EnhancerDB
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  3. vista25635[chr17:65389377-65389540]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25635[chr17:65389377-65389540]
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Tissue distribution of vista25635
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Transcription factor that possibly regulate vista25635[chr17:65389377-65389540]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 65389357 65389377 RREB1 JASPAR yes 21279232
chr17 65389357 65389377 RREB1 JASPAR yes 55497715
chr17 65389380 65389398 NR3C1 JASPAR yes 21279233
chr17 65389380 65389398 NR3C1 JASPAR yes 55497718
chr17 65389400 65389414 STAT1 JASPAR yes 21279234
chr17 65389400 65389414 STAT1 JASPAR yes 55497719
chr17 65389400 65389415 STAT2 JASPAR yes 21279235
chr17 65389400 65389415 STAT2 JASPAR yes 55497720
chr17 65389401 65389413 IRF1 JASPAR yes 21279236
chr17 65389401 65389413 IRF1 JASPAR yes 55497721
chr17 65389404 65389409 MYB TRANSFAC yes 21279237
chr17 65389404 65389409 MYB TRANSFAC yes 55497722
chr17 65389416 65389421 GATA2 JASPAR yes 21279238
chr17 65389416 65389421 GATA2 JASPAR yes 55497723
chr17 65389420 65389424 YY1 TRANSFAC yes 21279239
chr17 65389420 65389424 YY1 TRANSFAC yes 55497724
chr17 65389424 65389427 MYB TRANSFAC yes 21279240
chr17 65389424 65389427 MYB TRANSFAC yes 55497725
chr17 65389438 65389442 YY1 TRANSFAC yes 21279241
chr17 65389438 65389442 YY1 TRANSFAC yes 55497726
chr17 65389448 65389462 PLAG1 JASPAR yes 21279242
chr17 65389448 65389462 PLAG1 JASPAR yes 55497727
chr17 65389453 65389468 TFAP2C JASPAR yes 21279243
chr17 65389453 65389468 TFAP2C JASPAR yes 55497728
chr17 65389455 65389467 INSM1 JASPAR yes 21279244
chr17 65389455 65389467 INSM1 JASPAR yes 55497729
chr17 65389455 65389474 RFX2 JASPAR yes 21279245
chr17 65389455 65389474 RFX2 JASPAR yes 55497730
chr17 65389457 65389472 RFX5 JASPAR yes 21279246
chr17 65389457 65389472 RFX5 JASPAR yes 55497731
chr17 65389463 65389475 ZBTB7A JASPAR yes 21279247
chr17 65389463 65389475 ZBTB7A JASPAR yes 55497732
chr17 65389464 65389476 ZBTB7B JASPAR yes 21279248
chr17 65389464 65389476 ZBTB7C JASPAR yes 21279249
chr17 65389464 65389476 ZBTB7B JASPAR yes 55497733
chr17 65389464 65389476 ZBTB7C JASPAR yes 55497734
chr17 65389474 65389495 IRF1 JASPAR yes 21279250
chr17 65389474 65389495 IRF1 JASPAR yes 55497735
chr17 65389483 65389487 NFE TRANSFAC yes 21279251
chr17 65389483 65389487 NFE TRANSFAC yes 55497736
chr17 65389510 65389515 GATA1 TRANSFAC yes 21279252
chr17 65389510 65389515 GATA1 TRANSFAC yes 55497737
chr17 65389517 65389538 IRF1 JASPAR yes 21279253
chr17 65389517 65389538 IRF1 JASPAR yes 55497738
chr17 65389519 65389534 STAT2 JASPAR yes 21279254
chr17 65389519 65389534 STAT2 JASPAR yes 55497739
chr17 65389524 65389539 FOXP1 JASPAR yes 21279255
chr17 65389524 65389539 FOXP1 JASPAR yes 55497740
chr17 65389530 65389540 HOXA13 JASPAR yes 21279256
chr17 65389530 65389540 HOXB13 JASPAR yes 21279257
chr17 65389530 65389540 HOXD13 JASPAR yes 21279258
chr17 65389530 65389540 HOXA13 JASPAR yes 55497741
chr17 65389530 65389540 HOXB13 JASPAR yes 55497742
chr17 65389530 65389540 HOXD13 JASPAR yes 55497743
chr17 65389531 65389541 ALX3 JASPAR yes 21279259
chr17 65389531 65389541 ESX1 JASPAR yes 21279260
chr17 65389531 65389541 GBX2 JASPAR yes 21279261
chr17 65389531 65389541 GSX1 JASPAR yes 21279262
