EnhancerDB
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  3. vista25520[chr17:62408874-62409016]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25520[chr17:62408874-62409016]
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Tissue distribution of vista25520
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Transcription factor that possibly regulate vista25520[chr17:62408874-62409016]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 62408864 62408876 YY1 JASPAR yes 21273960
chr17 62408864 62408876 YY1 JASPAR yes 55298504
chr17 62408864 62408878 ZIC1 JASPAR yes 21273961
chr17 62408864 62408878 ZIC1 JASPAR yes 55298505
chr17 62408900 62408905 MYC TRANSFAC yes 21273962
chr17 62408900 62408905 MYC TRANSFAC yes 55298506
chr17 62408902 62408912 CEBPB JASPAR yes 21273963
chr17 62408902 62408912 CEBPD JASPAR yes 21273964
chr17 62408902 62408912 CEBPE JASPAR yes 21273965
chr17 62408902 62408912 CEBPG JASPAR yes 21273966
chr17 62408902 62408912 CEBPB JASPAR yes 55298507
chr17 62408902 62408912 CEBPD JASPAR yes 55298508
chr17 62408902 62408912 CEBPE JASPAR yes 55298509
chr17 62408902 62408912 CEBPG JASPAR yes 55298510
chr17 62408913 62408917 H4TF2 TRANSFAC yes 21273967
chr17 62408913 62408917 H4TF2 TRANSFAC yes 55298511
chr17 62408918 62408930 ELF1 JASPAR yes 21273968
chr17 62408918 62408930 ELF1 JASPAR yes 55298512
chr17 62408919 62408930 ETV2 JASPAR yes 21273969
chr17 62408919 62408930 SPDEF JASPAR yes 21273970
chr17 62408919 62408930 ETV2 JASPAR yes 55298513
chr17 62408919 62408930 SPDEF JASPAR yes 55298514
chr17 62408920 62408929 ELK4 JASPAR yes 21273971
chr17 62408920 62408929 ELK4 JASPAR yes 55298515
chr17 62408920 62408930 ELK1 JASPAR yes 21273972
chr17 62408920 62408930 ELK3 JASPAR yes 21273973
chr17 62408920 62408930 ERF JASPAR yes 21273974
chr17 62408920 62408930 ERG JASPAR yes 21273975
chr17 62408920 62408930 ETS1 JASPAR yes 21273976
chr17 62408920 62408930 ETV1 JASPAR yes 21273977
chr17 62408920 62408930 ETV3 JASPAR yes 21273978
chr17 62408920 62408930 ETV4 JASPAR yes 21273979
chr17 62408920 62408930 ETV5 JASPAR yes 21273980
chr17 62408920 62408930 FEV JASPAR yes 21273981
chr17 62408920 62408930 FLI1 JASPAR yes 21273982
chr17 62408920 62408930 ELK1 JASPAR yes 55298516
chr17 62408920 62408930 ELK3 JASPAR yes 55298517
chr17 62408920 62408930 ERF JASPAR yes 55298518
chr17 62408920 62408930 ERG JASPAR yes 55298519
chr17 62408920 62408930 ETS1 JASPAR yes 55298520
chr17 62408920 62408930 ETV1 JASPAR yes 55298521
chr17 62408920 62408930 ETV3 JASPAR yes 55298522
chr17 62408920 62408930 ETV4 JASPAR yes 55298523
chr17 62408920 62408930 ETV5 JASPAR yes 55298524
chr17 62408920 62408930 FEV JASPAR yes 55298525
chr17 62408920 62408930 FLI1 JASPAR yes 55298526
chr17 62408925 62408942 RARA JASPAR yes 21273983
chr17 62408925 62408942 RARA JASPAR yes 55298527
chr17 62408927 62408938 NRL JASPAR yes 21273984
chr17 62408927 62408938 NRL JASPAR yes 55298528
chr17 62408934 62408955 ZNF263 JASPAR yes 21273985
chr17 62408934 62408955 ZNF263 JASPAR yes 55298529
chr17 62408951 62408966 NFYB JASPAR yes 21273986
chr17 62408951 62408966 NFYB JASPAR yes 55298530
chr17 62408953 62408969 NFYA JASPAR yes 21273987
chr17 62408953 62408969 NFYA JASPAR yes 55298531
chr17 62408958 62408962 H1TF2 TRANSFAC yes 21273988
chr17 62408958 62408962 NFE TRANSFAC yes 21273989
chr17 62408958 62408962 SRF TRANSFAC yes 21273990
chr17 62408958 62408962 H1TF2 TRANSFAC yes 55298532
chr17 62408958 62408962 NFE TRANSFAC yes 55298533
chr17 62408958 62408962 SRF TRANSFAC yes 55298534
chr17 62408964 62408977 ELF1 JASPAR yes 21273991
chr17 62408964 62408977 ELF1 JASPAR yes 55298535
chr17 62408966 62408977 ELF5 JASPAR yes 21273992
chr17 62408966 62408977 ELF5 JASPAR yes 55298536
chr17 62408967 62408978 FLI1 JASPAR yes 21273993
chr17 62408967 62408978 FLI1 JASPAR yes 55298537
chr17 62408987 62408992 SP1 TRANSFAC yes 21273994
chr17 62408987 62408992 SP1 TRANSFAC yes 55298538
chr17 62409010 62409014 YY1 TRANSFAC yes 21273995
chr17 62409010 62409014 YY1 TRANSFAC yes 55298539
SNP sites on vista25520[chr17:62408874-62409016]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 62408889 rs139240472 C T no 4983725
chr17 62408907 rs549152974 C T
CEBPB CEBPD CEBPE CEBPG
4983726
chr17 62408923 rs28450650 C T
ELF1 ELK1 ELK3 ELK4 ERF ERG ETS1 ETV1 ETV2 ETV3 ETV4 ETV5 FEV FLI1 SPDEF
4983727
chr17 62408949 rs12936766 C G
ZNF263
4983728
chr17 62408985 rs149600334 G A no 4983729
Genes possibly regulated by vista25520[chr17:62408874-62409016]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 62224587 62340661 - TEX2 ENSG00000136478.3 62340661 0.62 0.99 16158 31787
chr17 62461569 62464760 + MILR1 ENSG00000271605.1 62461569 0.9 0.98 16159 47447
chr17 62473902 62493154 - POLG2 ENSG00000256525.2 62493154 0.77 1.0 16160 15862
chr17 62495734 62504317 - DDX5 ENSG00000108654.7 62504317 0.64 1.0 16161 4699
chr17 62502706 62538579 + CEP95 ENSG00000258890.2 62502706 0.8 1.0 16162 6310
Expression level of Genes
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miRNAs possibly regulated by vista25520[chr17:62408874-62409016]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results