EnhancerDB
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  3. vista25560[chr17:63175905-63176048]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25560[chr17:63175905-63176048]
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Tissue distribution of vista25560
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Transcription factor that possibly regulate vista25560[chr17:63175905-63176048]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 63175904 63175908 NFE TRANSFAC yes 21276057
chr17 63175904 63175908 NFE TRANSFAC yes 55354048
chr17 63175904 63175919 FOXP1 JASPAR yes 21276058
chr17 63175904 63175919 FOXP1 JASPAR yes 55354049
chr17 63175925 63175931 SOX10 JASPAR yes 21276059
chr17 63175925 63175931 SOX10 JASPAR yes 55354050
chr17 63175929 63175944 HNF4A JASPAR yes 21276060
chr17 63175929 63175944 HNF4A JASPAR yes 55354051
chr17 63175935 63175942 E2F1 TRANSFAC yes 21276061
chr17 63175935 63175942 E2F1 TRANSFAC yes 55354052
chr17 63175950 63175961 ELK4 JASPAR yes 21276062
chr17 63175950 63175961 FLI1 JASPAR yes 21276063
chr17 63175950 63175961 ELK4 JASPAR yes 55354053
chr17 63175950 63175961 FLI1 JASPAR yes 55354054
chr17 63175951 63175961 ERF JASPAR yes 21276064
chr17 63175951 63175961 ETS1 JASPAR yes 21276065
chr17 63175951 63175961 ETV6 JASPAR yes 21276066
chr17 63175951 63175961 GABPA JASPAR yes 21276067
chr17 63175951 63175961 ERF JASPAR yes 55354055
chr17 63175951 63175961 ETS1 JASPAR yes 55354056
chr17 63175951 63175961 ETV6 JASPAR yes 55354057
chr17 63175951 63175961 GABPA JASPAR yes 55354058
chr17 63175951 63175964 ELF1 JASPAR yes 21276068
chr17 63175951 63175964 ELF1 JASPAR yes 55354059
chr17 63175952 63175959 SPI1 JASPAR yes 21276069
chr17 63175952 63175959 SPI1 JASPAR yes 55354060
chr17 63175952 63175960 EHF JASPAR yes 21276070
chr17 63175952 63175960 FEV JASPAR yes 21276071
chr17 63175952 63175960 EHF JASPAR yes 55354061
chr17 63175952 63175960 FEV JASPAR yes 55354062
chr17 63175965 63175971 ZNF354C JASPAR yes 21276072
chr17 63175965 63175971 ZNF354C JASPAR yes 55354063
chr17 63176001 63176005 LFA1 TRANSFAC yes 21276073
chr17 63176001 63176005 LFA1 TRANSFAC yes 55354064
chr17 63176039 63176044 SP1 TRANSFAC yes 21276074
chr17 63176039 63176044 SP1 TRANSFAC yes 55354065
chr17 63176042 63176052 TBX21 JASPAR yes 21276075
chr17 63176042 63176052 TBX21 JASPAR yes 55354066
chr17 63176042 63176053 TBX20 JASPAR yes 21276076
chr17 63176042 63176053 TBX2 JASPAR yes 21276077
chr17 63176042 63176053 TBX20 JASPAR yes 55354067
chr17 63176042 63176053 TBX2 JASPAR yes 55354068
chr17 63176042 63176055 EOMES JASPAR yes 21276078
chr17 63176042 63176055 EOMES JASPAR yes 55354069
chr17 63176043 63176051 MGA JASPAR yes 21276079
chr17 63176043 63176051 TBX15 JASPAR yes 21276080
chr17 63176043 63176051 TBX1 JASPAR yes 21276081
chr17 63176043 63176051 TBX4 JASPAR yes 21276082
chr17 63176043 63176051 TBX5 JASPAR yes 21276083
chr17 63176043 63176051 MGA JASPAR yes 55354070
chr17 63176043 63176051 TBX15 JASPAR yes 55354071
chr17 63176043 63176051 TBX1 JASPAR yes 55354072
chr17 63176043 63176051 TBX4 JASPAR yes 55354073
chr17 63176043 63176051 TBX5 JASPAR yes 55354074
chr17 63176043 63176053 TBR1 JASPAR yes 21276084
chr17 63176043 63176053 TBR1 JASPAR yes 55354075
SNP sites on vista25560[chr17:63175905-63176048]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 63176018 rs182901224 C T no 4988885
chr17 63176041 rs565077602 G A
SP1
4988886
Genes possibly regulated by vista25560[chr17:63175905-63176048]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 63133549 63223821 + RGS9 ENSG00000108370.11 63133549 0.85 1.0 16166 57644
Expression level of Genes
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miRNAs possibly regulated by vista25560[chr17:63175905-63176048]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results