EnhancerDB
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  3. vista25544[chr17:62985207-62985536]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25544[chr17:62985207-62985536]
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Tissue distribution of vista25544
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Transcription factor that possibly regulate vista25544[chr17:62985207-62985536]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 62985205 62985216 FOXP2 JASPAR yes 21275151
chr17 62985205 62985216 FOXP2 JASPAR yes 55335959
chr17 62985207 62985217 HOXA13 JASPAR yes 21275152
chr17 62985207 62985217 HOXA13 JASPAR yes 55335960
chr17 62985207 62985218 HOXA10 JASPAR yes 21275153
chr17 62985207 62985218 HOXA10 JASPAR yes 55335961
chr17 62985208 62985217 CDX1 JASPAR yes 21275154
chr17 62985208 62985217 CDX1 JASPAR yes 55335962
chr17 62985208 62985219 CDX2 JASPAR yes 21275155
chr17 62985208 62985219 CDX2 JASPAR yes 55335963
chr17 62985212 62985223 STAT1 JASPAR yes 21275156
chr17 62985212 62985223 STAT1 JASPAR yes 55335964
chr17 62985227 62985231 H1TF2 TRANSFAC yes 21275157
chr17 62985227 62985231 NFE TRANSFAC yes 21275158
chr17 62985227 62985231 SRF TRANSFAC yes 21275159
chr17 62985227 62985231 H1TF2 TRANSFAC yes 55335965
chr17 62985227 62985231 NFE TRANSFAC yes 55335966
chr17 62985227 62985231 SRF TRANSFAC yes 55335967
chr17 62985231 62985234 MYB TRANSFAC yes 21275160
chr17 62985231 62985234 MYB TRANSFAC yes 55335968
chr17 62985241 62985255 TLX1 JASPAR yes 21275161
chr17 62985241 62985255 TLX1 JASPAR yes 55335969
chr17 62985245 62985260 TFAP2A JASPAR yes 21275162
chr17 62985245 62985260 TFAP2A JASPAR yes 55335970
chr17 62985246 62985261 HNF4G JASPAR yes 21275163
chr17 62985246 62985261 HNF4G JASPAR yes 55335971
chr17 62985248 62985260 TFAP2A JASPAR yes 21275164
chr17 62985248 62985260 TFAP2B JASPAR yes 21275165
chr17 62985248 62985260 TFAP2C JASPAR yes 21275166
chr17 62985248 62985260 TFAP2A JASPAR yes 55335972
chr17 62985248 62985260 TFAP2B JASPAR yes 55335973
chr17 62985248 62985260 TFAP2C JASPAR yes 55335974
chr17 62985261 62985267 HiNF-A TRANSFAC yes 21275167
chr17 62985261 62985267 HiNF-A TRANSFAC yes 55335975
chr17 62985265 62985271 SOX10 JASPAR yes 21275168
chr17 62985265 62985271 SOX10 JASPAR yes 55335976
chr17 62985277 62985281 YY1 TRANSFAC yes 21275169
chr17 62985277 62985281 YY1 TRANSFAC yes 55335977
chr17 62985278 62985293 SCRT1 JASPAR yes 21275170
chr17 62985278 62985293 SCRT1 JASPAR yes 55335978
chr17 62985280 62985292 GRHL1 JASPAR yes 21275171
chr17 62985280 62985292 GRHL1 JASPAR yes 55335979
chr17 62985281 62985284 MYB TRANSFAC yes 21275172
chr17 62985281 62985284 MYB TRANSFAC yes 55335980
chr17 62985284 62985298 STAT1 JASPAR yes 21275173
chr17 62985284 62985298 STAT1 JASPAR yes 55335981
chr17 62985293 62985310 BCL6B JASPAR yes 21275174
chr17 62985293 62985310 BCL6B JASPAR yes 55335982
chr17 62985335 62985340 GATA2 JASPAR yes 21275175
chr17 62985335 62985340 GATA2 JASPAR yes 55335983