chr17 65389531 65389541 GSX2 JASPAR yes 21279263
chr17 65389531 65389541 HESX1 JASPAR yes 21279264
chr17 65389531 65389541 HOXB3 JASPAR yes 21279265
chr17 65389531 65389541 LBX2 JASPAR yes 21279266
chr17 65389531 65389541 LHX2 JASPAR yes 21279267
chr17 65389531 65389541 MIXL1 JASPAR yes 21279268
chr17 65389531 65389541 MNX1 JASPAR yes 21279269
chr17 65389531 65389541 RAX JASPAR yes 21279270
chr17 65389531 65389541 ALX3 JASPAR yes 55497744
chr17 65389531 65389541 ESX1 JASPAR yes 55497745
chr17 65389531 65389541 GBX2 JASPAR yes 55497746
chr17 65389531 65389541 GSX1 JASPAR yes 55497747
chr17 65389531 65389541 GSX2 JASPAR yes 55497748
chr17 65389531 65389541 HESX1 JASPAR yes 55497749
chr17 65389531 65389541 HOXB3 JASPAR yes 55497750
chr17 65389531 65389541 LBX2 JASPAR yes 55497751
chr17 65389531 65389541 LHX2 JASPAR yes 55497752
chr17 65389531 65389541 MIXL1 JASPAR yes 55497753
chr17 65389531 65389541 MNX1 JASPAR yes 55497754
chr17 65389531 65389541 RAX JASPAR yes 55497755
chr17 65389532 65389540 BARX1 JASPAR yes 21279271
chr17 65389532 65389540 BSX JASPAR yes 21279272
chr17 65389532 65389540 DLX6 JASPAR yes 21279273
chr17 65389532 65389540 ISX JASPAR yes 21279274
chr17 65389532 65389540 LBX1 JASPAR yes 21279275
chr17 65389532 65389540 LHX9 JASPAR yes 21279276
chr17 65389532 65389540 MSX1 JASPAR yes 21279277
chr17 65389532 65389540 MSX2 JASPAR yes 21279278
chr17 65389532 65389540 NKX6-2 JASPAR yes 21279279
chr17 65389532 65389540 PRRX1 JASPAR yes 21279280
chr17 65389532 65389540 RAX2 JASPAR yes 21279281
chr17 65389532 65389540 SHOX JASPAR yes 21279282
chr17 65389532 65389540 UNCX JASPAR yes 21279283
chr17 65389532 65389540 BARX1 JASPAR yes 55497756
chr17 65389532 65389540 BSX JASPAR yes 55497757
chr17 65389532 65389540 DLX6 JASPAR yes 55497758
chr17 65389532 65389540 ISX JASPAR yes 55497759
chr17 65389532 65389540 LBX1 JASPAR yes 55497760
chr17 65389532 65389540 LHX9 JASPAR yes 55497761
chr17 65389532 65389540 MSX1 JASPAR yes 55497762
chr17 65389532 65389540 MSX2 JASPAR yes 55497763
chr17 65389532 65389540 NKX6-2 JASPAR yes 55497764
chr17 65389532 65389540 PRRX1 JASPAR yes 55497765
chr17 65389532 65389540 RAX2 JASPAR yes 55497766
chr17 65389532 65389540 SHOX JASPAR yes 55497767
chr17 65389532 65389540 UNCX JASPAR yes 55497768
chr17 65389532 65389541 VENTX JASPAR yes 21279284
chr17 65389532 65389541 VENTX JASPAR yes 55497769
chr17 65389532 65389546 ONECUT3 JASPAR yes 21279285
chr17 65389532 65389546 ONECUT3 JASPAR yes 55497770
chr17 65389533 65389543 PAX3 JASPAR yes 21279286
chr17 65389533 65389543 PAX7 JASPAR yes 21279287
chr17 65389533 65389543 PAX3 JASPAR yes 55497771
chr17 65389533 65389543 PAX7 JASPAR yes 55497772
SNP sites on vista25635[chr17:65389377-65389540]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 65389381 rs79616463 T A
NR3C1
5004418
chr17 65389413 rs76348668 T C
IRF1 STAT1 STAT2
5004419
chr17 65389462 rs74605560 C A,T
INSM1 PLAG1 RFX2 RFX5 TFAP2C
5004420
Genes possibly regulated by vista25635[chr17:65389377-65389540]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 65334032 65362743 - PSMD12 ENSG00000197170.5 65362743 0.83 0.99 16177 73366
chr17 65373575 65693372 + PITPNC1 ENSG00000154217.10 65373575 0.77 1.0 16178 84198
Expression level of Genes
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miRNAs possibly regulated by vista25635[chr17:65389377-65389540]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results