EnhancerDB
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  3. vista25481[chr17:61538235-61538385]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25481[chr17:61538235-61538385]
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Tissue distribution of vista25481
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Transcription factor that possibly regulate vista25481[chr17:61538235-61538385]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 61538143 61538543 FOS UCSC Txn Factor no Conserved 108281437
chr17 61538145 61538465 JUND UCSC Txn Factor no Conserved 108281438
chr17 61538173 61538429 CEBPB UCSC Txn Factor no Conserved 108281449
chr17 61538206 61538449 JUNB UCSC Txn Factor no Conserved 108281460
chr17 61538209 61538422 FOSL2 UCSC Txn Factor no Conserved 108281462
chr17 61538256 61538421 FOSL1 UCSC Txn Factor no Conserved 108281473
chr17 61538262 61538421 TEAD4 UCSC Txn Factor no Conserved 108281476
chr17 61538227 61538239 TEAD1 JASPAR yes 21272362
chr17 61538227 61538239 TEAD1 JASPAR yes 55253902
chr17 61538231 61538242 BATF JASPAR yes 21272363
chr17 61538231 61538242 BATF JASPAR yes 55253904
chr17 61538252 61538257 ETS2 TRANSFAC yes 21272364
chr17 61538252 61538257 ETS2 TRANSFAC yes 55253905
chr17 61538259 61538275 POU4F2 JASPAR yes 21272365
chr17 61538259 61538275 POU4F3 JASPAR yes 21272366
chr17 61538259 61538275 POU4F2 JASPAR yes 55253906
chr17 61538259 61538275 POU4F3 JASPAR yes 55253907
chr17 61538262 61538266 YY1 TRANSFAC yes 21272367
chr17 61538262 61538266 YY1 TRANSFAC yes 55253908
chr17 61538262 61538276 POU4F1 JASPAR yes 21272368
chr17 61538262 61538276 POU4F1 JASPAR yes 55253909
chr17 61538266 61538276 ALX3 JASPAR yes 21272369
chr17 61538266 61538276 GSX1 JASPAR yes 21272370
chr17 61538266 61538276 GSX2 JASPAR yes 21272371
chr17 61538266 61538276 MIXL1 JASPAR yes 21272372
chr17 61538266 61538276 MNX1 JASPAR yes 21272373
chr17 61538266 61538276 NOTO JASPAR yes 21272374
chr17 61538266 61538276 ALX3 JASPAR yes 55253910
chr17 61538266 61538276 GSX1 JASPAR yes 55253911
chr17 61538266 61538276 GSX2 JASPAR yes 55253912
chr17 61538266 61538276 MIXL1 JASPAR yes 55253913
chr17 61538266 61538276 MNX1 JASPAR yes 55253914
chr17 61538266 61538276 NOTO JASPAR yes 55253915
chr17 61538267 61538275 ISX JASPAR yes 21272375
chr17 61538267 61538275 LMX1A JASPAR yes 21272376
chr17 61538267 61538275 LMX1B JASPAR yes 21272377
chr17 61538267 61538275 NKX6-1 JASPAR yes 21272378
chr17 61538267 61538275 NKX6-2 JASPAR yes 21272379
chr17 61538267 61538275 PRRX1 JASPAR yes 21272380
chr17 61538267 61538275 RAX2 JASPAR yes 21272381
chr17 61538267 61538275 SHOX JASPAR yes 21272382
chr17 61538267 61538275 UNCX JASPAR yes 21272383
chr17 61538267 61538275 VAX1 JASPAR yes 21272384
chr17 61538267 61538275 ISX JASPAR yes 55253916
chr17 61538267 61538275 LMX1A JASPAR yes 55253917
chr17 61538267 61538275 LMX1B JASPAR yes 55253918
chr17 61538267 61538275 NKX6-1 JASPAR yes 55253919
chr17 61538267 61538275 NKX6-2 JASPAR yes 55253920
chr17 61538267 61538275 PRRX1 JASPAR yes 55253921
chr17 61538267 61538275 RAX2 JASPAR yes 55253922
chr17 61538267 61538275 SHOX JASPAR yes 55253923
chr17 61538267 61538275 UNCX JASPAR yes 55253924
chr17 61538267 61538275 VAX1 JASPAR yes 55253925
chr17 61538285 61538296 CEBPA JASPAR yes 21272385
chr17 61538285 61538296 CEBPA JASPAR yes 55253926
chr17 61538285 61538297 HLF JASPAR yes 21272386
chr17 61538285 61538297 HLF JASPAR yes 55253927
chr17 61538286 61538297 CEBPB JASPAR yes 21272387
chr17 61538286 61538297 CEBPB JASPAR yes 55253928
chr17 61538307 61538321 JUN JASPAR yes 21272388
chr17 61538307 61538321 JUN JASPAR yes 55253929
chr17 61538309 61538320 BATF JASPAR yes 21272389
chr17 61538309 61538320 BATF JASPAR yes 55253930
chr17 61538311 61538322 FOS JASPAR yes 21272390
chr17 61538311 61538322 FOSL1 JASPAR yes 21272391
chr17 61538311 61538322 FOS JASPAR yes 55253931
chr17 61538311 61538322 FOSL1 JASPAR yes 55253932
chr17 61538312 61538321 JDP2 JASPAR yes 21272392
chr17 61538312 61538321 JDP2 JASPAR yes 55253933
chr17 61538340 61538353 TFAP2B JASPAR yes 21272393
chr17 61538340 61538353 TFAP2B JASPAR yes 55253934
chr17 61538354 61538360 GATA3 JASPAR yes 21272394
chr17 61538354 61538360 GATA3 JASPAR yes 55253935
chr17 61538367 61538371 NFE TRANSFAC yes 21272395
chr17 61538367 61538371 NFE TRANSFAC yes 55253936
SNP sites on vista25481[chr17:61538235-61538385]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 61538269 rs190843463 T A
ALX3 CEBPB FOS FOSL1 FOSL2 GSX1 GSX2 ISX JUNB JUND LMX1A LMX1B MIXL1 MNX1 NKX6-1 NKX6-2 NOTO POU4F1 POU4F2 POU4F3 PRRX1 RAX2 SHOX TEAD4 UNCX VAX1
4978163
chr17 61538358 rs559641550 T C
CEBPB FOS FOSL1 FOSL2 GATA3 JUNB JUND TEAD4
4978164
chr17 61538381 rs115611066 C T
CEBPB FOS FOSL1 FOSL2 JUNB JUND TEAD4
4978165
Genes possibly regulated by vista25481[chr17:61538235-61538385]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 61509665 61523739 - CYB561 ENSG00000008283.11 61523739 0.86 1.0 16133 85504
chr17 61554422 61599205 + ACE ENSG00000159640.10 61554422 0.95 1.0 16134 83963
chr17 61562184 61599209 + ACE ENSG00000264813.1 61562184 0.0 0.0 16135 76201
chr17 61600695 61626338 + KCNH6 ENSG00000173826.10 61600695 0.97 1.0 16136 37690
chr17 61627822 61671639 + DCAF7 ENSG00000136485.10 61627822 0.75 1.0 16137 10563
Expression level of Genes
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miRNAs possibly regulated by vista25481[chr17:61538235-61538385]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results