EnhancerDB
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  3. vista25589[chr17:64380133-64380302]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25589[chr17:64380133-64380302]
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Tissue distribution of vista25589
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Transcription factor that possibly regulate vista25589[chr17:64380133-64380302]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 64380134 64380152 IRF2 JASPAR yes 21277156
chr17 64380134 64380152 IRF2 JASPAR yes 55427933
chr17 64380141 64380162 IRF1 JASPAR yes 21277157
chr17 64380141 64380162 IRF1 JASPAR yes 55427934
chr17 64380152 64380156 YY1 TRANSFAC yes 21277158
chr17 64380152 64380156 YY1 TRANSFAC yes 55427935
chr17 64380155 64380165 HOXA13 JASPAR yes 21277159
chr17 64380155 64380165 HOXB13 JASPAR yes 21277160
chr17 64380155 64380165 HOXC10 JASPAR yes 21277161
chr17 64380155 64380165 HOXD11 JASPAR yes 21277162
chr17 64380155 64380165 HOXD13 JASPAR yes 21277163
chr17 64380155 64380165 HOXA13 JASPAR yes 55427936
chr17 64380155 64380165 HOXB13 JASPAR yes 55427937
chr17 64380155 64380165 HOXC10 JASPAR yes 55427938
chr17 64380155 64380165 HOXD11 JASPAR yes 55427939
chr17 64380155 64380165 HOXD13 JASPAR yes 55427940
chr17 64380155 64380166 HOXA10 JASPAR yes 21277164
chr17 64380155 64380166 HOXC11 JASPAR yes 21277165
chr17 64380155 64380166 HOXC12 JASPAR yes 21277166
chr17 64380155 64380166 HOXC13 JASPAR yes 21277167
chr17 64380155 64380166 HOXD12 JASPAR yes 21277168
chr17 64380155 64380166 HOXA10 JASPAR yes 55427941
chr17 64380155 64380166 HOXC11 JASPAR yes 55427942
chr17 64380155 64380166 HOXC12 JASPAR yes 55427943
chr17 64380155 64380166 HOXC13 JASPAR yes 55427944
chr17 64380155 64380166 HOXD12 JASPAR yes 55427945
chr17 64380156 64380165 CDX1 JASPAR yes 21277169
chr17 64380156 64380165 CDX1 JASPAR yes 55427946
chr17 64380156 64380167 CDX2 JASPAR yes 21277170
chr17 64380156 64380167 CDX2 JASPAR yes 55427947
chr17 64380163 64380175 FOXI1 JASPAR yes 21277171
chr17 64380163 64380175 FOXI1 JASPAR yes 55427948
chr17 64380166 64380170 YY1 TRANSFAC yes 21277172
chr17 64380166 64380170 YY1 TRANSFAC yes 55427949
chr17 64380170 64380181 FOXH1 JASPAR yes 21277173
chr17 64380170 64380181 FOXH1 JASPAR yes 55427950
chr17 64380174 64380178 YY1 TRANSFAC yes 21277174
chr17 64380174 64380178 YY1 TRANSFAC yes 55427951
chr17 64380175 64380185 HOXB13 JASPAR yes 21277175
chr17 64380175 64380185 HOXD13 JASPAR yes 21277176
chr17 64380175 64380185 HOXB13 JASPAR yes 55427952
chr17 64380175 64380185 HOXD13 JASPAR yes 55427953
chr17 64380176 64380186 GSX1 JASPAR yes 21277177
chr17 64380176 64380186 GSX2 JASPAR yes 21277178
chr17 64380176 64380186 GSX1 JASPAR yes 55427954
chr17 64380176 64380186 GSX2 JASPAR yes 55427955
chr17 64380177 64380185 BSX JASPAR yes 21277179
chr17 64380177 64380185 BSX JASPAR yes 55427956
chr17 64380179 64380199 PPARG JASPAR yes 21277180
chr17 64380179 64380199 PPARG JASPAR yes 55427957
chr17 64380183 64380187 LFA1 TRANSFAC yes 21277181
chr17 64380183 64380187 LFA1 TRANSFAC yes 55427958
chr17 64380201 64380205 YY1 TRANSFAC yes 21277182
chr17 64380201 64380205 YY1 TRANSFAC yes 55427959
chr17 64380218 64380229 FOXB1 JASPAR yes 21277183
chr17 64380218 64380229 FOXB1 JASPAR yes 55427960
chr17 64380219 64380227 FOXL1 JASPAR yes 21277184
chr17 64380219 64380227 FOXL1 JASPAR yes 55427961
chr17 64380219 64380230 FOXB1 JASPAR yes 21277185
chr17 64380219 64380230 FOXB1 JASPAR yes 55427962
chr17 64380221 64380229 FOXL1 JASPAR yes 21277186
chr17 64380221 64380229 FOXL1 JASPAR yes 55427963
chr17 64380240 64380248 TEAD3 JASPAR yes 21277187
chr17 64380240 64380248 TEAD3 JASPAR yes 55427964
chr17 64380258 64380274 POU4F2 JASPAR yes 21277188
chr17 64380258 64380274 POU4F3 JASPAR yes 21277189
chr17 64380258 64380274 POU4F2 JASPAR yes 55427965
chr17 64380258 64380274 POU4F3 JASPAR yes 55427966
chr17 64380260 64380274 POU4F1 JASPAR yes 21277190
chr17 64380260 64380274 POU4F1 JASPAR yes 55427967
chr17 64380261 64380273 HNF1B JASPAR yes 21277191
chr17 64380261 64380273 HNF1B JASPAR yes 55427968
chr17 64380274 64380292 RARA JASPAR yes 21277192
chr17 64380274 64380292 RARA JASPAR yes 55427969
chr17 64380284 64380293 THAP1 JASPAR yes 21277193
chr17 64380284 64380293 THAP1 JASPAR yes 55427970
chr17 64380297 64380315 RARA JASPAR yes 21277194
chr17 64380297 64380315 RARA JASPAR yes 55427971
SNP sites on vista25589[chr17:64380133-64380302]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 64380274 rs7225452 C T
POU4F1 POU4F2 POU4F3 RARA
4996884
chr17 64380301 rs149364077 G A
RARA
4996885
Genes possibly regulated by vista25589[chr17:64380133-64380302]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 64298754 64806861 + PRKCA ENSG00000154229.7 64298754 0.73 0.99 16171 18621
Expression level of Genes
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miRNAs possibly regulated by vista25589[chr17:64380133-64380302]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results