EnhancerDB
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  3. vista2548[chr1:94991460-94991992]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2548[chr1:94991460-94991992]
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Tissue distribution of vista2548
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Transcription factor that possibly regulate vista2548[chr1:94991460-94991992]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 94991469 94991479 POU6F2 JASPAR yes 30885596
chr1 94991469 94991479 POU6F2 JASPAR yes 118332815
chr1 94991470 94991480 EMX1 JASPAR yes 30885597
chr1 94991470 94991480 EMX2 JASPAR yes 30885598
chr1 94991470 94991480 ESX1 JASPAR yes 30885599
chr1 94991470 94991480 EVX1 JASPAR yes 30885600
chr1 94991470 94991480 EVX2 JASPAR yes 30885601
chr1 94991470 94991480 GBX1 JASPAR yes 30885602
chr1 94991470 94991480 GBX2 JASPAR yes 30885603
chr1 94991470 94991480 HESX1 JASPAR yes 30885604
chr1 94991470 94991480 HOXA2 JASPAR yes 30885605
chr1 94991470 94991480 HOXB2 JASPAR yes 30885606
chr1 94991470 94991480 LBX2 JASPAR yes 30885607
chr1 94991470 94991480 LHX2 JASPAR yes 30885608
chr1 94991470 94991480 LHX6 JASPAR yes 30885609
chr1 94991470 94991480 MEOX1 JASPAR yes 30885610
chr1 94991470 94991480 MEOX2 JASPAR yes 30885611
chr1 94991470 94991480 NOTO JASPAR yes 30885612
chr1 94991470 94991480 POU6F1 JASPAR yes 30885613
chr1 94991470 94991480 RAX JASPAR yes 30885614
chr1 94991470 94991480 EMX1 JASPAR yes 118332816
chr1 94991470 94991480 EMX2 JASPAR yes 118332817
chr1 94991470 94991480 ESX1 JASPAR yes 118332818
chr1 94991470 94991480 EVX1 JASPAR yes 118332819
chr1 94991470 94991480 EVX2 JASPAR yes 118332820
chr1 94991470 94991480 GBX1 JASPAR yes 118332821
chr1 94991470 94991480 GBX2 JASPAR yes 118332822
chr1 94991470 94991480 HESX1 JASPAR yes 118332823
chr1 94991470 94991480 HOXA2 JASPAR yes 118332824
chr1 94991470 94991480 HOXB2 JASPAR yes 118332825
chr1 94991470 94991480 LBX2 JASPAR yes 118332826
chr1 94991470 94991480 LHX2 JASPAR yes 118332827
chr1 94991470 94991480 LHX6 JASPAR yes 118332828
chr1 94991470 94991480 MEOX1 JASPAR yes 118332829
chr1 94991470 94991480 MEOX2 JASPAR yes 118332830
chr1 94991470 94991480 NOTO JASPAR yes 118332831
chr1 94991470 94991480 POU6F1 JASPAR yes 118332832
chr1 94991470 94991480 RAX JASPAR yes 118332833
chr1 94991471 94991479 LBX1 JASPAR yes 30885615
chr1 94991471 94991479 PDX1 JASPAR yes 30885616
chr1 94991471 94991479 VAX1 JASPAR yes 30885617
chr1 94991471 94991479 VAX2 JASPAR yes 30885618
chr1 94991471 94991479 VSX1 JASPAR yes 30885619
chr1 94991471 94991479 VSX2 JASPAR yes 30885620
chr1 94991471 94991479 LBX1 JASPAR yes 118332834
chr1 94991471 94991479 PDX1 JASPAR yes 118332835
chr1 94991471 94991479 VAX1 JASPAR yes 118332836
chr1 94991471 94991479 VAX2 JASPAR yes 118332837
chr1 94991471 94991479 VSX1 JASPAR yes 118332838
chr1 94991471 94991479 VSX2 JASPAR yes 118332839
chr1 94991472 94991483 PROP1 JASPAR yes 30885621
chr1 94991472 94991483 PROP1 JASPAR yes 118332840
chr1 94991492 94991505 DUXA JASPAR yes 30885622
chr1 94991492 94991505 DUXA JASPAR yes 118332841
chr1 94991496 94991505 PITX3 JASPAR yes 30885623
chr1 94991496 94991505 PITX3 JASPAR yes 118332842
chr1 94991497 94991505 RHOXF1 JASPAR yes 30885624
chr1 94991497 94991505 RHOXF1 JASPAR yes 118332843
chr1 94991498 94991509 PHOX2A JASPAR yes 30885625
