EnhancerDB
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  3. vista25501[chr17:62140311-62140756]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25501[chr17:62140311-62140756]
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Tissue distribution of vista25501
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Transcription factor that possibly regulate vista25501[chr17:62140311-62140756]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 62140512 62140882 EBF1 UCSC Txn Factor no Conserved 108282083
chr17 62140308 62140322 E2F7 JASPAR yes 21273058
chr17 62140308 62140322 E2F7 JASPAR yes 55273658
chr17 62140309 62140321 E2F8 JASPAR yes 21273059
chr17 62140309 62140321 E2F8 JASPAR yes 55273659
chr17 62140310 62140327 ZNF410 JASPAR yes 21273060
chr17 62140310 62140327 ZNF410 JASPAR yes 55273660
chr17 62140328 62140342 MTF1 JASPAR yes 21273061
chr17 62140328 62140342 MTF1 JASPAR yes 55273661
chr17 62140331 62140351 RREB1 JASPAR yes 21273062
chr17 62140331 62140351 RREB1 JASPAR yes 55273662
chr17 62140338 62140344 MZF1 JASPAR yes 21273063
chr17 62140338 62140344 MZF1 JASPAR yes 55273663
chr17 62140355 62140368 SMAD2 JASPAR yes 21273064
chr17 62140355 62140368 SMAD2 JASPAR yes 55273664
chr17 62140365 62140378 ZBTB18 JASPAR yes 21273065
chr17 62140365 62140378 ZBTB18 JASPAR yes 55273665
chr17 62140373 62140384 ELF5 JASPAR yes 21273066
chr17 62140373 62140384 ELF5 JASPAR yes 55273666
chr17 62140373 62140386 ELF1 JASPAR yes 21273067
chr17 62140373 62140386 ELF1 JASPAR yes 55273667
chr17 62140376 62140396 TP63 JASPAR yes 21273068
chr17 62140376 62140396 TP63 JASPAR yes 55273668
chr17 62140381 62140385 H4TF2 TRANSFAC yes 21273069
chr17 62140381 62140385 H4TF2 TRANSFAC yes 55273669
chr17 62140383 62140389 MZF1 JASPAR yes 21273070
chr17 62140383 62140389 MZF1 JASPAR yes 55273670
chr17 62140394 62140406 NHLH1 JASPAR yes 21273071
chr17 62140394 62140406 NHLH1 JASPAR yes 55273671
chr17 62140395 62140405 NHLH1 JASPAR yes 21273072
chr17 62140395 62140405 NHLH1 JASPAR yes 55273672
chr17 62140400 62140406 NFE2 TRANSFAC yes 21273073
chr17 62140400 62140406 NFE2 TRANSFAC yes 55273673
chr17 62140414 62140421 NFATC2 JASPAR yes 21273074
chr17 62140414 62140421 NFATC2 JASPAR yes 55273674
chr17 62140429 62140442 NR2F1 JASPAR yes 21273075
chr17 62140429 62140442 NR2F1 JASPAR yes 55273675
chr17 62140430 62140448 RARA JASPAR yes 21273076
chr17 62140430 62140448 RARA JASPAR yes 55273676
chr17 62140433 62140443 RORA JASPAR yes 21273077
chr17 62140433 62140443 RORA JASPAR yes 55273677
chr17 62140433 62140450 RARA JASPAR yes 21273078
chr17 62140433 62140450 RXRA JASPAR yes 21273079
chr17 62140433 62140450 RARA JASPAR yes 55273678
chr17 62140433 62140450 RXRA JASPAR yes 55273679
chr17 62140454 62140462 MEIS3 JASPAR yes 21273080
chr17 62140454 62140462 MEIS3 JASPAR yes 55273680
chr17 62140455 62140459 NFE TRANSFAC yes 21273081
chr17 62140455 62140459 NFE TRANSFAC yes 55273681
chr17 62140470 62140483 ELF1 JASPAR yes 21273082
chr17 62140470 62140483 ELF1 JASPAR yes 55273682
chr17 62140473 62140483 GABPA JASPAR yes 21273083