chr17 62985339 62985357 TP73 JASPAR yes 21275176
chr17 62985339 62985357 TP73 JASPAR yes 55335984
chr17 62985348 62985361 SCRT2 JASPAR yes 21275177
chr17 62985348 62985361 SCRT2 JASPAR yes 55335985
chr17 62985357 62985361 ESR1 TRANSFAC yes 21275178
chr17 62985357 62985361 ESR1 TRANSFAC yes 55335986
chr17 62985365 62985380 MEF2A JASPAR yes 21275179
chr17 62985365 62985380 MEF2A JASPAR yes 55335987
chr17 62985366 62985381 MEF2C JASPAR yes 21275180
chr17 62985366 62985381 MEF2C JASPAR yes 55335988
chr17 62985367 62985377 ALX3 JASPAR yes 21275181
chr17 62985367 62985377 MEOX2 JASPAR yes 21275182
chr17 62985367 62985377 ALX3 JASPAR yes 55335989
chr17 62985367 62985377 MEOX2 JASPAR yes 55335990
chr17 62985367 62985379 MEF2A JASPAR yes 21275183
chr17 62985367 62985379 MEF2B JASPAR yes 21275184
chr17 62985367 62985379 MEF2D JASPAR yes 21275185
chr17 62985367 62985379 MEF2A JASPAR yes 55335991
chr17 62985367 62985379 MEF2B JASPAR yes 55335992
chr17 62985367 62985379 MEF2D JASPAR yes 55335993
chr17 62985368 62985376 LBX1 JASPAR yes 21275186
chr17 62985368 62985376 PDX1 JASPAR yes 21275187
chr17 62985368 62985376 VAX1 JASPAR yes 21275188
chr17 62985368 62985376 VAX2 JASPAR yes 21275189
chr17 62985368 62985376 VSX1 JASPAR yes 21275190
chr17 62985368 62985376 VSX2 JASPAR yes 21275191
chr17 62985368 62985376 LBX1 JASPAR yes 55335994
chr17 62985368 62985376 PDX1 JASPAR yes 55335995
chr17 62985368 62985376 VAX1 JASPAR yes 55335996
chr17 62985368 62985376 VAX2 JASPAR yes 55335997
chr17 62985368 62985376 VSX1 JASPAR yes 55335998
chr17 62985368 62985376 VSX2 JASPAR yes 55335999
chr17 62985368 62985378 MEF2A JASPAR yes 21275192
chr17 62985368 62985378 MEF2A JASPAR yes 55336000
chr17 62985371 62985383 POU2F1 JASPAR yes 21275193
chr17 62985371 62985383 POU2F1 JASPAR yes 55336001
chr17 62985371 62985384 POU3F3 JASPAR yes 21275194
chr17 62985371 62985384 POU3F3 JASPAR yes 55336002
chr17 62985371 62985385 POU1F1 JASPAR yes 21275195
chr17 62985371 62985385 POU1F1 JASPAR yes 55336003
chr17 62985372 62985384 POU3F1 JASPAR yes 21275196
chr17 62985372 62985384 POU3F2 JASPAR yes 21275197
chr17 62985372 62985384 POU3F1 JASPAR yes 55336004
chr17 62985372 62985384 POU3F2 JASPAR yes 55336005
chr17 62985373 62985382 POU3F4 JASPAR yes 21275198
chr17 62985373 62985382 POU5F1B JASPAR yes 21275199
chr17 62985373 62985382 POU3F4 JASPAR yes 55336006
chr17 62985373 62985382 POU5F1B JASPAR yes 55336007
chr17 62985375 62985386 NFKB1 JASPAR yes 21275200
chr17 62985375 62985386 NFKB1 JASPAR yes 55336008
chr17 62985376 62985386 REL JASPAR yes 21275201
chr17 62985376 62985386 REL JASPAR yes 55336009
chr17 62985394 62985409 SCRT1 JASPAR yes 21275202
chr17 62985394 62985409 SCRT1 JASPAR yes 55336010
chr17 62985403 62985417 JUN JASPAR yes 21275203
chr17 62985403 62985417 JUN JASPAR yes 55336011
chr17 62985406 62985417 FOSL2 JASPAR yes 21275204
chr17 62985406 62985417 JUNB JASPAR yes 21275205
chr17 62985406 62985417 FOSL2 JASPAR yes 55336012
chr17 62985406 62985417 JUNB JASPAR yes 55336013
