EnhancerDB
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  3. vista25638[chr17:65430262-65430593]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25638[chr17:65430262-65430593]
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Tissue distribution of vista25638
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Transcription factor that possibly regulate vista25638[chr17:65430262-65430593]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 65430309 65430324 JUND JASPAR yes 21279430
chr17 65430309 65430324 JUND JASPAR yes 55503380
chr17 65430310 65430323 JUN JASPAR yes 21279431
chr17 65430310 65430323 JUN JASPAR yes 55503381
chr17 65430311 65430324 ATF4 JASPAR yes 21279432
chr17 65430311 65430324 ATF4 JASPAR yes 55503382
chr17 65430312 65430324 DBP JASPAR yes 21279433
chr17 65430312 65430324 HLF JASPAR yes 21279434
chr17 65430312 65430324 JDP2 JASPAR yes 21279435
chr17 65430312 65430324 TEF JASPAR yes 21279436
chr17 65430312 65430324 DBP JASPAR yes 55503383
chr17 65430312 65430324 HLF JASPAR yes 55503384
chr17 65430312 65430324 JDP2 JASPAR yes 55503385
chr17 65430312 65430324 TEF JASPAR yes 55503386
chr17 65430314 65430325 NFIL3 JASPAR yes 21279437
chr17 65430314 65430325 NFIL3 JASPAR yes 55503387
chr17 65430315 65430332 ESR1 JASPAR yes 21279438
chr17 65430315 65430332 ESR1 JASPAR yes 55503388
chr17 65430316 65430334 MAFF JASPAR yes 21279439
chr17 65430316 65430334 MAFF JASPAR yes 55503389
chr17 65430318 65430329 NRL JASPAR yes 21279440
chr17 65430318 65430329 NRL JASPAR yes 55503390
chr17 65430318 65430333 MAFK JASPAR yes 21279441
chr17 65430318 65430333 MAFK JASPAR yes 55503391
chr17 65430318 65430339 MAFG JASPAR yes 21279442
chr17 65430318 65430339 MAFG JASPAR yes 55503392
chr17 65430325 65430333 TBX15 JASPAR yes 21279443
chr17 65430325 65430333 TBX1 JASPAR yes 21279444
chr17 65430325 65430333 TBX4 JASPAR yes 21279445
chr17 65430325 65430333 TBX5 JASPAR yes 21279446
chr17 65430325 65430333 TBX15 JASPAR yes 55503393
chr17 65430325 65430333 TBX1 JASPAR yes 55503394
chr17 65430325 65430333 TBX4 JASPAR yes 55503395
chr17 65430325 65430333 TBX5 JASPAR yes 55503396
chr17 65430330 65430342 NHLH1 JASPAR yes 21279447
chr17 65430330 65430342 NHLH1 JASPAR yes 55503397
chr17 65430331 65430341 NHLH1 JASPAR yes 21279448
chr17 65430331 65430341 TFAP4 JASPAR yes 21279449
chr17 65430331 65430341 NHLH1 JASPAR yes 55503398
chr17 65430331 65430341 TFAP4 JASPAR yes 55503399
chr17 65430332 65430345 SCRT2 JASPAR yes 21279450
chr17 65430332 65430345 SCRT2 JASPAR yes 55503400
chr17 65430359 65430369 MZF1 JASPAR yes 21279451
chr17 65430359 65430369 MZF1 JASPAR yes 55503401
chr17 65430362 65430368 SP1 TRANSFAC yes 21279452
chr17 65430362 65430368 SP1 TRANSFAC yes 55503402
chr17 65430371 65430380 HIC2 JASPAR yes 21279453
chr17 65430371 65430380 HIC2 JASPAR yes 55503403
chr17 65430371 65430383 GLI2 JASPAR yes 21279454
chr17 65430371 65430383 GLI2 JASPAR yes 55503404
chr17 65430384 65430395 STAT1 JASPAR yes 21279455
chr17 65430384 65430395 STAT1 JASPAR yes 55503405
chr17 65430409 65430414 MYB TRANSFAC yes 21279456
chr17 65430409 65430414 MYB TRANSFAC yes 55503406
chr17 65430451 65430455 YY1 TRANSFAC yes 21279457
chr17 65430451 65430455 YY1 TRANSFAC yes 55503407
chr17 65430475 65430490 RFX5 JASPAR yes 21279458
chr17 65430475 65430490 RFX5 JASPAR yes 55503408
chr17 65430492 65430506 SPIC JASPAR yes 21279459
chr17 65430492 65430506 SPIC JASPAR yes 55503409
