EnhancerDB
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  3. vista25561[chr17:63179961-63180187]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25561[chr17:63179961-63180187]
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Tissue distribution of vista25561
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Transcription factor that possibly regulate vista25561[chr17:63179961-63180187]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 63179927 63180143 FOXA1 UCSC Txn Factor no Conserved 108283656
chr17 63179929 63180173 SRF UCSC Txn Factor no Conserved 108283657
chr17 63179997 63180190 TEAD4 UCSC Txn Factor no Conserved 108283662
chr17 63179964 63179974 NFIA JASPAR yes 21276085
chr17 63179964 63179974 NFIA JASPAR yes 55354685
chr17 63179966 63179972 NFIC JASPAR yes 21276086
chr17 63179966 63179972 NFIC JASPAR yes 55354686
chr17 63179968 63179972 H1TF2 TRANSFAC yes 21276087
chr17 63179968 63179972 NFE TRANSFAC yes 21276088
chr17 63179968 63179972 SRF TRANSFAC yes 21276089
chr17 63179968 63179972 H1TF2 TRANSFAC yes 55354687
chr17 63179968 63179972 NFE TRANSFAC yes 55354688
chr17 63179968 63179972 SRF TRANSFAC yes 55354689
chr17 63179998 63180016 ESR1 JASPAR yes 21276090
chr17 63179998 63180016 ESR1 JASPAR yes 55354690
chr17 63180017 63180032 FOXP1 JASPAR yes 21276091
chr17 63180017 63180032 FOXP1 JASPAR yes 55354691
chr17 63180018 63180029 FOXA1 JASPAR yes 21276092
chr17 63180018 63180029 FOXA1 JASPAR yes 55354692
chr17 63180018 63180033 FOXA1 JASPAR yes 21276093
chr17 63180018 63180033 FOXA1 JASPAR yes 55354693
chr17 63180019 63180027 FOXL1 JASPAR yes 21276094
chr17 63180019 63180027 FOXL1 JASPAR yes 55354694
chr17 63180019 63180030 FOXB1 JASPAR yes 21276095
chr17 63180019 63180030 FOXC1 JASPAR yes 21276096
chr17 63180019 63180030 FOXB1 JASPAR yes 55354695
chr17 63180019 63180030 FOXC1 JASPAR yes 55354696
chr17 63180019 63180031 FOXC2 JASPAR yes 21276097
chr17 63180019 63180031 FOXC2 JASPAR yes 55354697
chr17 63180020 63180031 FOXP2 JASPAR yes 21276098
chr17 63180020 63180031 FOXP2 JASPAR yes 55354698
chr17 63180021 63180029 FOXO3 JASPAR yes 21276099
chr17 63180021 63180029 FOXO3 JASPAR yes 55354699
chr17 63180022 63180029 FOXD2 JASPAR yes 21276100
chr17 63180022 63180029 FOXI1 JASPAR yes 21276101
chr17 63180022 63180029 FOXL1 JASPAR yes 21276102
chr17 63180022 63180029 FOXO4 JASPAR yes 21276103
chr17 63180022 63180029 FOXO6 JASPAR yes 21276104
chr17 63180022 63180029 FOXP3 JASPAR yes 21276105
chr17 63180022 63180029 FOXD2 JASPAR yes 55354700
chr17 63180022 63180029 FOXI1 JASPAR yes 55354701
chr17 63180022 63180029 FOXL1 JASPAR yes 55354702
chr17 63180022 63180029 FOXO4 JASPAR yes 55354703
chr17 63180022 63180029 FOXO6 JASPAR yes 55354704
chr17 63180022 63180029 FOXP3 JASPAR yes 55354705
chr17 63180022 63180030 FOXD1 JASPAR yes 21276106
chr17 63180022 63180030 FOXG1 JASPAR yes 21276107
chr17 63180022 63180030 FOXO3 JASPAR yes 21276108
chr17 63180022 63180030 FOXD1 JASPAR yes 55354706
chr17 63180022 63180030 FOXG1 JASPAR yes 55354707
chr17 63180022 63180030 FOXO3 JASPAR yes 55354708
chr17 63180029 63180049 TP53 JASPAR yes 21276109
chr17 63180029 63180049 TP53 JASPAR yes 55354709
chr17 63180040 63180058 SRF JASPAR yes 21276110
chr17 63180040 63180058 SRF JASPAR yes 55354710
chr17 63180042 63180058 SRF JASPAR yes 21276111
chr17 63180042 63180058 SRF JASPAR yes 55354711
chr17 63180042 63180060 SRF JASPAR yes 21276112
chr17 63180042 63180060 SRF JASPAR yes 55354712
chr17 63180043 63180055 SRF JASPAR yes 21276113
chr17 63180043 63180055 SRF JASPAR yes 55354713
chr17 63180048 63180052 YY1 TRANSFAC yes 21276114
chr17 63180048 63180052 YY1 TRANSFAC yes 55354714
chr17 63180053 63180057 LFA1 TRANSFAC yes 21276115
chr17 63180053 63180057 LFA1 TRANSFAC yes 55354715
chr17 63180070 63180084 SPI1 JASPAR yes 21276116
chr17 63180070 63180084 SPI1 JASPAR yes 55354716
chr17 63180092 63180104 TEAD1 JASPAR yes 21276117
chr17 63180092 63180104 TEAD1 JASPAR yes 55354717
chr17 63180111 63180121 RELA JASPAR yes 21276118
chr17 63180111 63180121 REL JASPAR yes 21276119
chr17 63180111 63180121 RELA JASPAR yes 55354718
chr17 63180111 63180121 REL JASPAR yes 55354719
chr17 63180117 63180122 ETS2 TRANSFAC yes 21276120
chr17 63180117 63180122 ETS2 TRANSFAC yes 55354720
chr17 63180161 63180172 NFE2 JASPAR yes 21276121
chr17 63180161 63180172 NFE2 JASPAR yes 55354721
chr17 63180183 63180198 ZIC3 JASPAR yes 21276122
chr17 63180183 63180198 ZIC3 JASPAR yes 55354722
SNP sites on vista25561[chr17:63179961-63180187]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 63179988 rs71379925 A G
FOXA1 SRF
4988956
chr17 63179989 rs144499931 T C
FOXA1 SRF
4988957
chr17 63180009 rs117842777 C T
ESR1 FOXA1 SRF TEAD4
4988958
chr17 63180010 rs7208808 G A,T
ESR1 FOXA1 SRF TEAD4
4988959
chr17 63180163 rs9916501 A C
NFE2 SRF TEAD4
4988960
Genes possibly regulated by vista25561[chr17:63179961-63180187]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 63133549 63223821 + RGS9 ENSG00000108370.11 63133549 0.85 1.0 16166 53588
Expression level of Genes
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miRNAs possibly regulated by vista25561[chr17:63179961-63180187]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results