chr17 62140473 62140483 GABPA JASPAR yes 55273683
chr17 62140473 62140484 FLI1 JASPAR yes 21273084
chr17 62140473 62140484 FLI1 JASPAR yes 55273684
chr17 62140476 62140497 ZNF263 JASPAR yes 21273085
chr17 62140476 62140497 ZNF263 JASPAR yes 55273685
chr17 62140487 62140501 STAT1 JASPAR yes 21273086
chr17 62140487 62140501 STAT1 JASPAR yes 55273686
chr17 62140487 62140502 STAT2 JASPAR yes 21273087
chr17 62140487 62140502 STAT2 JASPAR yes 55273687
chr17 62140528 62140546 RARA JASPAR yes 21273088
chr17 62140528 62140546 RARA JASPAR yes 55273688
chr17 62140534 62140555 ZNF263 JASPAR yes 21273089
chr17 62140534 62140555 ZNF263 JASPAR yes 55273689
chr17 62140548 62140554 NFE2 TRANSFAC yes 21273090
chr17 62140548 62140554 NFE2 TRANSFAC yes 55273690
chr17 62140559 62140569 SP1 JASPAR yes 21273091
chr17 62140559 62140569 SP1 JASPAR yes 55273691
chr17 62140566 62140587 ZNF263 JASPAR yes 21273092
chr17 62140566 62140587 ZNF263 JASPAR yes 55273692
chr17 62140583 62140604 ZNF263 JASPAR yes 21273093
chr17 62140583 62140604 ZNF263 JASPAR yes 55273693
chr17 62140590 62140607 RARA JASPAR yes 21273094
chr17 62140590 62140607 RXRA JASPAR yes 21273095
chr17 62140590 62140607 RARA JASPAR yes 55273694
chr17 62140590 62140607 RXRA JASPAR yes 55273695
chr17 62140591 62140595 LFA1 TRANSFAC yes 21273096
chr17 62140591 62140595 LFA1 TRANSFAC yes 55273696
chr17 62140595 62140605 GABPA JASPAR yes 21273097
chr17 62140595 62140605 GABPA JASPAR yes 55273697
chr17 62140595 62140606 FLI1 JASPAR yes 21273098
chr17 62140595 62140606 FLI1 JASPAR yes 55273698
chr17 62140596 62140604 EHF JASPAR yes 21273099
chr17 62140596 62140604 EHF JASPAR yes 55273699
chr17 62140601 62140618 RARA JASPAR yes 21273100
chr17 62140601 62140618 RXRA JASPAR yes 21273101
chr17 62140601 62140618 RARA JASPAR yes 55273700
chr17 62140601 62140618 RXRA JASPAR yes 55273701
chr17 62140602 62140606 LFA1 TRANSFAC yes 21273102
chr17 62140602 62140606 LFA1 TRANSFAC yes 55273702
chr17 62140613 62140628 HSF1 JASPAR yes 21273103
chr17 62140613 62140628 HSF1 JASPAR yes 55273703
chr17 62140618 62140629 NFKB1 JASPAR yes 21273104
chr17 62140618 62140629 NFKB1 JASPAR yes 55273704
chr17 62140635 62140645 HOXB3 JASPAR yes 21273105
chr17 62140635 62140645 HOXB3 JASPAR yes 55273705
chr17 62140639 62140650 NFE2L2 JASPAR yes 21273106
chr17 62140639 62140650 NFE2L2 JASPAR yes 55273706
chr17 62140642 62140652 NFIA JASPAR yes 21273107
chr17 62140642 62140652 NFIA JASPAR yes 55273707
chr17 62140643 62140652 NFIX JASPAR yes 21273108
chr17 62140643 62140652 NFIX JASPAR yes 55273708
chr17 62140644 62140650 NFIC JASPAR yes 21273109
chr17 62140644 62140650 NFIC JASPAR yes 55273709
chr17 62140650 62140667 BCL6B JASPAR yes 21273110
chr17 62140650 62140667 BCL6B JASPAR yes 55273710
chr17 62140653 62140664 STAT1 JASPAR yes 21273111
chr17 62140653 62140664 STAT1 JASPAR yes 55273711
chr17 62140663 62140673 MSC JASPAR yes 21273112
chr17 62140663 62140673 MSC JASPAR yes 55273712
chr17 62140667 62140688 ZNF263 JASPAR yes 21273113
chr17 62140667 62140688 ZNF263 JASPAR yes 55273713
