EnhancerDB
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  3. vista25567[chr17:63550809-63551200]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25567[chr17:63550809-63551200]
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Tissue distribution of vista25567
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Transcription factor that possibly regulate vista25567[chr17:63550809-63551200]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 63550578 63551022 CTCF UCSC Txn Factor no Conserved 108283890
chr17 63550798 63550817 CTCF JASPAR yes 21276305
chr17 63550798 63550817 CTCF JASPAR yes 55380100
chr17 63550807 63550826 CTCF JASPAR yes 21276306
chr17 63550807 63550826 CTCF JASPAR yes 55380101
chr17 63550809 63550821 TAL1 JASPAR yes 21276307
chr17 63550809 63550821 TAL1 JASPAR yes 55380102
chr17 63550811 63550817 YY1 JASPAR yes 21276308
chr17 63550811 63550817 YY1 JASPAR yes 55380103
chr17 63550837 63550858 ZNF263 JASPAR yes 21276309
chr17 63550837 63550858 ZNF263 JASPAR yes 55380104
chr17 63550854 63550868 PLAG1 JASPAR yes 21276310
chr17 63550854 63550868 PLAG1 JASPAR yes 55380105
chr17 63550854 63550870 NFYA JASPAR yes 21276311
chr17 63550854 63550870 NFYA JASPAR yes 55380106
chr17 63550857 63550872 ZIC3 JASPAR yes 21276312
chr17 63550857 63550872 ZIC4 JASPAR yes 21276313
chr17 63550857 63550872 ZIC3 JASPAR yes 55380107
chr17 63550857 63550872 ZIC4 JASPAR yes 55380108
chr17 63550858 63550872 ZIC1 JASPAR yes 21276314
chr17 63550858 63550872 ZIC1 JASPAR yes 55380109
chr17 63550859 63550863 H1TF2 TRANSFAC yes 21276315
chr17 63550859 63550863 NFE TRANSFAC yes 21276316
chr17 63550859 63550863 SRF TRANSFAC yes 21276317
chr17 63550859 63550863 H1TF2 TRANSFAC yes 55380110
chr17 63550859 63550863 NFE TRANSFAC yes 55380111
chr17 63550859 63550863 SRF TRANSFAC yes 55380112
chr17 63550876 63550897 REST JASPAR yes 21276318
chr17 63550876 63550897 REST JASPAR yes 55380113
chr17 63550887 63550891 LFA1 TRANSFAC yes 21276319
chr17 63550887 63550891 LFA1 TRANSFAC yes 55380114
chr17 63550929 63550935 MAZ TRANSFAC yes 21276320
chr17 63550929 63550935 MAZ TRANSFAC yes 55380115
chr17 63550939 63550953 MTF1 JASPAR yes 21276321
chr17 63550939 63550953 MTF1 JASPAR yes 55380116
chr17 63550962 63550977 MEF2C JASPAR yes 21276322
chr17 63550962 63550977 MEF2C JASPAR yes 55380117
chr17 63550963 63550969 MZF1 JASPAR yes 21276323
chr17 63550963 63550969 MZF1 JASPAR yes 55380118
chr17 63550991 63550995 H1TF2 TRANSFAC yes 21276324
chr17 63550991 63550995 NFE TRANSFAC yes 21276325
chr17 63550991 63550995 SRF TRANSFAC yes 21276326
chr17 63550991 63550995 H1TF2 TRANSFAC yes 55380119
chr17 63550991 63550995 NFE TRANSFAC yes 55380120
chr17 63550991 63550995 SRF TRANSFAC yes 55380121
chr17 63550993 63551008 RUNX2 JASPAR yes 21276327
chr17 63550993 63551008 RUNX2 JASPAR yes 55380122
chr17 63550995 63551009 PLAG1 JASPAR yes 21276328
chr17 63550995 63551009 PLAG1 JASPAR yes 55380123
chr17 63551004 63551018 PLAG1 JASPAR yes 21276329
chr17 63551004 63551018 PLAG1 JASPAR yes 55380124
chr17 63551014 63551022 TBX5 JASPAR yes 21276330
chr17 63551014 63551022 TBX5 JASPAR yes 55380125
chr17 63551053 63551063 NFKB1 JASPAR yes 21276331
chr17 63551053 63551063 NFKB1 JASPAR yes 55380126
chr17 63551060 63551070 CLOCK JASPAR yes 21276332
chr17 63551060 63551070 MAX JASPAR yes 21276333
chr17 63551060 63551070 MLXIPL JASPAR yes 21276334
chr17 63551060 63551070 MNT JASPAR yes 21276335
chr17 63551060 63551070 CLOCK JASPAR yes 55380127
chr17 63551060 63551070 MAX JASPAR yes 55380128
chr17 63551060 63551070 MLXIPL JASPAR yes 55380129
chr17 63551060 63551070 MNT JASPAR yes 55380130
chr17 63551061 63551071 MAX JASPAR yes 21276336
chr17 63551061 63551071 MAX JASPAR yes 55380131
chr17 63551062 63551067 MYC TRANSFAC yes 21276337
chr17 63551062 63551067 USF1 TRANSFAC yes 21276338
chr17 63551062 63551067 USF2 TRANSFAC yes 21276339
chr17 63551062 63551067 MYC TRANSFAC yes 55380132
chr17 63551062 63551067 USF1 TRANSFAC yes 55380133
chr17 63551062 63551067 USF2 TRANSFAC yes 55380134
