EnhancerDB
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  3. vista25506[chr17:62168583-62168746]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25506[chr17:62168583-62168746]
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Tissue distribution of vista25506
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Transcription factor that possibly regulate vista25506[chr17:62168583-62168746]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 62168561 62168745 RUNX3 UCSC Txn Factor no Conserved 108282252
chr17 62168579 62168590 TFAP2C JASPAR yes 21273346
chr17 62168579 62168590 TFAP2C JASPAR yes 55276451
chr17 62168606 62168612 NFIC JASPAR yes 21273347
chr17 62168606 62168612 NFIC JASPAR yes 55276452
chr17 62168612 62168629 RARA JASPAR yes 21273348
chr17 62168612 62168629 RARA JASPAR yes 55276453
chr17 62168615 62168628 POU2F2 JASPAR yes 21273349
chr17 62168615 62168628 POU2F2 JASPAR yes 55276454
chr17 62168630 62168651 IRF1 JASPAR yes 21273350
chr17 62168630 62168651 IRF1 JASPAR yes 55276455
chr17 62168641 62168655 STAT1 JASPAR yes 21273351
chr17 62168641 62168655 STAT1 JASPAR yes 55276456
chr17 62168641 62168656 STAT2 JASPAR yes 21273352
chr17 62168641 62168656 STAT2 JASPAR yes 55276457
chr17 62168642 62168652 ELK1 JASPAR yes 21273353
chr17 62168642 62168652 ELK1 JASPAR yes 55276458
chr17 62168643 62168654 ETV2 JASPAR yes 21273354
chr17 62168643 62168654 SPDEF JASPAR yes 21273355
chr17 62168643 62168654 ETV2 JASPAR yes 55276459
chr17 62168643 62168654 SPDEF JASPAR yes 55276460
chr17 62168644 62168653 ELK4 JASPAR yes 21273356
chr17 62168644 62168653 ELK4 JASPAR yes 55276461
chr17 62168644 62168654 ELK1 JASPAR yes 21273357
chr17 62168644 62168654 ELK3 JASPAR yes 21273358
chr17 62168644 62168654 ERF JASPAR yes 21273359
chr17 62168644 62168654 ERG JASPAR yes 21273360
chr17 62168644 62168654 ETS1 JASPAR yes 21273361
chr17 62168644 62168654 ETV1 JASPAR yes 21273362
chr17 62168644 62168654 ETV4 JASPAR yes 21273363
chr17 62168644 62168654 ETV5 JASPAR yes 21273364
chr17 62168644 62168654 FEV JASPAR yes 21273365
chr17 62168644 62168654 FLI1 JASPAR yes 21273366
chr17 62168644 62168654 ELK1 JASPAR yes 55276462
chr17 62168644 62168654 ELK3 JASPAR yes 55276463
chr17 62168644 62168654 ERF JASPAR yes 55276464
chr17 62168644 62168654 ERG JASPAR yes 55276465
chr17 62168644 62168654 ETS1 JASPAR yes 55276466
chr17 62168644 62168654 ETV1 JASPAR yes 55276467
chr17 62168644 62168654 ETV4 JASPAR yes 55276468
chr17 62168644 62168654 ETV5 JASPAR yes 55276469
chr17 62168644 62168654 FEV JASPAR yes 55276470
chr17 62168644 62168654 FLI1 JASPAR yes 55276471
chr17 62168644 62168655 ELK4 JASPAR yes 21273367
chr17 62168644 62168655 ELK4 JASPAR yes 55276472
chr17 62168646 62168652 ETS1 JASPAR yes 21273368
chr17 62168646 62168652 ETS1 JASPAR yes 55276473
chr17 62168652 62168656 NFE TRANSFAC yes 21273369
chr17 62168652 62168656 NFE TRANSFAC yes 55276474
chr17 62168662 62168673 DMRT3 JASPAR yes 21273370
chr17 62168662 62168673 DMRT3 JASPAR yes 55276475
chr17 62168670 62168679 LEF1 TRANSFAC yes 21273371
chr17 62168670 62168679 LEF1 TRANSFAC yes 55276476
chr17 62168674 62168688 JUN JASPAR yes 21273372
chr17 62168674 62168688 JUN JASPAR yes 55276477
chr17 62168677 62168688 FOSL2 JASPAR yes 21273373
chr17 62168677 62168688 JUNB JASPAR yes 21273374
chr17 62168677 62168688 FOSL2 JASPAR yes 55276478
chr17 62168677 62168688 JUNB JASPAR yes 55276479
chr17 62168678 62168689 FOS JASPAR yes 21273375
chr17 62168678 62168689 JUND JASPAR yes 21273376
chr17 62168678 62168689 NFE2 JASPAR yes 21273377
chr17 62168678 62168689 FOS JASPAR yes 55276480
chr17 62168678 62168689 JUND JASPAR yes 55276481
chr17 62168678 62168689 NFE2 JASPAR yes 55276482
chr17 62168679 62168688 JDP2 JASPAR yes 21273378
chr17 62168679 62168688 JDP2 JASPAR yes 55276483
chr17 62168679 62168693 JUN JASPAR yes 21273379
chr17 62168679 62168693 JUN JASPAR yes 55276484
chr17 62168680 62168691 BATF JASPAR yes 21273380
chr17 62168680 62168691 BATF JASPAR yes 55276485
chr17 62168709 62168713 YY1 TRANSFAC yes 21273381
chr17 62168709 62168713 YY1 TRANSFAC yes 55276486
SNP sites on vista25506[chr17:62168583-62168746]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 62168609 rs2172680 C T
NFIC RUNX3
4981710
chr17 62168648 rs147869002 G A,T
ELK1 ELK3 ELK4 ERF ERG ETS1 ETV1 ETV2 ETV4 ETV5 FEV FLI1 IRF1 RUNX3 SPDEF STAT1 STAT2
4981711
Genes possibly regulated by vista25506[chr17:62168583-62168746]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 62075711 62081664 + C17orf72 ENSG00000224383.3 62075711 0.87 0.98 16155 7128
chr17 62079954 62097994 - ICAM2 ENSG00000108622.6 62097994 0.8 0.95 16156 29411
chr17 62116502 62208179 - ERN1 ENSG00000178607.11 62208179 0.79 1.0 16157 60567
Expression level of Genes
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miRNAs possibly regulated by vista25506[chr17:62168583-62168746]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results