EnhancerDB
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  3. vista25656[chr17:65619223-65619512]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25656[chr17:65619223-65619512]
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Tissue distribution of vista25656
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Transcription factor that possibly regulate vista25656[chr17:65619223-65619512]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 65619223 65619238 FOXP1 JASPAR yes 21280486
chr17 65619224 65619239 FOXP1 JASPAR yes 21280487
chr17 65619224 65619245 IRF1 JASPAR yes 21280488
chr17 65619225 65619240 FOXP1 JASPAR yes 21280489
chr17 65619225 65619246 IRF1 JASPAR yes 21280490
chr17 65619226 65619241 FOXP1 JASPAR yes 21280491
chr17 65619226 65619247 IRF1 JASPAR yes 21280492
chr17 65619227 65619242 FOXP1 JASPAR yes 21280493
chr17 65619227 65619248 IRF1 JASPAR yes 21280494
chr17 65619228 65619243 FOXP1 JASPAR yes 21280495
chr17 65619228 65619249 IRF1 JASPAR yes 21280496
chr17 65619229 65619244 FOXP1 JASPAR yes 21280497
chr17 65619229 65619250 IRF1 JASPAR yes 21280498
chr17 65619230 65619245 FOXP1 JASPAR yes 21280499
chr17 65619230 65619251 IRF1 JASPAR yes 21280500
chr17 65619231 65619246 FOXP1 JASPAR yes 21280501
chr17 65619231 65619252 IRF1 JASPAR yes 21280502
chr17 65619232 65619247 FOXP1 JASPAR yes 21280503
chr17 65619233 65619248 FOXP1 JASPAR yes 21280504
chr17 65619233 65619254 IRF1 JASPAR yes 21280505
chr17 65619234 65619249 FOXP1 JASPAR yes 21280506
chr17 65619237 65619252 PRDM1 JASPAR yes 21280507
chr17 65619237 65619252 STAT2 JASPAR yes 21280508
chr17 65619286 65619290 NFE TRANSFAC yes 21280509
chr17 65619300 65619305 GATA1 TRANSFAC yes 21280510
chr17 65619302 65619316 PAX6 JASPAR yes 21280511
chr17 65619346 65619367 ZNF263 JASPAR yes 21280512
chr17 65619350 65619360 EVX1 JASPAR yes 21280513
chr17 65619350 65619360 EVX2 JASPAR yes 21280514
chr17 65619350 65619360 LHX6 JASPAR yes 21280515
chr17 65619373 65619378 GATA2 JASPAR yes 21280516
chr17 65619393 65619399 YY1 JASPAR yes 21280517
chr17 65619401 65619415 GATA2 JASPAR yes 21280518
chr17 65619403 65619411 GATA3 JASPAR yes 21280519
chr17 65619438 65619444 MZF1 JASPAR yes 21280520
chr17 65619443 65619453 FIGLA JASPAR yes 21280521
chr17 65619443 65619453 TCF3 JASPAR yes 21280522
chr17 65619444 65619453 SNAI2 JASPAR yes 21280523
chr17 65619445 65619450 USF2 TRANSFAC yes 21280524
chr17 65619460 65619472 MEF2A JASPAR yes 21280525
chr17 65619460 65619472 MEF2B JASPAR yes 21280526
chr17 65619472 65619477 GATA2 JASPAR yes 21280527
chr17 65619474 65619488 ONECUT3 JASPAR yes 21280528
chr17 65619475 65619496 IRF1 JASPAR yes 21280529
chr17 65619481 65619502 IRF1 JASPAR yes 21280530
chr17 65619482 65619497 FOXP1 JASPAR yes 21280531
chr17 65619483 65619498 STAT2 JASPAR yes 21280532
chr17 65619486 65619507 IRF1 JASPAR yes 21280533
chr17 65619487 65619502 FOXP1 JASPAR yes 21280534
chr17 65619487 65619508 IRF1 JASPAR yes 21280535
chr17 65619488 65619503 STAT2 JASPAR yes 21280536
chr17 65619491 65619512 IRF1 JASPAR yes 21280537
chr17 65619491 65619512 ZNF263 JASPAR yes 21280538
chr17 65619492 65619507 FOXP1 JASPAR yes 21280539
SNP sites on vista25656[chr17:65619223-65619512]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 65619301 rs140213722 G A,C
GATA1
5006814
chr17 65619482 rs555642155 A ATTTTC
FOXP1 IRF1 ONECUT3
5006815
chr17 65619498 rs145516271 T C
FOXP1 IRF1 STAT2 ZNF263
5006816
chr17 65619505 rs145356835 T G
FOXP1 IRF1 ZNF263
5006817
Genes possibly regulated by vista25656[chr17:65619223-65619512]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 65713949 65740647 + NOL11 ENSG00000130935.5 65713949 0.71 0.99 16179 5563
Expression level of Genes
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miRNAs possibly regulated by vista25656[chr17:65619223-65619512]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results