EnhancerDB
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  3. vista25521[chr17:62409252-62409599]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25521[chr17:62409252-62409599]
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Tissue distribution of vista25521
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Transcription factor that possibly regulate vista25521[chr17:62409252-62409599]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 62409312 62409642 EP300 UCSC Txn Factor no Conserved 108282402
chr17 62409312 62409642 EP300 UCSC Txn Factor no Conserved 108282403
chr17 62409393 62410018 TFAP2C UCSC Txn Factor no Conserved 108282438
chr17 62409393 62410018 TFAP2C UCSC Txn Factor no Conserved 108282439
chr17 62409422 62409744 JUND UCSC Txn Factor no Conserved 108282458
chr17 62409422 62409744 JUND UCSC Txn Factor no Conserved 108282459
chr17 62409235 62409256 ZNF263 JASPAR yes 21273996
chr17 62409235 62409256 ZNF263 JASPAR yes 55298581
chr17 62409238 62409259 ZNF263 JASPAR yes 21273997
chr17 62409238 62409259 ZNF263 JASPAR yes 55298582
chr17 62409241 62409262 ZNF263 JASPAR yes 21273998
chr17 62409241 62409262 ZNF263 JASPAR yes 55298583
chr17 62409245 62409261 ZNF143 JASPAR yes 21273999
chr17 62409245 62409261 ZNF143 JASPAR yes 55298584
chr17 62409253 62409258 SP1 TRANSFAC yes 21274000
chr17 62409253 62409258 SP1 TRANSFAC yes 55298585
chr17 62409256 62409262 MAZ TRANSFAC yes 21274001
chr17 62409256 62409262 MAZ TRANSFAC yes 55298586
chr17 62409291 62409311 PPARG JASPAR yes 21274002
chr17 62409291 62409311 PPARG JASPAR yes 55298587
chr17 62409300 62409305 SP1 TRANSFAC yes 21274003
chr17 62409300 62409305 SP1 TRANSFAC yes 55298588
chr17 62409315 62409325 SP1 JASPAR yes 21274004
chr17 62409315 62409325 SP1 JASPAR yes 55298589
chr17 62409316 62409324 SP1 TRANSFAC yes 21274005
chr17 62409316 62409324 SP1 TRANSFAC yes 55298590
chr17 62409319 62409330 TFAP2A JASPAR yes 21274006
chr17 62409319 62409330 TFAP2C JASPAR yes 21274007
chr17 62409319 62409330 TFAP2A JASPAR yes 55298591
chr17 62409319 62409330 TFAP2C JASPAR yes 55298592
chr17 62409329 62409344 AR JASPAR yes 21274008
chr17 62409329 62409344 AR JASPAR yes 55298593
chr17 62409343 62409364 REST JASPAR yes 21274009
chr17 62409343 62409364 REST JASPAR yes 55298594
chr17 62409353 62409364 NRF1 JASPAR yes 21274010
chr17 62409353 62409364 NRF1 JASPAR yes 55298595
chr17 62409354 62409358 LFA1 TRANSFAC yes 21274011
chr17 62409354 62409358 LFA1 TRANSFAC yes 55298596
chr17 62409369 62409373 NFE TRANSFAC yes 21274012
chr17 62409369 62409373 NFE TRANSFAC yes 55298597
chr17 62409369 62409382 SMAD2 JASPAR yes 21274013
chr17 62409369 62409382 SMAD2 JASPAR yes 55298598
chr17 62409373 62409377 NFE TRANSFAC yes 21274014
chr17 62409373 62409377 NFE TRANSFAC yes 55298599
chr17 62409376 62409391 ZIC3 JASPAR yes 21274015
chr17 62409376 62409391 ZIC4 JASPAR yes 21274016
chr17 62409376 62409391 ZIC3 JASPAR yes 55298600
chr17 62409376 62409391 ZIC4 JASPAR yes 55298601
chr17 62409377 62409391 ZIC1 JASPAR yes 21274017
chr17 62409377 62409391 ZIC1 JASPAR yes 55298602
chr17 62409386 62409390 ESR1 TRANSFAC yes 21274018
chr17 62409386 62409390 ESR1 TRANSFAC yes 55298603
chr17 62409417 62409428 ETV2 JASPAR yes 21274019