chr1 94991498 94991509 PHOX2A JASPAR yes 118332844
chr1 94991502 94991506 H1TF2 TRANSFAC yes 30885626
chr1 94991502 94991506 NFE TRANSFAC yes 30885627
chr1 94991502 94991506 SRF TRANSFAC yes 30885628
chr1 94991502 94991506 H1TF2 TRANSFAC yes 118332845
chr1 94991502 94991506 NFE TRANSFAC yes 118332846
chr1 94991502 94991506 SRF TRANSFAC yes 118332847
chr1 94991506 94991510 YY1 TRANSFAC yes 30885629
chr1 94991506 94991510 YY1 TRANSFAC yes 118332848
chr1 94991523 94991535 YY1 JASPAR yes 30885630
chr1 94991523 94991535 YY1 JASPAR yes 118332849
chr1 94991530 94991544 PLAG1 JASPAR yes 30885631
chr1 94991530 94991544 PLAG1 JASPAR yes 118332850
chr1 94991538 94991559 ZNF263 JASPAR yes 30885632
chr1 94991538 94991559 ZNF263 JASPAR yes 118332851
chr1 94991540 94991555 STAT2 JASPAR yes 30885633
chr1 94991540 94991555 STAT2 JASPAR yes 118332852
chr1 94991546 94991553 SPI1 JASPAR yes 30885634
chr1 94991546 94991553 SPI1 JASPAR yes 118332853
chr1 94991562 94991575 ZBTB18 JASPAR yes 30885635
chr1 94991562 94991575 ZBTB18 JASPAR yes 118332854
chr1 94991581 94991595 TCF7L2 JASPAR yes 30885636
chr1 94991581 94991595 TCF7L2 JASPAR yes 118332855
chr1 94991581 94991596 LEF1 JASPAR yes 30885637
chr1 94991581 94991596 LEF1 JASPAR yes 118332856
chr1 94991582 94991590 RHOXF1 JASPAR yes 30885638
chr1 94991582 94991590 RHOXF1 JASPAR yes 118332857
chr1 94991585 94991593 LEF1 TRANSFAC yes 30885639
chr1 94991585 94991593 LEF1 TRANSFAC yes 118332858
chr1 94991589 94991594 ETS2 TRANSFAC yes 30885640
chr1 94991589 94991594 ETS2 TRANSFAC yes 118332859
chr1 94991592 94991604 GRHL1 JASPAR yes 30885641
chr1 94991592 94991604 GRHL1 JASPAR yes 118332860
chr1 94991601 94991611 HOXA13 JASPAR yes 30885642
chr1 94991601 94991611 HOXB13 JASPAR yes 30885643
chr1 94991601 94991611 HOXD13 JASPAR yes 30885644
chr1 94991601 94991611 HOXA13 JASPAR yes 118332861
chr1 94991601 94991611 HOXB13 JASPAR yes 118332862
chr1 94991601 94991611 HOXD13 JASPAR yes 118332863
chr1 94991601 94991612 HOXC13 JASPAR yes 30885645
chr1 94991601 94991612 HOXC13 JASPAR yes 118332864
chr1 94991605 94991609 TEAD2 TRANSFAC yes 30885646
chr1 94991605 94991609 TEAD2 TRANSFAC yes 118332865
chr1 94991622 94991633 SPDEF JASPAR yes 30885647
chr1 94991622 94991633 SPDEF JASPAR yes 118332866
chr1 94991624 94991631 PEA3 TRANSFAC yes 30885648
chr1 94991624 94991631 PEA3 TRANSFAC yes 118332867
chr1 94991626 94991638 FOXI1 JASPAR yes 30885649
chr1 94991626 94991638 FOXI1 JASPAR yes 118332868
chr1 94991627 94991639 FOXC2 JASPAR yes 30885650
chr1 94991627 94991639 FOXC2 JASPAR yes 118332869
chr1 94991627 94991641 FOXF2 JASPAR yes 30885651
chr1 94991627 94991641 FOXF2 JASPAR yes 118332870
chr1 94991628 94991636 FOXG1 JASPAR yes 30885652
chr1 94991628 94991636 FOXG1 JASPAR yes 118332871
chr1 94991628 94991639 FOXC1 JASPAR yes 30885653
chr1 94991628 94991639 FOXC1 JASPAR yes 118332872
chr1 94991630 94991638 GATA3 JASPAR yes 30885654
chr1 94991630 94991638 GATA3 JASPAR yes 118332873
chr1 94991639 94991650 STAT1 JASPAR yes 30885655
chr1 94991639 94991650 STAT3 JASPAR yes 30885656
chr1 94991639 94991650 STAT1 JASPAR yes 118332874
chr1 94991639 94991650 STAT3 JASPAR yes 118332875
chr1 94991687 94991705 RARA JASPAR yes 30885657
chr1 94991687 94991705 RARA JASPAR yes 118332876
chr1 94991691 94991696 GATA2 JASPAR yes 30885658
chr1 94991691 94991696 GATA2 JASPAR yes 118332877
