EnhancerDB
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  3. vista25556[chr17:63119249-63119621]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25556[chr17:63119249-63119621]
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Tissue distribution of vista25556
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Transcription factor that possibly regulate vista25556[chr17:63119249-63119621]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 63118984 63119872 PHF8 UCSC Txn Factor no Conserved 108283426
chr17 63119066 63119893 POLR2A UCSC Txn Factor no Conserved 108283429
chr17 63119167 63119752 TAF1 UCSC Txn Factor no Conserved 108283440
chr17 63119185 63119694 GABPA UCSC Txn Factor no Conserved 108283442
chr17 63119352 63119742 TBP UCSC Txn Factor no Conserved 108283480
chr17 63119378 63119705 ZNF143 UCSC Txn Factor no Conserved 108283496
chr17 63119391 63119677 SP2 UCSC Txn Factor no Conserved 108283506
chr17 63119406 63119719 RUNX3 UCSC Txn Factor no Conserved 108283515
chr17 63119238 63119254 T JASPAR yes 21275869
chr17 63119238 63119254 T JASPAR yes 55351606
chr17 63119280 63119285 SP1 TRANSFAC yes 21275870
chr17 63119280 63119285 SP1 TRANSFAC yes 55351609
chr17 63119284 63119290 SP1 TRANSFAC yes 21275871
chr17 63119284 63119290 SP1 TRANSFAC yes 55351610
chr17 63119304 63119314 SP1 JASPAR yes 21275872
chr17 63119304 63119314 SP1 JASPAR yes 55351611
chr17 63119313 63119317 H1TF2 TRANSFAC yes 21275873
chr17 63119313 63119317 NFE TRANSFAC yes 21275874
chr17 63119313 63119317 SRF TRANSFAC yes 21275875
chr17 63119313 63119317 H1TF2 TRANSFAC yes 55351612
chr17 63119313 63119317 NFE TRANSFAC yes 55351613
chr17 63119313 63119317 SRF TRANSFAC yes 55351614
chr17 63119345 63119353 SMAD4 TRANSFAC yes 21275876
chr17 63119345 63119353 SMAD4 TRANSFAC yes 55351615
chr17 63119345 63119359 ZIC1 JASPAR yes 21275877
chr17 63119345 63119359 ZIC1 JASPAR yes 55351616
chr17 63119345 63119360 ZIC4 JASPAR yes 21275878
chr17 63119345 63119360 ZIC4 JASPAR yes 55351617
chr17 63119347 63119352 SP1 TRANSFAC yes 21275879
chr17 63119347 63119352 SP1 TRANSFAC yes 55351618
chr17 63119348 63119359 TFAP2A JASPAR yes 21275880
chr17 63119348 63119359 TFAP2A JASPAR yes 55351619
chr17 63119349 63119358 TFAP2A JASPAR yes 21275881
chr17 63119349 63119358 TFAP2A JASPAR yes 55351620
chr17 63119369 63119373 YY1 TRANSFAC yes 21275882
chr17 63119369 63119373 YY1 TRANSFAC yes 55351621
chr17 63119426 63119441 HSF1 JASPAR yes 21275883
chr17 63119426 63119441 HSF1 JASPAR yes 55351622
chr17 63119485 63119489 NFE TRANSFAC yes 21275884
chr17 63119485 63119489 NFE TRANSFAC yes 55351623
chr17 63119492 63119507 IRF9 JASPAR yes 21275885
chr17 63119492 63119507 IRF9 JASPAR yes 55351624
chr17 63119493 63119507 IRF7 JASPAR yes 21275886
chr17 63119493 63119507 IRF8 JASPAR yes 21275887
chr17 63119493 63119507 IRF7 JASPAR yes 55351625
chr17 63119493 63119507 IRF8 JASPAR yes 55351626
chr17 63119494 63119508 STAT1 JASPAR yes 21275888
chr17 63119494 63119508 STAT1 JASPAR yes 55351627
chr17 63119494 63119509 STAT2 JASPAR yes 21275889
chr17 63119494 63119509 STAT2 JASPAR yes 55351628
chr17 63119507 63119511 LFA1 TRANSFAC yes 21275890
chr17 63119507 63119511 LFA1 TRANSFAC yes 55351629
chr17 63119513 63119523 ELK1 JASPAR yes 21275891
chr17 63119513 63119523 ELK1 JASPAR yes 55351630
chr17 63119515 63119524 ELK4 JASPAR yes 21275892
chr17 63119515 63119524 ELK4 JASPAR yes 55351631
chr17 63119515 63119525 ELK1 JASPAR yes 21275893
chr17 63119515 63119525 ELK3 JASPAR yes 21275894
chr17 63119515 63119525 ERG JASPAR yes 21275895
chr17 63119515 63119525 ETS1 JASPAR yes 21275896
