EnhancerDB
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  3. vista25493[chr17:62066027-62066333]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25493[chr17:62066027-62066333]
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Tissue distribution of vista25493
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Transcription factor that possibly regulate vista25493[chr17:62066027-62066333]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 62066023 62066033 MZF1 JASPAR yes 21272765
chr17 62066023 62066033 MZF1 JASPAR yes 55269476
chr17 62066023 62066035 E2F8 JASPAR yes 21272766
chr17 62066023 62066035 E2F8 JASPAR yes 55269477
chr17 62066025 62066040 TFAP2A JASPAR yes 21272767
chr17 62066025 62066040 TFAP2A JASPAR yes 55269478
chr17 62066054 62066060 MZF1 JASPAR yes 21272768
chr17 62066054 62066060 MZF1 JASPAR yes 55269479
chr17 62066057 62066075 RARA JASPAR yes 21272769
chr17 62066057 62066075 RARA JASPAR yes 55269480
chr17 62066061 62066071 MZF1 JASPAR yes 21272770
chr17 62066061 62066071 MZF1 JASPAR yes 55269481
chr17 62066072 62066083 STAT1 JASPAR yes 21272771
chr17 62066072 62066083 STAT3 JASPAR yes 21272772
chr17 62066072 62066083 STAT1 JASPAR yes 55269482
chr17 62066072 62066083 STAT3 JASPAR yes 55269483
chr17 62066074 62066087 TFAP2A JASPAR yes 21272773
chr17 62066074 62066087 TFAP2B JASPAR yes 21272774
chr17 62066074 62066087 TFAP2C JASPAR yes 21272775
chr17 62066074 62066087 TFAP2A JASPAR yes 55269484
chr17 62066074 62066087 TFAP2B JASPAR yes 55269485
chr17 62066074 62066087 TFAP2C JASPAR yes 55269486
chr17 62066101 62066112 STAT1 JASPAR yes 21272776
chr17 62066101 62066112 STAT1 JASPAR yes 55269487
chr17 62066112 62066129 PAX9 JASPAR yes 21272777
chr17 62066112 62066129 PAX9 JASPAR yes 55269488
chr17 62066121 62066141 RREB1 JASPAR yes 21272778
chr17 62066121 62066141 RREB1 JASPAR yes 55269489
chr17 62066129 62066134 SP1 TRANSFAC yes 21272779
chr17 62066129 62066134 SP1 TRANSFAC yes 55269490
chr17 62066130 62066140 SP1 JASPAR yes 21272780
chr17 62066130 62066140 SP1 JASPAR yes 55269491
chr17 62066132 62066144 INSM1 JASPAR yes 21272781
chr17 62066132 62066144 INSM1 JASPAR yes 55269492
chr17 62066137 62066146 SP1 TRANSFAC yes 21272782
chr17 62066137 62066146 SP1 TRANSFAC yes 55269493
chr17 62066137 62066147 SP1 JASPAR yes 21272783
chr17 62066137 62066147 SP1 JASPAR yes 55269494
chr17 62066139 62066145 MAZ TRANSFAC yes 21272784
chr17 62066139 62066145 MAZ TRANSFAC yes 55269495
chr17 62066143 62066153 SP1 JASPAR yes 21272785
chr17 62066143 62066153 SP1 JASPAR yes 55269496
chr17 62066144 62066148 LFA1 TRANSFAC yes 21272786
chr17 62066144 62066148 LFA1 TRANSFAC yes 55269497
chr17 62066149 62066163 MTF1 JASPAR yes 21272787
chr17 62066149 62066163 MTF1 JASPAR yes 55269498
chr17 62066156 62066160 LFA1 TRANSFAC yes 21272788
chr17 62066156 62066160 LFA1 TRANSFAC yes 55269499
chr17 62066170 62066189 CTCF JASPAR yes 21272789
chr17 62066170 62066189 CTCF JASPAR yes 55269500
