828041 USF2 TRANSFAC yes 55209606
chr17 60828067 60828077 HMBOX1 JASPAR yes 21270337
chr17 60828067 60828077 HMBOX1 JASPAR yes 55209607
chr17 60828069 60828072 MYB TRANSFAC yes 21270338
chr17 60828069 60828072 MYB TRANSFAC yes 55209608
chr17 60828076 60828081 ETS2 TRANSFAC yes 21270339
chr17 60828076 60828081 ETS2 TRANSFAC yes 55209609
chr17 60828084 60828095 GCM1 JASPAR yes 21270340
chr17 60828084 60828095 GCM1 JASPAR yes 55209610
chr17 60828089 60828102 EOMES JASPAR yes 21270341
chr17 60828089 60828102 EOMES JASPAR yes 55209611
chr17 60828091 60828102 TBX20 JASPAR yes 21270342
chr17 60828091 60828102 TBX2 JASPAR yes 21270343
chr17 60828091 60828102 TBX20 JASPAR yes 55209612
chr17 60828091 60828102 TBX2 JASPAR yes 55209613
chr17 60828092 60828102 TBX21 JASPAR yes 21270344
chr17 60828092 60828102 TBX21 JASPAR yes 55209614
chr17 60828093 60828101 MGA JASPAR yes 21270345
chr17 60828093 60828101 TBX15 JASPAR yes 21270346
chr17 60828093 60828101 TBX1 JASPAR yes 21270347
chr17 60828093 60828101 TBX4 JASPAR yes 21270348
chr17 60828093 60828101 TBX5 JASPAR yes 21270349
chr17 60828093 60828101 MGA JASPAR yes 55209615
chr17 60828093 60828101 TBX15 JASPAR yes 55209616
chr17 60828093 60828101 TBX1 JASPAR yes 55209617
chr17 60828093 60828101 TBX4 JASPAR yes 55209618
chr17 60828093 60828101 TBX5 JASPAR yes 55209619
chr17 60828093 60828108 AR JASPAR yes 21270350
chr17 60828093 60828108 AR JASPAR yes 55209620
chr17 60828101 60828115 E2F7 JASPAR yes 21270351
chr17 60828101 60828115 E2F7 JASPAR yes 55209621
chr17 60828111 60828127 SOX8 JASPAR yes 21270352
chr17 60828111 60828127 SOX8 JASPAR yes 55209622
chr17 60828128 60828141 ZBTB18 JASPAR yes 21270353
chr17 60828128 60828141 ZBTB18 JASPAR yes 55209623
chr17 60828129 60828141 PKNOX1 JASPAR yes 21270354
chr17 60828129 60828141 PKNOX2 JASPAR yes 21270355
chr17 60828129 60828141 TGIF1 JASPAR yes 21270356
chr17 60828129 60828141 TGIF2 JASPAR yes 21270357
chr17 60828129 60828141 PKNOX1 JASPAR yes 55209624
chr17 60828129 60828141 PKNOX2 JASPAR yes 55209625
chr17 60828129 60828141 TGIF1 JASPAR yes 55209626
chr17 60828129 60828141 TGIF2 JASPAR yes 55209627
chr17 60828130 60828140 NEUROG2 JASPAR yes 21270358
chr17 60828130 60828140 NEUROG2 JASPAR yes 55209628
chr17 60828138 60828156 NR3C1 JASPAR yes 21270359
chr17 60828138 60828156 NR3C1 JASPAR yes 55209629
chr17 60828140 60828145 ETS2 TRANSFAC yes 21270360
chr17 60828140 60828145 ETS2 TRANSFAC yes 55209630
chr17 60828160 60828180 TP53 JASPAR yes 21270361
chr17 60828160 60828180 TP53 JASPAR yes 55209631
chr17 60828173 60828188 TFAP2A JASPAR yes 21270362
chr17 60828173 60828188 TFAP2A JASPAR yes 55209632
chr17 60828201 60828206 SP1 TRANSFAC yes 21270363
chr17 60828201 60828206 SP1 TRANSFAC yes 55209633
SNP sites on vista25444[chr17:60827722-60828206]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 60827768 rs73992049 G A
MZF1 PKNOX2 TFAP2A
4974380
chr17 60827815 rs141147992 G C no 4974381
chr17 60827839 rs2286566 A G
REST
4974382
chr17 60827857 rs552730689 G T no 4974383
chr17 60827885 rs114893890 T G no 4974384
chr17 60827953 rs544216324 A G no 4974385
chr17 60828056 rs138019350 C G,T no 4974386
chr17 60828065 rs114589205 G C no 4974387
chr17 60828102 rs78683070 T C
AR E2F7 EOMES TBX2 TBX20 TBX21
4974388
chr17 60828111 rs4968740 C A,G
E2F7 SOX8
4974389
chr17 60828115 rs548163870 A G
E2F7 SOX8
4974390
chr17 60828184 rs9890485 C T
TFAP2A
4974391
Genes possibly regulated by vista25444[chr17:60827722-60828206]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 60778675 60885705 - MARCH10 ENSG00000173838.7 60885705 0.95 0.94 16131 42501
Expression level of Genes
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miRNAs possibly regulated by vista25444[chr17:60827722-60828206]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results