EnhancerDB
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  3. vista25527[chr17:62534383-62534677]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25527[chr17:62534383-62534677]
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Tissue distribution of vista25527
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Transcription factor that possibly regulate vista25527[chr17:62534383-62534677]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 62534392 62534396 TEAD2 TRANSFAC yes 21274324
chr17 62534392 62534396 TEAD2 TRANSFAC yes 55299493
chr17 62534393 62534401 RHOXF1 JASPAR yes 21274325
chr17 62534393 62534401 RHOXF1 JASPAR yes 55299494
chr17 62534394 62534415 LUN1 TRANSFAC yes 21274326
chr17 62534394 62534415 LUN1 TRANSFAC yes 55299495
chr17 62534418 62534423 SP1 TRANSFAC yes 21274327
chr17 62534418 62534423 SP1 TRANSFAC yes 55299496
chr17 62534419 62534424 SP1 TRANSFAC yes 21274328
chr17 62534419 62534424 SP1 TRANSFAC yes 55299497
chr17 62534424 62534430 ZNF354C JASPAR yes 21274329
chr17 62534424 62534430 ZNF354C JASPAR yes 55299498
chr17 62534433 62534446 NR2F1 JASPAR yes 21274330
chr17 62534433 62534446 NR2F1 JASPAR yes 55299499
chr17 62534434 62534442 CREB1 JASPAR yes 21274331
chr17 62534434 62534442 CREB1 JASPAR yes 55299500
chr17 62534437 62534441 ESR1 TRANSFAC yes 21274332
chr17 62534437 62534441 ESR1 TRANSFAC yes 55299501
chr17 62534492 62534503 CEBPA JASPAR yes 21274333
chr17 62534492 62534503 CEBPA JASPAR yes 55299502
chr17 62534492 62534504 HLF JASPAR yes 21274334
chr17 62534492 62534504 HLF JASPAR yes 55299503
chr17 62534493 62534504 CEBPB JASPAR yes 21274335
chr17 62534493 62534504 CEBPB JASPAR yes 55299504
chr17 62534504 62534508 NFE TRANSFAC yes 21274336
chr17 62534504 62534508 NFE TRANSFAC yes 55299505
chr17 62534510 62534525 MEF2C JASPAR yes 21274337
chr17 62534510 62534525 MEF2C JASPAR yes 55299506
chr17 62534511 62534526 MEF2A JASPAR yes 21274338
chr17 62534511 62534526 MEF2A JASPAR yes 55299507
chr17 62534512 62534524 MEF2A JASPAR yes 21274339
chr17 62534512 62534524 MEF2B JASPAR yes 21274340
chr17 62534512 62534524 MEF2D JASPAR yes 21274341
chr17 62534512 62534524 MEF2A JASPAR yes 55299508
chr17 62534512 62534524 MEF2B JASPAR yes 55299509
chr17 62534512 62534524 MEF2D JASPAR yes 55299510
chr17 62534532 62534548 ZNF143 JASPAR yes 21274342
chr17 62534532 62534548 ZNF143 JASPAR yes 55299511
chr17 62534546 62534558 NHLH1 JASPAR yes 21274343
chr17 62534546 62534558 NHLH1 JASPAR yes 55299512
chr17 62534547 62534557 TFAP4 JASPAR yes 21274344
chr17 62534547 62534557 TFAP4 JASPAR yes 55299513
chr17 62534579 62534600 ZNF263 JASPAR yes 21274345
chr17 62534579 62534600 ZNF263 JASPAR yes 55299514
chr17 62534586 62534603 ESR1 JASPAR yes 21274346
chr17 62534586 62534603 ESR1 JASPAR yes 55299515
chr17 62534595 62534605 SREBF1 JASPAR yes 21274347
chr17 62534595 62534605 SREBF1 JASPAR yes 55299516
chr17 62534604 62534615 CEBPB JASPAR yes 21274348
chr17 62534604 62534615 CEBPB JASPAR yes 55299517