chr17 62985407 62985418 FOS JASPAR yes 21275206
chr17 62985407 62985418 FOSL1 JASPAR yes 21275207
chr17 62985407 62985418 JUND JASPAR yes 21275208
chr17 62985407 62985418 NFE2 JASPAR yes 21275209
chr17 62985407 62985418 FOS JASPAR yes 55336014
chr17 62985407 62985418 FOSL1 JASPAR yes 55336015
chr17 62985407 62985418 JUND JASPAR yes 55336016
chr17 62985407 62985418 NFE2 JASPAR yes 55336017
chr17 62985408 62985417 JDP2 JASPAR yes 21275210
chr17 62985408 62985417 JDP2 JASPAR yes 55336018
chr17 62985408 62985419 FOSL2 JASPAR yes 21275211
chr17 62985408 62985419 JUNB JASPAR yes 21275212
chr17 62985408 62985419 FOSL2 JASPAR yes 55336019
chr17 62985408 62985419 JUNB JASPAR yes 55336020
chr17 62985408 62985422 JUN JASPAR yes 21275213
chr17 62985408 62985422 JUN JASPAR yes 55336021
chr17 62985413 62985428 ZIC4 JASPAR yes 21275214
chr17 62985413 62985428 ZIC4 JASPAR yes 55336022
chr17 62985421 62985436 MYBL2 JASPAR yes 21275215
chr17 62985421 62985436 MYBL2 JASPAR yes 55336023
chr17 62985428 62985431 MYB TRANSFAC yes 21275216
chr17 62985428 62985431 MYB TRANSFAC yes 55336024
chr17 62985458 62985472 POU1F1 JASPAR yes 21275217
chr17 62985458 62985472 POU1F1 JASPAR yes 55336025
chr17 62985459 62985471 POU3F2 JASPAR yes 21275218
chr17 62985459 62985471 POU3F2 JASPAR yes 55336026
chr17 62985460 62985464 YY1 TRANSFAC yes 21275219
chr17 62985460 62985464 YY1 TRANSFAC yes 55336027
chr17 62985475 62985479 NFE TRANSFAC yes 21275220
chr17 62985475 62985479 NFE TRANSFAC yes 55336028
chr17 62985475 62985480 GATA1 TRANSFAC yes 21275221
chr17 62985475 62985480 GATA1 TRANSFAC yes 55336029
chr17 62985475 62985481 GATA3 JASPAR yes 21275222
chr17 62985475 62985481 GATA3 JASPAR yes 55336030
chr17 62985488 62985492 YY1 TRANSFAC yes 21275223
chr17 62985488 62985492 YY1 TRANSFAC yes 55336031
chr17 62985489 62985504 FOXP1 JASPAR yes 21275224
chr17 62985489 62985504 FOXP1 JASPAR yes 55336032
chr17 62985490 62985505 FOXP1 JASPAR yes 21275225
chr17 62985490 62985505 FOXP1 JASPAR yes 55336033
chr17 62985491 62985506 FOXP1 JASPAR yes 21275226
chr17 62985491 62985506 FOXP1 JASPAR yes 55336034
chr17 62985519 62985523 NFE TRANSFAC yes 21275227
chr17 62985519 62985523 NFE TRANSFAC yes 55336035
SNP sites on vista25544[chr17:62985207-62985536]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 62985353 rs62073283 T G
SCRT2 TP73
4986914
chr17 62985387 rs62073284 T G no 4986915
chr17 62985398 rs35001236 A G
SCRT1
4986916
chr17 62985464 rs186466208 T C
POU1F1 POU3F2 YY1
4986917
Genes possibly regulated by vista25544[chr17:62985207-62985536]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 62850430 62915598 - LRRC37A3 ENSG00000176809.6 62915598 0.88 0.98 16164 30391
chr17 63006833 63052957 - GNA13 ENSG00000120063.5 63052957 0.72 0.99 16165 32579
Expression level of Genes
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miRNAs possibly regulated by vista25544[chr17:62985207-62985536]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results