chr17 63119515 63119525 ETV1 JASPAR yes 21275897
chr17 63119515 63119525 ETV5 JASPAR yes 21275898
chr17 63119515 63119525 FLI1 JASPAR yes 21275899
chr17 63119515 63119525 GABPA JASPAR yes 21275900
chr17 63119515 63119525 ELK1 JASPAR yes 55351632
chr17 63119515 63119525 ELK3 JASPAR yes 55351633
chr17 63119515 63119525 ERG JASPAR yes 55351634
chr17 63119515 63119525 ETS1 JASPAR yes 55351635
chr17 63119515 63119525 ETV1 JASPAR yes 55351636
chr17 63119515 63119525 ETV5 JASPAR yes 55351637
chr17 63119515 63119525 FLI1 JASPAR yes 55351638
chr17 63119515 63119525 GABPA JASPAR yes 55351639
chr17 63119515 63119526 ELK4 JASPAR yes 21275901
chr17 63119515 63119526 FLI1 JASPAR yes 21275902
chr17 63119515 63119526 ELK4 JASPAR yes 55351640
chr17 63119515 63119526 FLI1 JASPAR yes 55351641
chr17 63119517 63119523 ETS1 JASPAR yes 21275903
chr17 63119517 63119523 SPI1 JASPAR yes 21275904
chr17 63119517 63119523 ETS1 JASPAR yes 55351642
chr17 63119517 63119523 SPI1 JASPAR yes 55351643
chr17 63119533 63119544 GCM1 JASPAR yes 21275905
chr17 63119533 63119544 GCM1 JASPAR yes 55351644
chr17 63119534 63119544 GCM2 JASPAR yes 21275906
chr17 63119534 63119544 GCM2 JASPAR yes 55351645
chr17 63119539 63119550 FLI1 JASPAR yes 21275907
chr17 63119539 63119550 FLI1 JASPAR yes 55351646
chr17 63119540 63119544 YY1 TRANSFAC yes 21275908
chr17 63119540 63119544 YY1 TRANSFAC yes 55351647
chr17 63119540 63119550 ETV6 JASPAR yes 21275909
chr17 63119540 63119550 ETV6 JASPAR yes 55351648
chr17 63119541 63119549 FEV JASPAR yes 21275910
chr17 63119541 63119549 FEV JASPAR yes 55351649
chr17 63119543 63119550 SPIB JASPAR yes 21275911
chr17 63119543 63119550 SPIB JASPAR yes 55351650
chr17 63119544 63119561 BCL6B JASPAR yes 21275912
chr17 63119544 63119561 BCL6B JASPAR yes 55351651
chr17 63119547 63119558 STAT1 JASPAR yes 21275913
chr17 63119547 63119558 STAT1 JASPAR yes 55351652
chr17 63119565 63119571 ETS1 JASPAR yes 21275914
chr17 63119565 63119571 ETS1 JASPAR yes 55351653
chr17 63119599 63119614 RUNX2 JASPAR yes 21275915
chr17 63119599 63119614 RUNX2 JASPAR yes 55351654
chr17 63119617 63119632 PRDM1 JASPAR yes 21275916
chr17 63119617 63119632 STAT2 JASPAR yes 21275917
chr17 63119617 63119632 PRDM1 JASPAR yes 55351655
chr17 63119617 63119632 STAT2 JASPAR yes 55351656
chr17 63119621 63119626 ETS2 TRANSFAC yes 21275918
chr17 63119621 63119626 ETS2 TRANSFAC yes 55351657
SNP sites on vista25556[chr17:63119249-63119621]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 63119263 rs149071254 G T
GABPA PHF8 POLR2A TAF1
4988435
chr17 63119402 rs116385136 C T
GABPA PHF8 POLR2A SP2 TAF1 TBP ZNF143
4988436
chr17 63119449 rs146857342 G T
GABPA PHF8 POLR2A RUNX3 SP2 TAF1 TBP ZNF143
4988437
chr17 63119459 rs9898861 C G
GABPA PHF8 POLR2A RUNX3 SP2 TAF1 TBP ZNF143
4988438
chr17 63119488 rs9899243 G A,T
GABPA NFE PHF8 POLR2A RUNX3 SP2 TAF1 TBP ZNF143
4988439
chr17 63119513 rs553778084 A G
ELK1 GABPA PHF8 POLR2A RUNX3 SP2 TAF1 TBP ZNF143
4988440
chr17 63119530 rs9898914 C G,T
GABPA PHF8 POLR2A RUNX3 SP2 TAF1 TBP ZNF143
4988441
chr17 63119590 rs299840 G C
GABPA PHF8 POLR2A RUNX3 SP2 TAF1 TBP ZNF143
4988442
Genes possibly regulated by vista25556[chr17:63119249-63119621]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 63006833 63052957 - GNA13 ENSG00000120063.5 63052957 0.72 0.99 16165 33708
chr17 63133549 63223821 + RGS9 ENSG00000108370.11 63133549 0.85 1.0 16166 86072
Expression level of Genes
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miRNAs possibly regulated by vista25556[chr17:63119249-63119621]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results