chr17 62409417 62409428 SPDEF JASPAR yes 21274020
chr17 62409417 62409428 ETV2 JASPAR yes 55298604
chr17 62409417 62409428 SPDEF JASPAR yes 55298605
chr17 62409419 62409424 GATA2 JASPAR yes 21274021
chr17 62409419 62409424 GATA2 JASPAR yes 55298606
chr17 62409428 62409434 MZF1 JASPAR yes 21274022
chr17 62409428 62409434 MZF1 JASPAR yes 55298607
chr17 62409448 62409451 MYB TRANSFAC yes 21274023
chr17 62409448 62409451 MYB TRANSFAC yes 55298608
chr17 62409455 62409459 NFE TRANSFAC yes 21274024
chr17 62409455 62409459 NFE TRANSFAC yes 55298609
chr17 62409458 62409466 GATA5 JASPAR yes 21274025
chr17 62409458 62409466 GATA5 JASPAR yes 55298610
chr17 62409474 62409480 NFE2 TRANSFAC yes 21274026
chr17 62409474 62409480 NFE2 TRANSFAC yes 55298611
chr17 62409477 62409483 SP1 TRANSFAC yes 21274027
chr17 62409477 62409483 SP1 TRANSFAC yes 55298612
chr17 62409477 62409487 SP1 JASPAR yes 21274028
chr17 62409477 62409487 SP1 JASPAR yes 55298613
chr17 62409516 62409521 SP1 TRANSFAC yes 21274029
chr17 62409516 62409521 SP1 TRANSFAC yes 55298614
chr17 62409528 62409532 NFE TRANSFAC yes 21274030
chr17 62409528 62409532 NFE TRANSFAC yes 55298615
chr17 62409546 62409558 PKNOX2 JASPAR yes 21274031
chr17 62409546 62409558 PKNOX2 JASPAR yes 55298616
chr17 62409561 62409579 MAFF JASPAR yes 21274032
chr17 62409561 62409579 MAFF JASPAR yes 55298617
chr17 62409563 62409584 MAFG JASPAR yes 21274033
chr17 62409563 62409584 MAFG JASPAR yes 55298618
chr17 62409564 62409578 JUN JASPAR yes 21274034
chr17 62409564 62409578 JUN JASPAR yes 55298619
chr17 62409566 62409577 BATF JASPAR yes 21274035
chr17 62409566 62409577 BATF JASPAR yes 55298620
chr17 62409568 62409579 FOS JASPAR yes 21274036
chr17 62409568 62409579 FOSL1 JASPAR yes 21274037
chr17 62409568 62409579 JUND JASPAR yes 21274038
chr17 62409568 62409579 FOS JASPAR yes 55298621
chr17 62409568 62409579 FOSL1 JASPAR yes 55298622
chr17 62409568 62409579 JUND JASPAR yes 55298623
chr17 62409570 62409576 JUN TRANSFAC yes 21274039
chr17 62409570 62409576 JUN TRANSFAC yes 55298624
SNP sites on vista25521[chr17:62409252-62409599]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 62409285 rs59341491 G A no 4983732
chr17 62409295 rs34168052 C T
PPARG
4983733
chr17 62409306 rs117795383 C T
PPARG
4983734
chr17 62409315 rs529353562 G T
EP300 SP1
4983735
chr17 62409352 rs549021970 C T
EP300 REST
4983736
chr17 62409579 rs528630239 C T
EP300 FOS FOSL1 JUND MAFF MAFG TFAP2C
4983737
chr17 62409586 rs4968721 C G
EP300 JUND TFAP2C
4983738
Genes possibly regulated by vista25521[chr17:62409252-62409599]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 62224587 62340661 - TEX2 ENSG00000136478.3 62340661 0.62 0.99 16158 31409
chr17 62461569 62464760 + MILR1 ENSG00000271605.1 62461569 0.9 0.98 16159 48030
chr17 62473902 62493154 - POLG2 ENSG00000256525.2 62493154 0.77 1.0 16160 16445
chr17 62495734 62504317 - DDX5 ENSG00000108654.7 62504317 0.64 1.0 16161 5282
chr17 62502706 62538579 + CEP95 ENSG00000258890.2 62502706 0.8 1.0 16162 6893
Expression level of Genes
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miRNAs possibly regulated by vista25521[chr17:62409252-62409599]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results