chr17 63551062 63551070 USF1 TRANSFAC yes 21276340
chr17 63551062 63551070 USF1 TRANSFAC yes 55380135
chr17 63551072 63551085 SCRT2 JASPAR yes 21276341
chr17 63551072 63551085 SCRT2 JASPAR yes 55380136
chr17 63551072 63551087 SCRT1 JASPAR yes 21276342
chr17 63551072 63551087 SCRT1 JASPAR yes 55380137
chr17 63551095 63551110 MEF2A JASPAR yes 21276343
chr17 63551095 63551110 MEF2A JASPAR yes 55380138
chr17 63551096 63551108 FOXI1 JASPAR yes 21276344
chr17 63551096 63551108 FOXI1 JASPAR yes 55380139
chr17 63551096 63551111 MEF2C JASPAR yes 21276345
chr17 63551096 63551111 MEF2C JASPAR yes 55380140
chr17 63551097 63551109 MEF2A JASPAR yes 21276346
chr17 63551097 63551109 MEF2B JASPAR yes 21276347
chr17 63551097 63551109 MEF2D JASPAR yes 21276348
chr17 63551097 63551109 MEF2A JASPAR yes 55380141
chr17 63551097 63551109 MEF2B JASPAR yes 55380142
chr17 63551097 63551109 MEF2D JASPAR yes 55380143
chr17 63551098 63551108 MEF2A JASPAR yes 21276349
chr17 63551098 63551108 MEF2A JASPAR yes 55380144
chr17 63551099 63551103 YY1 TRANSFAC yes 21276350
chr17 63551099 63551103 YY1 TRANSFAC yes 55380145
chr17 63551116 63551136 TP53 JASPAR yes 21276351
chr17 63551116 63551136 TP53 JASPAR yes 55380146
chr17 63551128 63551138 MZF1 JASPAR yes 21276352
chr17 63551128 63551138 MZF1 JASPAR yes 55380147
chr17 63551128 63551148 RREB1 JASPAR yes 21276353
chr17 63551128 63551148 RREB1 JASPAR yes 55380148
chr17 63551131 63551145 PLAG1 JASPAR yes 21276354
chr17 63551131 63551145 PLAG1 JASPAR yes 55380149
chr17 63551143 63551158 HNF4G JASPAR yes 21276355
chr17 63551143 63551158 HNF4G JASPAR yes 55380150
chr17 63551144 63551159 HNF4A JASPAR yes 21276356
chr17 63551144 63551159 HNF4A JASPAR yes 55380151
chr17 63551167 63551172 GATA2 JASPAR yes 21276357
chr17 63551167 63551172 GATA2 JASPAR yes 55380152
chr17 63551179 63551189 GABPA JASPAR yes 21276358
chr17 63551179 63551189 GABPA JASPAR yes 55380153
chr17 63551181 63551187 ETS1 JASPAR yes 21276359
chr17 63551181 63551187 SPI1 JASPAR yes 21276360
chr17 63551181 63551187 ETS1 JASPAR yes 55380154
chr17 63551181 63551187 SPI1 JASPAR yes 55380155
chr17 63551184 63551189 SP1 TRANSFAC yes 21276361
chr17 63551184 63551189 SP1 TRANSFAC yes 55380156
chr17 63551184 63551190 SP1 TRANSFAC yes 21276362
chr17 63551184 63551190 SP1 TRANSFAC yes 55380157
chr17 63551190 63551205 MEF2A JASPAR yes 21276363
chr17 63551190 63551205 MEF2A JASPAR yes 55380158
chr17 63551191 63551206 MEF2C JASPAR yes 21276364
chr17 63551191 63551206 MEF2C JASPAR yes 55380159
chr17 63551192 63551204 FOXC2 JASPAR yes 21276365
chr17 63551192 63551204 MEF2A JASPAR yes 21276366
chr17 63551192 63551204 MEF2B JASPAR yes 21276367
chr17 63551192 63551204 MEF2D JASPAR yes 21276368
chr17 63551192 63551204 FOXC2 JASPAR yes 55380160
chr17 63551192 63551204 MEF2A JASPAR yes 55380161
chr17 63551192 63551204 MEF2B JASPAR yes 55380162
chr17 63551192 63551204 MEF2D JASPAR yes 55380163
chr17 63551193 63551203 MEF2A JASPAR yes 21276369
chr17 63551193 63551203 MEF2A JASPAR yes 55380164
chr17 63551193 63551204 FOXB1 JASPAR yes 21276370
chr17 63551193 63551204 FOXC1 JASPAR yes 21276371
chr17 63551193 63551204 FOXB1 JASPAR yes 55380165
chr17 63551193 63551204 FOXC1 JASPAR yes 55380166
chr17 63551194 63551198 YY1 TRANSFAC yes 21276372
chr17 63551194 63551198 YY1 TRANSFAC yes 55380167
SNP sites on vista25567[chr17:63550809-63551200]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 63550946 rs72856680 C T
CTCF MTF1
4992312
chr17 63551053 rs191451193 G A
NFKB1
4992313
Genes possibly regulated by vista25567[chr17:63550809-63551200]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 63524681 63557765 - AXIN2 ENSG00000168646.8 63557765 0.85 0.92 16167 93435
chr17 63534220 63637151 - CTD-2535L24.2 ENSG00000266076.1 63637151 0.88 0.95 16168 14049
Expression level of Genes
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miRNAs possibly regulated by vista25567[chr17:63550809-63551200]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results