EnhancerDB
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  3. vista25588[chr17:64370414-64370595]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25588[chr17:64370414-64370595]
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Tissue distribution of vista25588
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Transcription factor that possibly regulate vista25588[chr17:64370414-64370595]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 64369948 64370504 ZNF263 UCSC Txn Factor no Conserved 108284335
chr17 64370419 64370829 GATA2 UCSC Txn Factor no Conserved 108284338
chr17 64370413 64370422 NKX3-2 JASPAR yes 21277126
chr17 64370413 64370422 NKX3-2 JASPAR yes 55426286
chr17 64370429 64370444 RUNX2 JASPAR yes 21277127
chr17 64370429 64370444 RUNX2 JASPAR yes 55426287
chr17 64370430 64370434 NFE TRANSFAC yes 21277128
chr17 64370430 64370434 NFE TRANSFAC yes 55426288
chr17 64370451 64370456 SP1 TRANSFAC yes 21277129
chr17 64370451 64370456 SP1 TRANSFAC yes 55426289
chr17 64370465 64370475 NFKB1 JASPAR yes 21277130
chr17 64370465 64370475 NFKB1 JASPAR yes 55426290
chr17 64370471 64370481 MZF1 JASPAR yes 21277131
chr17 64370471 64370481 MZF1 JASPAR yes 55426291
chr17 64370499 64370510 GCM1 JASPAR yes 21277132
chr17 64370499 64370510 GCM1 JASPAR yes 55426292
chr17 64370500 64370510 GCM2 JASPAR yes 21277133
chr17 64370500 64370510 GCM2 JASPAR yes 55426293
chr17 64370508 64370527 REST JASPAR yes 21277134
chr17 64370508 64370527 REST JASPAR yes 55426294
chr17 64370514 64370533 REST JASPAR yes 21277135
chr17 64370514 64370533 REST JASPAR yes 55426295
chr17 64370529 64370533 NFE TRANSFAC yes 21277136
chr17 64370529 64370533 NFE TRANSFAC yes 55426296
chr17 64370531 64370541 RORA JASPAR yes 21277137
chr17 64370531 64370541 RORA JASPAR yes 55426297
chr17 64370532 64370543 ESRRA JASPAR yes 21277138
chr17 64370532 64370543 ESRRB JASPAR yes 21277139
chr17 64370532 64370543 ESRRA JASPAR yes 55426298
chr17 64370532 64370543 ESRRB JASPAR yes 55426299
chr17 64370532 64370545 NR2F1 JASPAR yes 21277140
chr17 64370532 64370545 NR2F1 JASPAR yes 55426300
chr17 64370534 64370542 NR4A2 JASPAR yes 21277141
chr17 64370534 64370542 NR4A2 JASPAR yes 55426301
chr17 64370535 64370552 RARA JASPAR yes 21277142
chr17 64370535 64370552 RXRA JASPAR yes 21277143
chr17 64370535 64370552 RARA JASPAR yes 55426302
chr17 64370535 64370552 RXRA JASPAR yes 55426303
chr17 64370536 64370540 ESR1 TRANSFAC yes 21277144
chr17 64370536 64370540 ESR1 TRANSFAC yes 55426304
chr17 64370584 64370598 BATF3 JASPAR yes 21277145
chr17 64370584 64370598 BATF3 JASPAR yes 55426305
chr17 64370585 64370600 JUND JASPAR yes 21277146
chr17 64370585 64370600 JUND JASPAR yes 55426306
chr17 64370586 64370599 JUN JASPAR yes 21277147
chr17 64370586 64370599 JUN JASPAR yes 55426307
chr17 64370586 64370605 RFX2 JASPAR yes 21277148
chr17 64370586 64370605 RFX2 JASPAR yes 55426308
chr17 64370587 64370595 CREB1 JASPAR yes 21277149
chr17 64370587 64370595 CREB1 JASPAR yes 55426309
chr17 64370588 64370600 CREB1 JASPAR yes 21277150
chr17 64370588 64370600 CREB1 JASPAR yes 55426310
chr17 64370590 64370606 RFX2 JASPAR yes 21277151
chr17 64370590 64370606 RFX3 JASPAR yes 21277152
chr17 64370590 64370606 RFX4 JASPAR yes 21277153
chr17 64370590 64370606 RFX5 JASPAR yes 21277154
chr17 64370590 64370606 RFX2 JASPAR yes 55426311
chr17 64370590 64370606 RFX3 JASPAR yes 55426312
chr17 64370590 64370606 RFX4 JASPAR yes 55426313
chr17 64370590 64370606 RFX5 JASPAR yes 55426314
chr17 64370591 64370610 RFX2 JASPAR yes 21277155
chr17 64370591 64370610 RFX2 JASPAR yes 55426315
SNP sites on vista25588[chr17:64370414-64370595]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 64370544 rs72846682 C A,T
GATA2 NR2F1 RARA RXRA
4996750
chr17 64370592 rs138060497 G A
BATF3 CREB1 GATA2 JUN JUND RFX2 RFX3 RFX4 RFX5
4996751
Genes possibly regulated by vista25588[chr17:64370414-64370595]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 64298754 64806861 + PRKCA ENSG00000154229.7 64298754 0.73 0.99 16171 28340
Expression level of Genes
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miRNAs possibly regulated by vista25588[chr17:64370414-64370595]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results