EnhancerDB
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  3. vista25500[chr17:62138721-62138967]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25500[chr17:62138721-62138967]
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Tissue distribution of vista25500
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Transcription factor that possibly regulate vista25500[chr17:62138721-62138967]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 62138501 62138735 SPI1 UCSC Txn Factor no Conserved 108282069
chr17 62138719 62138740 IRF1 JASPAR yes 21273012
chr17 62138719 62138740 IRF1 JASPAR yes 55273433
chr17 62138720 62138730 RELA JASPAR yes 21273013
chr17 62138720 62138730 RELA JASPAR yes 55273434
chr17 62138721 62138736 PRDM1 JASPAR yes 21273014
chr17 62138721 62138736 STAT2 JASPAR yes 21273015
chr17 62138721 62138736 PRDM1 JASPAR yes 55273435
chr17 62138721 62138736 STAT2 JASPAR yes 55273436
chr17 62138722 62138736 STAT1 JASPAR yes 21273016
chr17 62138722 62138736 STAT1 JASPAR yes 55273437
chr17 62138726 62138731 ETS2 TRANSFAC yes 21273017
chr17 62138726 62138731 ETS2 TRANSFAC yes 55273438
chr17 62138726 62138741 AR JASPAR yes 21273018
chr17 62138726 62138741 STAT2 JASPAR yes 21273019
chr17 62138726 62138741 AR JASPAR yes 55273439
chr17 62138726 62138741 STAT2 JASPAR yes 55273440
chr17 62138761 62138772 FOS JASPAR yes 21273020
chr17 62138761 62138772 FOSL1 JASPAR yes 21273021
chr17 62138761 62138772 JUND JASPAR yes 21273022
chr17 62138761 62138772 FOS JASPAR yes 55273441
chr17 62138761 62138772 FOSL1 JASPAR yes 55273442
chr17 62138761 62138772 JUND JASPAR yes 55273443
chr17 62138762 62138773 FOSL2 JASPAR yes 21273023
chr17 62138762 62138773 JUNB JASPAR yes 21273024
chr17 62138762 62138773 FOSL2 JASPAR yes 55273444
chr17 62138762 62138773 JUNB JASPAR yes 55273445
chr17 62138762 62138776 JUN JASPAR yes 21273025
chr17 62138762 62138776 JUN JASPAR yes 55273446
chr17 62138767 62138784 RXRA JASPAR yes 21273026
chr17 62138767 62138784 RXRA JASPAR yes 55273447
chr17 62138772 62138787 PRDM1 JASPAR yes 21273027
chr17 62138772 62138787 PRDM1 JASPAR yes 55273448
chr17 62138775 62138793 RARA JASPAR yes 21273028
chr17 62138775 62138793 RARA JASPAR yes 55273449
chr17 62138789 62138799 NFATC3 JASPAR yes 21273029
chr17 62138789 62138799 NFATC3 JASPAR yes 55273450
chr17 62138794 62138803 SOX9 JASPAR yes 21273030
chr17 62138794 62138803 SOX9 JASPAR yes 55273451
chr17 62138811 62138815 NFE TRANSFAC yes 21273031
chr17 62138811 62138815 NFE TRANSFAC yes 55273452
chr17 62138819 62138824 H4TF1 TRANSFAC yes 21273032
chr17 62138819 62138824 H4TF1 TRANSFAC yes 55273453
chr17 62138833 62138842 NFIX JASPAR yes 21273033
chr17 62138833 62138842 NFIX JASPAR yes 55273454
chr17 62138833 62138843 NFIA JASPAR yes 21273034
chr17 62138833 62138843 NFIA JASPAR yes 55273455
chr17 62138835 62138841 NFIC JASPAR yes 21273035
chr17 62138835 62138841 NFIC JASPAR yes 55273456
chr17 62138846 62138858 FOXI1 JASPAR yes 21273036