chr17 65430496 65430503 SPIB JASPAR yes 21279460
chr17 65430496 65430503 SPIB JASPAR yes 55503410
chr17 65430503 65430514 E2F6 JASPAR yes 21279461
chr17 65430503 65430514 E2F6 JASPAR yes 55503411
chr17 65430504 65430525 ZNF263 JASPAR yes 21279462
chr17 65430504 65430525 ZNF263 JASPAR yes 55503412
chr17 65430505 65430525 RREB1 JASPAR yes 21279463
chr17 65430505 65430525 RREB1 JASPAR yes 55503413
chr17 65430511 65430518 SP1 TRANSFAC yes 21279464
chr17 65430511 65430518 SP1 TRANSFAC yes 55503414
chr17 65430512 65430517 SP1 TRANSFAC yes 21279465
chr17 65430512 65430517 SP1 TRANSFAC yes 55503415
chr17 65430512 65430518 SP1 TRANSFAC yes 21279466
chr17 65430512 65430518 SP1 TRANSFAC yes 55503416
chr17 65430526 65430544 IRF2 JASPAR yes 21279467
chr17 65430526 65430544 IRF2 JASPAR yes 55503417
chr17 65430529 65430544 STAT2 JASPAR yes 21279468
chr17 65430529 65430544 STAT2 JASPAR yes 55503418
chr17 65430530 65430544 STAT1 JASPAR yes 21279469
chr17 65430530 65430544 STAT1 JASPAR yes 55503419
chr17 65430534 65430539 ETS2 TRANSFAC yes 21279470
chr17 65430534 65430539 ETS2 TRANSFAC yes 55503420
chr17 65430536 65430547 ELK4 JASPAR yes 21279471
chr17 65430536 65430547 ELK4 JASPAR yes 55503421
chr17 65430537 65430550 ELF1 JASPAR yes 21279472
chr17 65430537 65430550 ELF1 JASPAR yes 55503422
chr17 65430539 65430545 ETS1 JASPAR yes 21279473
chr17 65430539 65430545 ETS1 JASPAR yes 55503423
chr17 65430539 65430549 ELK1 JASPAR yes 21279474
chr17 65430539 65430549 ELK1 JASPAR yes 55503424
chr17 65430557 65430568 NFIL3 JASPAR yes 21279475
chr17 65430557 65430568 NFIL3 JASPAR yes 55503425
chr17 65430558 65430562 YY1 TRANSFAC yes 21279476
chr17 65430558 65430562 YY1 TRANSFAC yes 55503426
chr17 65430558 65430570 DBP JASPAR yes 21279477
chr17 65430558 65430570 HLF JASPAR yes 21279478
chr17 65430558 65430570 JDP2 JASPAR yes 21279479
chr17 65430558 65430570 TEF JASPAR yes 21279480
chr17 65430558 65430570 DBP JASPAR yes 55503427
chr17 65430558 65430570 HLF JASPAR yes 55503428
chr17 65430558 65430570 JDP2 JASPAR yes 55503429
chr17 65430558 65430570 TEF JASPAR yes 55503430
chr17 65430559 65430570 CEBPA JASPAR yes 21279481
chr17 65430559 65430570 CEBPA JASPAR yes 55503431
chr17 65430559 65430572 JUN JASPAR yes 21279482
chr17 65430559 65430572 JUN JASPAR yes 55503432
chr17 65430560 65430571 NFIL3 JASPAR yes 21279483
chr17 65430560 65430571 NFIL3 JASPAR yes 55503433
chr17 65430565 65430568 MYB TRANSFAC yes 21279484
chr17 65430565 65430568 MYB TRANSFAC yes 55503434
chr17 65430576 65430595 REST JASPAR yes 21279485
chr17 65430576 65430595 REST JASPAR yes 55503435
chr17 65430579 65430598 REST JASPAR yes 21279486
chr17 65430579 65430598 REST JASPAR yes 55503436
SNP sites on vista25638[chr17:65430262-65430593]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 65430273 rs565583837 C T no 5004887
chr17 65430409 rs117431051 C T
MYB
5004888
chr17 65430467 rs116963662 T A no 5004889
Genes possibly regulated by vista25638[chr17:65430262-65430593]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 65334032 65362743 - PSMD12 ENSG00000197170.5 65362743 0.83 0.99 16177 32481
chr17 65373575 65693372 + PITPNC1 ENSG00000154217.10 65373575 0.77 1.0 16178 43313
Expression level of Genes
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miRNAs possibly regulated by vista25638[chr17:65430262-65430593]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results