chr1 94991697 94991709 INSM1 JASPAR yes 30885659
chr1 94991697 94991709 INSM1 JASPAR yes 118332878
chr1 94991703 94991713 SP1 JASPAR yes 30885660
chr1 94991703 94991713 SP1 JASPAR yes 118332879
chr1 94991704 94991708 LFA1 TRANSFAC yes 30885661
chr1 94991704 94991708 LFA1 TRANSFAC yes 118332880
chr1 94991705 94991716 NFE2L2 JASPAR yes 30885662
chr1 94991705 94991716 NFE2L2 JASPAR yes 118332881
chr1 94991711 94991719 NKX6-1 JASPAR yes 30885663
chr1 94991711 94991719 NKX6-1 JASPAR yes 118332882
chr1 94991711 94991721 HOXC10 JASPAR yes 30885664
chr1 94991711 94991721 HOXC10 JASPAR yes 118332883
chr1 94991713 94991717 YY1 TRANSFAC yes 30885665
chr1 94991713 94991717 YY1 TRANSFAC yes 118332884
chr1 94991716 94991723 NKX3-1 JASPAR yes 30885666
chr1 94991716 94991723 NKX3-1 JASPAR yes 118332885
chr1 94991722 94991727 MYB TRANSFAC yes 30885667
chr1 94991722 94991727 MYB TRANSFAC yes 118332886
chr1 94991731 94991744 POU2F2 JASPAR yes 30885668
chr1 94991731 94991744 POU2F2 JASPAR yes 118332887
chr1 94991733 94991747 IRF7 JASPAR yes 30885669
chr1 94991733 94991747 IRF8 JASPAR yes 30885670
chr1 94991733 94991747 IRF7 JASPAR yes 118332888
chr1 94991733 94991747 IRF8 JASPAR yes 118332889
chr1 94991734 94991752 IRF2 JASPAR yes 30885671
chr1 94991734 94991752 IRF2 JASPAR yes 118332890
chr1 94991748 94991752 YY1 TRANSFAC yes 30885672
chr1 94991748 94991752 YY1 TRANSFAC yes 118332891
chr1 94991758 94991762 TEAD2 TRANSFAC yes 30885673
chr1 94991758 94991762 TEAD2 TRANSFAC yes 118332892
chr1 94991766 94991776 TEAD4 JASPAR yes 30885674
chr1 94991766 94991776 TEAD4 JASPAR yes 118332893
chr1 94991766 94991778 TEAD1 JASPAR yes 30885675
chr1 94991766 94991778 TEAD1 JASPAR yes 118332894
chr1 94991785 94991791 SOX10 JASPAR yes 30885676
chr1 94991785 94991791 SOX10 JASPAR yes 118332895
chr1 94991786 94991801 FOXA1 JASPAR yes 30885677
chr1 94991786 94991801 FOXA1 JASPAR yes 118332896
chr1 94991787 94991799 FOXI1 JASPAR yes 30885678
chr1 94991787 94991799 FOXI1 JASPAR yes 118332897
chr1 94991787 94991802 FOXP1 JASPAR yes 30885679
chr1 94991787 94991802 FOXP1 JASPAR yes 118332898
chr1 94991788 94991799 FOXP2 JASPAR yes 30885680
chr1 94991788 94991799 FOXP2 JASPAR yes 118332899
chr1 94991788 94991800 FOXC2 JASPAR yes 30885681
chr1 94991788 94991800 FOXC2 JASPAR yes 118332900
chr1 94991789 94991797 FOXG1 JASPAR yes 30885682
chr1 94991789 94991797 FOXG1 JASPAR yes 118332901
chr1 94991789 94991800 FOXB1 JASPAR yes 30885683
chr1 94991789 94991800 FOXC1 JASPAR yes 30885684
chr1 94991789 94991800 FOXB1 JASPAR yes 118332902
chr1 94991789 94991800 FOXC1 JASPAR yes 118332903
chr1 94991790 94991801 FOXA1 JASPAR yes 30885685
chr1 94991790 94991801 FOXA1 JASPAR yes 118332904
chr1 94991796 94991800 YY1 TRANSFAC yes 30885686
chr1 94991796 94991800 YY1 TRANSFAC yes 118332905
chr1 94991804 94991808 ESR1 TRANSFAC yes 30885687
chr1 94991804 94991808 ESR1 TRANSFAC yes 118332906
chr1 94991805 94991816 NRL JASPAR yes 30885688
chr1 94991805 94991816 NRL JASPAR yes 118332907
chr1 94991811 94991823 HLF JASPAR yes 30885689
chr1 94991811 94991823 HLF JASPAR yes 118332908
chr1 94991844 94991849 ETS2 TRANSFAC yes 30885690
chr1 94991844 94991849 ETS2 TRANSFAC yes 118332909
chr1 94991852 94991873 MAFG JASPAR yes 30885691
chr1 94991852 94991873 MAFG JASPAR yes 118332910
chr1 94991853 94991867 JUN JASPAR yes 30885692
chr1 94991853 94991867 JUN JASPAR yes 118332911
