EnhancerDB
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  3. vista25643[chr17:65471347-65471548]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25643[chr17:65471347-65471548]
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Tissue distribution of vista25643
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Transcription factor that possibly regulate vista25643[chr17:65471347-65471548]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 65471509 65471908 CTCF UCSC Txn Factor no Conserved 108285904
chr17 65471509 65471908 CTCF UCSC Txn Factor no Conserved 108285905
chr17 65471367 65471372 ETS2 TRANSFAC yes 21279772
chr17 65471367 65471372 ETS2 TRANSFAC yes 55508903
chr17 65471370 65471386 SOX4 JASPAR yes 21279773
chr17 65471370 65471386 SOX4 JASPAR yes 55508904
chr17 65471371 65471386 SOX21 JASPAR yes 21279774
chr17 65471371 65471386 SOX21 JASPAR yes 55508905
chr17 65471376 65471388 PBX1 JASPAR yes 21279775
chr17 65471376 65471388 PBX1 JASPAR yes 55508906
chr17 65471378 65471392 GATA2 JASPAR yes 21279776
chr17 65471378 65471392 GATA2 JASPAR yes 55508907
chr17 65471380 65471389 SRY JASPAR yes 21279777
chr17 65471380 65471389 SRY JASPAR yes 55508908
chr17 65471390 65471395 MYC TRANSFAC yes 21279778
chr17 65471390 65471395 MYC TRANSFAC yes 55508909
chr17 65471394 65471399 TFAP2A TRANSFAC yes 21279779
chr17 65471394 65471399 TFAP2A TRANSFAC yes 55508910
chr17 65471394 65471400 MZF1 JASPAR yes 21279780
chr17 65471394 65471400 MZF1 JASPAR yes 55508911
chr17 65471403 65471413 MSC JASPAR yes 21279781
chr17 65471403 65471413 MSC JASPAR yes 55508912
chr17 65471410 65471426 NFYA JASPAR yes 21279782
chr17 65471410 65471426 NFYA JASPAR yes 55508913
chr17 65471415 65471428 POU3F3 JASPAR yes 21279783
chr17 65471415 65471428 POU3F3 JASPAR yes 55508914
chr17 65471437 65471441 YY1 TRANSFAC yes 21279784
chr17 65471437 65471441 YY1 TRANSFAC yes 55508915
chr17 65471492 65471499 TBP TRANSFAC yes 21279785
chr17 65471492 65471499 TFIID TRANSFAC yes 21279786
chr17 65471492 65471499 TBP TRANSFAC yes 55508916
chr17 65471492 65471499 TFIID TRANSFAC yes 55508917
chr17 65471529 65471540 TBX20 JASPAR yes 21279787
chr17 65471529 65471540 TBX20 JASPAR yes 55508918
chr17 65471541 65471545 YY1 TRANSFAC yes 21279788
chr17 65471541 65471545 YY1 TRANSFAC yes 55508919
chr17 65471548 65471552 NFE TRANSFAC yes 21279789
chr17 65471548 65471552 NFE TRANSFAC yes 55508920
SNP sites on vista25643[chr17:65471347-65471548]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 65471429 rs145387623 C G no 5005350
chr17 65471511 rs147846067 G A
CTCF
5005351
Genes possibly regulated by vista25643[chr17:65471347-65471548]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 65373575 65693372 + PITPNC1 ENSG00000154217.10 65373575 0.77 1.0 16178 2228
Expression level of Genes
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miRNAs possibly regulated by vista25643[chr17:65471347-65471548]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results