EnhancerDB
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  3. vista25631[chr17:65258633-65258801]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25631[chr17:65258633-65258801]
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Tissue distribution of vista25631
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Transcription factor that possibly regulate vista25631[chr17:65258633-65258801]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 65258648 65258660 TAL1 JASPAR yes 21279010
chr17 65258648 65258660 TAL1 JASPAR yes 55489598
chr17 65258648 65258661 ZBTB18 JASPAR yes 21279011
chr17 65258648 65258661 ZBTB18 JASPAR yes 55489599
chr17 65258650 65258660 MSC JASPAR yes 21279012
chr17 65258650 65258660 MYF6 JASPAR yes 21279013
chr17 65258650 65258660 TFAP4 JASPAR yes 21279014
chr17 65258650 65258660 MSC JASPAR yes 55489600
chr17 65258650 65258660 MYF6 JASPAR yes 55489601
chr17 65258650 65258660 TFAP4 JASPAR yes 55489602
chr17 65258650 65258662 TAL1 JASPAR yes 21279015
chr17 65258650 65258662 TAL1 JASPAR yes 55489603
chr17 65258653 65258665 FOXI1 JASPAR yes 21279016
chr17 65258653 65258665 FOXI1 JASPAR yes 55489604
chr17 65258654 65258665 FOXP2 JASPAR yes 21279017
chr17 65258654 65258665 FOXP2 JASPAR yes 55489605
chr17 65258656 65258666 HOXA13 JASPAR yes 21279018
chr17 65258656 65258666 HOXB13 JASPAR yes 21279019
chr17 65258656 65258666 HOXD13 JASPAR yes 21279020
chr17 65258656 65258666 HOXA13 JASPAR yes 55489606
chr17 65258656 65258666 HOXB13 JASPAR yes 55489607
chr17 65258656 65258666 HOXD13 JASPAR yes 55489608
chr17 65258656 65258667 FOXH1 JASPAR yes 21279021
chr17 65258656 65258667 HOXA10 JASPAR yes 21279022
chr17 65258656 65258667 FOXH1 JASPAR yes 55489609
chr17 65258656 65258667 HOXA10 JASPAR yes 55489610
chr17 65258657 65258666 CDX1 JASPAR yes 21279023
chr17 65258657 65258666 CDX1 JASPAR yes 55489611
chr17 65258657 65258668 CDX2 JASPAR yes 21279024
chr17 65258657 65258668 CDX2 JASPAR yes 55489612
chr17 65258695 65258701 TBP TRANSFAC yes 21279025
chr17 65258695 65258701 TBP TRANSFAC yes 55489613
chr17 65258697 65258706 SRY JASPAR yes 21279026
chr17 65258697 65258706 SRY JASPAR yes 55489614
chr17 65258703 65258718 FOXA1 JASPAR yes 21279027
chr17 65258703 65258718 FOXA1 JASPAR yes 55489615
chr17 65258707 65258718 FOXA1 JASPAR yes 21279028
chr17 65258707 65258718 FOXA1 JASPAR yes 55489616
chr17 65258720 65258731 USF1 JASPAR yes 21279029
chr17 65258720 65258731 USF1 JASPAR yes 55489617
chr17 65258766 65258775 CDX1 JASPAR yes 21279030
chr17 65258766 65258775 CDX1 JASPAR yes 55489618
chr17 65258773 65258790 ZNF410 JASPAR yes 21279031
chr17 65258773 65258790 ZNF410 JASPAR yes 55489619
chr17 65258775 65258786 STAT1 JASPAR yes 21279032
chr17 65258775 65258786 STAT1 JASPAR yes 55489620
chr17 65258776 65258791 MEF2A JASPAR yes 21279033
chr17 65258776 65258791 MEF2A JASPAR yes 55489621
SNP sites on vista25631[chr17:65258633-65258801]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 65258725 rs150225490 C T
USF1
5003543
chr17 65258770 rs576333437 A G
CDX1
5003544
chr17 65258793 rs139171612 G A no 5003545
Genes possibly regulated by vista25631[chr17:65258633-65258801]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 65066554 65242105 - HELZ ENSG00000198265.7 65242105 0.81 0.99 16176 83472
Expression level of Genes
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miRNAs possibly regulated by vista25631[chr17:65258633-65258801]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results