chr17 62138846 62138858 FOXI1 JASPAR yes 55273457
chr17 62138848 62138862 SPI1 JASPAR yes 21273037
chr17 62138848 62138862 SPI1 JASPAR yes 55273458
chr17 62138866 62138881 FOXA1 JASPAR yes 21273038
chr17 62138866 62138881 FOXA1 JASPAR yes 55273459
chr17 62138876 62138880 YY1 TRANSFAC yes 21273039
chr17 62138876 62138880 YY1 TRANSFAC yes 55273460
chr17 62138884 62138899 HSF1 JASPAR yes 21273040
chr17 62138884 62138899 HSF1 JASPAR yes 55273461
chr17 62138885 62138898 HSF1 JASPAR yes 21273041
chr17 62138885 62138898 HSF2 JASPAR yes 21273042
chr17 62138885 62138898 HSF4 JASPAR yes 21273043
chr17 62138885 62138898 HSF1 JASPAR yes 55273462
chr17 62138885 62138898 HSF2 JASPAR yes 55273463
chr17 62138885 62138898 HSF4 JASPAR yes 55273464
chr17 62138886 62138896 NFATC3 JASPAR yes 21273044
chr17 62138886 62138896 NFATC3 JASPAR yes 55273465
chr17 62138888 62138895 NFATC2 JASPAR yes 21273045
chr17 62138888 62138895 NFATC2 JASPAR yes 55273466
chr17 62138888 62138899 NFKB1 JASPAR yes 21273046
chr17 62138888 62138899 NFKB1 JASPAR yes 55273467
chr17 62138889 62138900 NFKB1 JASPAR yes 21273047
chr17 62138889 62138900 NFKB1 JASPAR yes 55273468
chr17 62138895 62138902 SPIB JASPAR yes 21273048
chr17 62138895 62138902 SPIB JASPAR yes 55273469
chr17 62138911 62138925 RORA JASPAR yes 21273049
chr17 62138911 62138925 RORA JASPAR yes 55273470
chr17 62138919 62138923 ESR1 TRANSFAC yes 21273050
chr17 62138919 62138923 ESR1 TRANSFAC yes 55273471
chr17 62138929 62138933 NFE TRANSFAC yes 21273051
chr17 62138929 62138933 NFE TRANSFAC yes 55273472
chr17 62138929 62138934 GATA1 TRANSFAC yes 21273052
chr17 62138929 62138934 GATA1 TRANSFAC yes 55273473
chr17 62138929 62138935 GATA3 JASPAR yes 21273053
chr17 62138929 62138935 GATA3 JASPAR yes 55273474
chr17 62138932 62138949 ZNF410 JASPAR yes 21273054
chr17 62138932 62138949 ZNF410 JASPAR yes 55273475
chr17 62138952 62138963 STAT1 JASPAR yes 21273055
chr17 62138952 62138963 STAT1 JASPAR yes 55273476
chr17 62138966 62138978 IRF1 JASPAR yes 21273056
chr17 62138966 62138978 IRF1 JASPAR yes 55273477
chr17 62138966 62138980 IRF7 JASPAR yes 21273057
chr17 62138966 62138980 IRF7 JASPAR yes 55273478
SNP sites on vista25500[chr17:62138721-62138967]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 62138898 rs115964563 C A
HSF1 HSF2 HSF4 NFKB1 SPIB
4981443
chr17 62138944 rs141687470 A G
ZNF410
4981444
Genes possibly regulated by vista25500[chr17:62138721-62138967]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 62015914 62050278 - SCN4A ENSG00000007314.7 62050278 0.96 1.0 16154 11557
chr17 62075711 62081664 + C17orf72 ENSG00000224383.3 62075711 0.87 0.98 16155 36990
chr17 62079954 62097994 - ICAM2 ENSG00000108622.6 62097994 0.8 0.95 16156 59273
chr17 62116502 62208179 - ERN1 ENSG00000178607.11 62208179 0.79 1.0 16157 30788
Expression level of Genes
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miRNAs possibly regulated by vista25500[chr17:62138721-62138967]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results