EnhancerDB
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  3. vista25452[chr17:60938326-60938715]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25452[chr17:60938326-60938715]
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Tissue distribution of vista25452
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Transcription factor that possibly regulate vista25452[chr17:60938326-60938715]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 60938193 60938897 GATA3 UCSC Txn Factor no Conserved 108280861
chr17 60938277 60938637 ZNF217 UCSC Txn Factor no Conserved 108280865
chr17 60938322 60938342 RREB1 JASPAR yes 21270678
chr17 60938322 60938342 RREB1 JASPAR yes 55218380
chr17 60938327 60938337 SP1 JASPAR yes 21270679
chr17 60938327 60938337 SP1 JASPAR yes 55218381
chr17 60938328 60938338 SP1 JASPAR yes 21270680
chr17 60938328 60938338 SP1 JASPAR yes 55218382
chr17 60938330 60938335 SP1 TRANSFAC yes 21270681
chr17 60938330 60938335 SP1 TRANSFAC yes 55218383
chr17 60938336 60938349 NR2F1 JASPAR yes 21270682
chr17 60938336 60938349 NR2F1 JASPAR yes 55218384
chr17 60938339 60938347 NR4A2 JASPAR yes 21270683
chr17 60938339 60938347 NR4A2 JASPAR yes 55218385
chr17 60938340 60938350 RORA JASPAR yes 21270684
chr17 60938340 60938350 RORA JASPAR yes 55218386
chr17 60938389 60938395 ZNF354C JASPAR yes 21270685
chr17 60938389 60938395 ZNF354C JASPAR yes 55218387
chr17 60938394 60938406 GRHL1 JASPAR yes 21270686
chr17 60938394 60938406 GRHL1 JASPAR yes 55218388
chr17 60938416 60938421 GATA2 JASPAR yes 21270687
chr17 60938416 60938421 GATA2 JASPAR yes 55218389
chr17 60938423 60938438 STAT1 JASPAR yes 21270688
chr17 60938423 60938438 STAT1 JASPAR yes 55218390
chr17 60938425 60938436 STAT1 JASPAR yes 21270689
chr17 60938425 60938436 STAT3 JASPAR yes 21270690
chr17 60938425 60938436 STAT1 JASPAR yes 55218391
chr17 60938425 60938436 STAT3 JASPAR yes 55218392
chr17 60938427 60938438 HOXC13 JASPAR yes 21270691
chr17 60938427 60938438 HOXC13 JASPAR yes 55218393
chr17 60938433 60938445 GRHL1 JASPAR yes 21270692
chr17 60938433 60938445 GRHL1 JASPAR yes 55218394
chr17 60938438 60938442 NFE TRANSFAC yes 21270693
chr17 60938438 60938442 NFE TRANSFAC yes 55218395
chr17 60938451 60938465 GATA2 JASPAR yes 21270694
chr17 60938451 60938465 GATA2 JASPAR yes 55218396
chr17 60938453 60938459 GATA1 TRANSFAC yes 21270695
chr17 60938453 60938459 GATA1 TRANSFAC yes 55218397
chr17 60938453 60938461 GATA5 JASPAR yes 21270696
chr17 60938453 60938461 GATA5 JASPAR yes 55218398
chr17 60938513 60938524 GCM1 JASPAR yes 21270697
chr17 60938513 60938524 GCM1 JASPAR yes 55218399
chr17 60938514 60938524 GCM2 JASPAR yes 21270698
chr17 60938514 60938524 GCM2 JASPAR yes 55218400
chr17 60938528 60938543 TFAP2C JASPAR yes 21270699
chr17 60938528 60938543 TFAP2C JASPAR yes 55218401
chr17 60938546 60938551 GATA1 TRANSFAC yes 21270700
chr17 60938546 60938551 GATA1 TRANSFAC yes 55218402
chr17 60938557 60938574 RARA JASPAR yes 21270701
chr17 60938557 60938574 RARA JASPAR yes 55218403
chr17 60938567 60938575 MEIS3 JASPAR yes 21270702
chr17 60938567 60938575 MEIS3 JASPAR yes 55218404
chr17 60938586 60938600 GATA2 JASPAR yes 21270703
chr17 60938586 60938600 GATA2 JASPAR yes 55218405
chr17 60938591 60938594 MYB TRANSFAC yes 21270704
chr17 60938591 60938594 MYB TRANSFAC yes 55218406
chr17 60938604 60938622 MAFF JASPAR yes 21270705
chr17 60938604 60938622 MAFF JASPAR yes 55218407
chr17 60938606 60938617 NRL JASPAR yes 21270706
chr17 60938606 60938617 NRL JASPAR yes 55218408
chr17 60938606 60938621 MAFK JASPAR yes 21270707
chr17 60938606 60938621 MAFK JASPAR yes 55218409
chr17 60938641 60938650 THAP1 JASPAR yes 21270708
chr17 60938641 60938650 THAP1 JASPAR yes 55218410
chr17 60938641 60938656 NR2C2 JASPAR yes 21270709
chr17 60938641 60938656 NR2C2 JASPAR yes 55218411
chr17 60938644 60938648 LFA1 TRANSFAC yes 21270710
chr17 60938644 60938648 LFA1 TRANSFAC yes 55218412
chr17 60938659 60938663 LFA1 TRANSFAC yes 21270711
chr17 60938659 60938663 LFA1 TRANSFAC yes 55218413
chr17 60938674 60938679 GATA2 JASPAR yes 21270712
chr17 60938674 60938679 GATA2 JASPAR yes 55218414
chr17 60938682 60938697 TFAP2C JASPAR yes 21270713
chr17 60938682 60938697 TFAP2C JASPAR yes 55218415
chr17 60938685 60938696 EBF1 JASPAR yes 21270714
chr17 60938685 60938696 EBF1 JASPAR yes 55218416
chr17 60938695 60938714 RFX2 JASPAR yes 21270715
chr17 60938695 60938714 RFX2 JASPAR yes 55218417
chr17 60938699 60938715 RFX2 JASPAR yes 21270716
chr17 60938699 60938715 RFX3 JASPAR yes 21270717
chr17 60938699 60938715 RFX4 JASPAR yes 21270718
chr17 60938699 60938715 RFX5 JASPAR yes 21270719
chr17 60938699 60938715 RFX2 JASPAR yes 55218418
chr17 60938699 60938715 RFX3 JASPAR yes 55218419
chr17 60938699 60938715 RFX4 JASPAR yes 55218420
chr17 60938699 60938715 RFX5 JASPAR yes 55218421
chr17 60938700 60938719 RFX2 JASPAR yes 21270720
chr17 60938700 60938719 RFX2 JASPAR yes 55218422
chr17 60938713 60938724 E2F6 JASPAR yes 21270721
chr17 60938713 60938724 E2F6 JASPAR yes 55218423
SNP sites on vista25452[chr17:60938326-60938715]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 60938345 rs150592142 C A
GATA3 NR2F1 NR4A2 RORA ZNF217
4975252
chr17 60938670 rs548735939 T A
GATA3
4975253
Genes possibly regulated by vista25452[chr17:60938326-60938715]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 60778675 60885705 - MARCH10 ENSG00000173838.7 60885705 0.95 0.94 16131 47379
Expression level of Genes
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miRNAs possibly regulated by vista25452[chr17:60938326-60938715]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results