chr17 62534605 62534616 CEBPA JASPAR yes 21274349
chr17 62534605 62534616 CEBPA JASPAR yes 55299518
chr17 62534628 62534632 LFA1 TRANSFAC yes 21274350
chr17 62534628 62534632 LFA1 TRANSFAC yes 55299519
chr17 62534630 62534651 IRF1 JASPAR yes 21274351
chr17 62534630 62534651 IRF1 JASPAR yes 55299520
chr17 62534632 62534647 IRF9 JASPAR yes 21274352
chr17 62534632 62534647 IRF9 JASPAR yes 55299521
chr17 62534633 62534647 IRF7 JASPAR yes 21274353
chr17 62534633 62534647 IRF8 JASPAR yes 21274354
chr17 62534633 62534647 IRF7 JASPAR yes 55299522
chr17 62534633 62534647 IRF8 JASPAR yes 55299523
chr17 62534634 62534652 IRF2 JASPAR yes 21274355
chr17 62534634 62534652 IRF2 JASPAR yes 55299524
chr17 62534658 62534669 CDX2 JASPAR yes 21274356
chr17 62534658 62534669 CDX2 JASPAR yes 55299525
chr17 62534659 62534670 HOXA10 JASPAR yes 21274357
chr17 62534659 62534670 HOXA10 JASPAR yes 55299526
chr17 62534660 62534669 CDX1 JASPAR yes 21274358
chr17 62534660 62534669 CDX1 JASPAR yes 55299527
chr17 62534660 62534670 HOXA13 JASPAR yes 21274359
chr17 62534660 62534670 HOXB13 JASPAR yes 21274360
chr17 62534660 62534670 HOXD13 JASPAR yes 21274361
chr17 62534660 62534670 HOXA13 JASPAR yes 55299528
chr17 62534660 62534670 HOXB13 JASPAR yes 55299529
chr17 62534660 62534670 HOXD13 JASPAR yes 55299530
chr17 62534660 62534676 POU4F2 JASPAR yes 21274362
chr17 62534660 62534676 POU4F3 JASPAR yes 21274363
chr17 62534660 62534676 POU4F2 JASPAR yes 55299531
chr17 62534660 62534676 POU4F3 JASPAR yes 55299532
chr17 62534662 62534676 POU4F1 JASPAR yes 21274364
chr17 62534662 62534676 POU4F1 JASPAR yes 55299533
chr17 62534664 62534670 TBP TRANSFAC yes 21274365
chr17 62534664 62534670 TBP TRANSFAC yes 55299534
chr17 62534668 62534684 ZNF143 JASPAR yes 21274366
chr17 62534668 62534684 ZNF143 JASPAR yes 55299535
chr17 62534673 62534677 YY1 TRANSFAC yes 21274367
chr17 62534673 62534677 YY1 TRANSFAC yes 55299536
SNP sites on vista25527[chr17:62534383-62534677]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 62534388 rs554641671 A G no 4984006
chr17 62534459 rs8082122 T C no 4984007
chr17 62534568 rs112664817 C T no 4984008
chr17 62534652 rs78683365 C A
IRF2
4984009
chr17 62534662 rs74414615 T A
CDX1 CDX2 HOXA10 HOXA13 HOXB13 HOXD13 POU4F1 POU4F2 POU4F3
4984010
chr17 62534668 rs112156919 A T
CDX1 CDX2 HOXA10 HOXA13 HOXB13 HOXD13 POU4F1 POU4F2 POU4F3 TBP ZNF143
4984011
Genes possibly regulated by vista25527[chr17:62534383-62534677]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 62461569 62464760 + MILR1 ENSG00000271605.1 62461569 0.9 0.98 16159 27186
chr17 62473902 62493154 - POLG2 ENSG00000256525.2 62493154 0.77 1.0 16160 58771
chr17 62495734 62504317 - DDX5 ENSG00000108654.7 62504317 0.64 1.0 16161 69934
chr17 62502706 62538579 + CEP95 ENSG00000258890.2 62502706 0.8 1.0 16162 68323
Expression level of Genes
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miRNAs possibly regulated by vista25527[chr17:62534383-62534677]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results