chr17 62140674 62140685 ELK4 JASPAR yes 21273114
chr17 62140674 62140685 FLI1 JASPAR yes 21273115
chr17 62140674 62140685 ELK4 JASPAR yes 55273714
chr17 62140674 62140685 FLI1 JASPAR yes 55273715
chr17 62140674 62140687 ELF3 JASPAR yes 21273116
chr17 62140674 62140687 ELF3 JASPAR yes 55273716
chr17 62140675 62140685 ELK1 JASPAR yes 21273117
chr17 62140675 62140685 ELK3 JASPAR yes 21273118
chr17 62140675 62140685 ETV5 JASPAR yes 21273119
chr17 62140675 62140685 ETV6 JASPAR yes 21273120
chr17 62140675 62140685 GABPA JASPAR yes 21273121
chr17 62140675 62140685 ELK1 JASPAR yes 55273717
chr17 62140675 62140685 ELK3 JASPAR yes 55273718
chr17 62140675 62140685 ETV5 JASPAR yes 55273719
chr17 62140675 62140685 ETV6 JASPAR yes 55273720
chr17 62140675 62140685 GABPA JASPAR yes 55273721
chr17 62140675 62140686 ELF5 JASPAR yes 21273122
chr17 62140675 62140686 ELF5 JASPAR yes 55273722
chr17 62140675 62140687 EHF JASPAR yes 21273123
chr17 62140675 62140687 ELF1 JASPAR yes 21273124
chr17 62140675 62140687 ELF4 JASPAR yes 21273125
chr17 62140675 62140687 EHF JASPAR yes 55273723
chr17 62140675 62140687 ELF1 JASPAR yes 55273724
chr17 62140675 62140687 ELF4 JASPAR yes 55273725
chr17 62140675 62140688 ELF1 JASPAR yes 21273126
chr17 62140675 62140688 ELF1 JASPAR yes 55273726
chr17 62140675 62140689 SPI1 JASPAR yes 21273127
chr17 62140675 62140689 SPI1 JASPAR yes 55273727
chr17 62140677 62140683 ETS1 JASPAR yes 21273128
chr17 62140677 62140683 SPI1 JASPAR yes 21273129
chr17 62140677 62140683 ETS1 JASPAR yes 55273728
chr17 62140677 62140683 SPI1 JASPAR yes 55273729
chr17 62140703 62140709 NFIC JASPAR yes 21273130
chr17 62140703 62140709 NFIC JASPAR yes 55273730
chr17 62140733 62140747 EBF1 JASPAR yes 21273131
chr17 62140733 62140747 EBF1 JASPAR yes 55273731
chr17 62140734 62140745 EBF1 JASPAR yes 21273132
chr17 62140734 62140745 EBF1 JASPAR yes 55273732
chr17 62140735 62140746 EBF1 JASPAR yes 21273133
chr17 62140735 62140746 EBF1 JASPAR yes 55273733
SNP sites on vista25501[chr17:62140311-62140756]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 62140323 rs141578559 TACCTGGTTAC T
ZNF410
4981454
chr17 62140392 rs112742168 T C
TP63
4981455
chr17 62140512 rs550006577 T C
EBF1
4981456
chr17 62140528 rs116599285 C T
EBF1 RARA
4981457
chr17 62140529 rs9900484 G A
EBF1 RARA
4981458
chr17 62140682 rs74478995 C T
EBF1 EHF ELF1 ELF3 ELF4 ELF5 ELK1 ELK3 ELK4 ETS1 ETV5 ETV6 FLI1 GABPA SPI1 ZNF263
4981459
Genes possibly regulated by vista25501[chr17:62140311-62140756]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 62015914 62050278 - SCN4A ENSG00000007314.7 62050278 0.96 1.0 16154 9967
chr17 62075711 62081664 + C17orf72 ENSG00000224383.3 62075711 0.87 0.98 16155 35400
chr17 62079954 62097994 - ICAM2 ENSG00000108622.6 62097994 0.8 0.95 16156 57683
chr17 62116502 62208179 - ERN1 ENSG00000178607.11 62208179 0.79 1.0 16157 32577
Expression level of Genes
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miRNAs possibly regulated by vista25501[chr17:62140311-62140756]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results