chr17 62066187 62066200 HSF1 JASPAR yes 21272790
chr17 62066187 62066200 HSF4 JASPAR yes 21272791
chr17 62066187 62066200 HSF1 JASPAR yes 55269501
chr17 62066187 62066200 HSF4 JASPAR yes 55269502
chr17 62066193 62066207 STAT1 JASPAR yes 21272792
chr17 62066193 62066207 STAT1 JASPAR yes 55269503
chr17 62066229 62066250 ZNF263 JASPAR yes 21272793
chr17 62066229 62066250 ZNF263 JASPAR yes 55269504
chr17 62066230 62066240 ZNF740 JASPAR yes 21272794
chr17 62066230 62066240 ZNF740 JASPAR yes 55269505
chr17 62066230 62066244 GLIS2 JASPAR yes 21272795
chr17 62066230 62066244 GLIS3 JASPAR yes 21272796
chr17 62066230 62066244 GLIS2 JASPAR yes 55269506
chr17 62066230 62066244 GLIS3 JASPAR yes 55269507
chr17 62066243 62066258 ZIC3 JASPAR yes 21272797
chr17 62066243 62066258 ZIC3 JASPAR yes 55269508
chr17 62066257 62066267 SP1 JASPAR yes 21272798
chr17 62066257 62066267 SP1 JASPAR yes 55269509
chr17 62066260 62066270 ZNF740 JASPAR yes 21272799
chr17 62066260 62066270 ZNF740 JASPAR yes 55269510
chr17 62066260 62066281 ZNF263 JASPAR yes 21272800
chr17 62066260 62066281 ZNF263 JASPAR yes 55269511
chr17 62066285 62066296 FOXA1 JASPAR yes 21272801
chr17 62066285 62066296 FOXA1 JASPAR yes 55269512
chr17 62066300 62066316 SOX4 JASPAR yes 21272802
chr17 62066300 62066316 SOX4 JASPAR yes 55269513
chr17 62066301 62066316 SOX21 JASPAR yes 21272803
chr17 62066301 62066316 SOX21 JASPAR yes 55269514
chr17 62066301 62066317 SOX4 JASPAR yes 21272804
chr17 62066301 62066317 SOX4 JASPAR yes 55269515
chr17 62066313 62066332 PAX5 JASPAR yes 21272805
chr17 62066313 62066332 PAX5 JASPAR yes 55269516
SNP sites on vista25493[chr17:62066027-62066333]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 62066053 rs35687311 C A,T no 4980928
chr17 62066091 rs140939855 C A,T no 4980929
chr17 62066128 rs530843108 CGGGTGGGCT C
PAX9 RREB1
4980930
chr17 62066135 rs577300401 G C
INSM1 RREB1 SP1
4980931
chr17 62066162 rs562951312 A G
MTF1
4980932
chr17 62066227 rs150453103 CCAG C no 4980933
chr17 62066242 rs564544057 C G
GLIS2 GLIS3 ZNF263
4980934
chr17 62066243 rs542376111 C T
GLIS2 GLIS3 ZIC3 ZNF263
4980935
Genes possibly regulated by vista25493[chr17:62066027-62066333]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 61972275 61974021 - CSH1 ENSG00000136488.10 61974021 1.0 0.96 16150 7994
chr17 61986957 61996198 - CSHL1 ENSG00000204414.7 61996198 1.0 1.0 16151 30171
chr17 61994560 61996179 - GH1 ENSG00000259384.2 61996179 0.81 1.0 16152 30152
chr17 62006100 62009714 - CD79B ENSG00000007312.8 62009714 0.98 0.92 16153 43687
chr17 62015914 62050278 - SCN4A ENSG00000007314.7 62050278 0.96 1.0 16154 84251
chr17 62075711 62081664 + C17orf72 ENSG00000224383.3 62075711 0.87 0.98 16155 90622
chr17 62079954 62097994 - ICAM2 ENSG00000108622.6 62097994 0.8 0.95 16156 68339
Expression level of Genes
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miRNAs possibly regulated by vista25493[chr17:62066027-62066333]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results