chr1 94991857 94991868 FOS JASPAR yes 30885693
chr1 94991857 94991868 FOSL1 JASPAR yes 30885694
chr1 94991857 94991868 JUND JASPAR yes 30885695
chr1 94991857 94991868 FOS JASPAR yes 118332912
chr1 94991857 94991868 FOSL1 JASPAR yes 118332913
chr1 94991857 94991868 JUND JASPAR yes 118332914
chr1 94991858 94991869 JUNB JASPAR yes 30885696
chr1 94991858 94991869 NFE2L2 JASPAR yes 30885697
chr1 94991858 94991869 JUNB JASPAR yes 118332915
chr1 94991858 94991869 NFE2L2 JASPAR yes 118332916
chr1 94991858 94991872 JUN JASPAR yes 30885698
chr1 94991858 94991872 JUN JASPAR yes 118332917
chr1 94991859 94991870 BATF JASPAR yes 30885699
chr1 94991859 94991870 BATF JASPAR yes 118332918
chr1 94991872 94991881 SRY JASPAR yes 30885700
chr1 94991872 94991881 SRY JASPAR yes 118332919
chr1 94991873 94991883 PAX3 JASPAR yes 30885701
chr1 94991873 94991883 PAX7 JASPAR yes 30885702
chr1 94991873 94991883 PAX3 JASPAR yes 118332920
chr1 94991873 94991883 PAX7 JASPAR yes 118332921
chr1 94991875 94991884 VENTX JASPAR yes 30885703
chr1 94991875 94991884 VENTX JASPAR yes 118332922
chr1 94991876 94991884 BARX1 JASPAR yes 30885704
chr1 94991876 94991884 BARX1 JASPAR yes 118332923
chr1 94991878 94991889 JUND JASPAR yes 30885705
chr1 94991878 94991889 JUND JASPAR yes 118332924
chr1 94991896 94991911 HNF4A JASPAR yes 30885706
chr1 94991896 94991911 HNF4A JASPAR yes 118332925
chr1 94991899 94991910 NFKB1 JASPAR yes 30885707
chr1 94991899 94991910 NFKB1 JASPAR yes 118332926
chr1 94991947 94991961 BATF3 JASPAR yes 30885708
chr1 94991947 94991961 BATF3 JASPAR yes 118332927
chr1 94991951 94991959 MEIS2 JASPAR yes 30885709
chr1 94991951 94991959 MEIS3 JASPAR yes 30885710
chr1 94991951 94991959 MEIS2 JASPAR yes 118332928
chr1 94991951 94991959 MEIS3 JASPAR yes 118332929
chr1 94991952 94991956 NFE TRANSFAC yes 30885711
chr1 94991952 94991956 NFE TRANSFAC yes 118332930
chr1 94991965 94991986 IRF1 JASPAR yes 30885712
chr1 94991965 94991986 IRF1 JASPAR yes 118332931
chr1 94991967 94991982 STAT2 JASPAR yes 30885713
chr1 94991967 94991982 STAT2 JASPAR yes 118332932
chr1 94991968 94991982 SPI1 JASPAR yes 30885714
chr1 94991968 94991982 SPI1 JASPAR yes 118332933
chr1 94991969 94991990 IRF1 JASPAR yes 30885715
chr1 94991969 94991990 IRF1 JASPAR yes 118332934
chr1 94991971 94991986 FOXP1 JASPAR yes 30885716
chr1 94991971 94991986 FOXP1 JASPAR yes 118332935
chr1 94991971 94991992 IRF1 JASPAR yes 30885717
chr1 94991971 94991992 IRF1 JASPAR yes 118332936
chr1 94991976 94991991 FOXP1 JASPAR yes 30885718
chr1 94991976 94991991 FOXP1 JASPAR yes 118332937
chr1 94991988 94992007 PAX5 JASPAR yes 30885719
chr1 94991988 94992007 PAX5 JASPAR yes 118332938
SNP sites on vista2548[chr1:94991460-94991992]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 94991664 rs375934942 G A no 495433
chr1 94991687 rs35528105 TGA T
RARA
495434
chr1 94991687 rs372782963 TGA T
RARA
495435
chr1 94991971 rs200783004 CTTCTTTT C
FOXP1 IRF1 SPI1 STAT2
495436
Genes possibly regulated by vista2548[chr1:94991460-94991992]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 94994781 95007356 - F3 ENSG00000117525.9 95007356 0.97 1.0 913 84636
Expression level of Genes
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miRNAs possibly regulated by vista2548[chr1:94991460-94991992]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results