EnhancerDB
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  3. vista25658[chr17:65780558-65780827]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25658[chr17:65780558-65780827]
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Tissue distribution of vista25658
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Transcription factor that possibly regulate vista25658[chr17:65780558-65780827]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 65780381 65780897 PML UCSC Txn Factor no Conserved 108286145
chr17 65780391 65781146 GATA1 UCSC Txn Factor no Conserved 108286149
chr17 65780437 65781060 NR2F2 UCSC Txn Factor no Conserved 108286157
chr17 65780445 65780795 STAT5A UCSC Txn Factor no Conserved 108286159
chr17 65780496 65780739 TAL1 UCSC Txn Factor no Conserved 108286175
chr17 65780497 65780748 TEAD4 UCSC Txn Factor no Conserved 108286177
chr17 65780526 65780705 EP300 UCSC Txn Factor no Conserved 108286182
chr17 65780542 65780558 RFX2 JASPAR yes 21280546
chr17 65780542 65780558 RFX3 JASPAR yes 21280547
chr17 65780542 65780558 RFX4 JASPAR yes 21280548
chr17 65780542 65780558 RFX2 JASPAR yes 55537509
chr17 65780542 65780558 RFX3 JASPAR yes 55537510
chr17 65780542 65780558 RFX4 JASPAR yes 55537511
chr17 65780554 65780570 SOX4 JASPAR yes 21280549
chr17 65780554 65780570 SOX4 JASPAR yes 55537513
chr17 65780564 65780583 RFX2 JASPAR yes 21280550
chr17 65780564 65780583 RFX2 JASPAR yes 55537514
chr17 65780576 65780591 STAT2 JASPAR yes 21280551
chr17 65780576 65780591 STAT2 JASPAR yes 55537515
chr17 65780578 65780599 IRF1 JASPAR yes 21280552
chr17 65780578 65780599 IRF1 JASPAR yes 55537516
chr17 65780583 65780595 IRF1 JASPAR yes 21280553
chr17 65780583 65780595 IRF1 JASPAR yes 55537517
chr17 65780594 65780604 SP1 JASPAR yes 21280554
chr17 65780594 65780604 SP1 JASPAR yes 55537518
chr17 65780597 65780602 SP1 TRANSFAC yes 21280555
chr17 65780597 65780602 SP1 TRANSFAC yes 55537519
chr17 65780624 65780638 GATA2 JASPAR yes 21280556
chr17 65780624 65780638 GATA2 JASPAR yes 55537520
chr17 65780626 65780634 GATA3 JASPAR yes 21280557
chr17 65780626 65780634 GATA5 JASPAR yes 21280558
chr17 65780626 65780634 GATA3 JASPAR yes 55537521
chr17 65780626 65780634 GATA5 JASPAR yes 55537522
chr17 65780646 65780657 E2F4 JASPAR yes 21280559
chr17 65780646 65780657 E2F6 JASPAR yes 21280560
chr17 65780646 65780657 E2F4 JASPAR yes 55537523
chr17 65780646 65780657 E2F6 JASPAR yes 55537524
chr17 65780647 65780658 E2F1 JASPAR yes 21280561
chr17 65780647 65780658 E2F1 JASPAR yes 55537525
chr17 65780647 65780659 E2F8 JASPAR yes 21280562
chr17 65780647 65780659 E2F8 JASPAR yes 55537526
chr17 65780683 65780694 FLI1 JASPAR yes 21280563
chr17 65780683 65780694 FLI1 JASPAR yes 55537527
chr17 65780684 65780694 GABPA JASPAR yes 21280564
chr17 65780684 65780694 GABPA JASPAR yes 55537528
chr17 65780684 65780699 STAT1 JASPAR yes 21280565
chr17 65780684 65780699 STAT1 JASPAR yes 55537529
chr17 65780685 65780692 SPI1 JASPAR yes 21280566
chr17 65780685 65780692 SPI1 JASPAR yes 55537530
chr17 65780685 65780693 FEV JASPAR yes 21280567
chr17 65780685 65780693 FEV JASPAR yes 55537531
chr17 65780687 65780692 ETS2 TRANSFAC yes 21280568
chr17 65780687 65780692 ETS2 TRANSFAC yes 55537532
chr17 65780710 65780714 YY1 TRANSFAC yes 21280569
chr17 65780710 65780714 YY1 TRANSFAC yes 55537533
chr17 65780713 65780722 THAP1 JASPAR yes 21280570
chr17 65780713 65780722 THAP1 JASPAR yes 55537534
chr17 65780731 65780745 NR2F1 JASPAR yes 21280571
chr17 65780731 65780745 NR2F1 JASPAR yes 55537535
chr17 65780742 65780759 RARA JASPAR yes 21280572
chr17 65780742 65780759 RARA JASPAR yes 55537536
chr17 65780761 65780765 YY1 TRANSFAC yes 21280573
chr17 65780761 65780765 YY1 TRANSFAC yes 55537537
chr17 65780768 65780777 SNAI2 JASPAR yes 21280574
chr17 65780768 65780777 SNAI2 JASPAR yes 55537538
chr17 65780768 65780778 FIGLA JASPAR yes 21280575
chr17 65780768 65780778 TCF3 JASPAR yes 21280576
chr17 65780768 65780778 FIGLA JASPAR yes 55537539
chr17 65780768 65780778 TCF3 JASPAR yes 55537540
chr17 65780775 65780785 BARHL2 JASPAR yes 21280577
chr17 65780775 65780785 BARHL2 JASPAR yes 55537541
chr17 65780777 65780787 PAX7 JASPAR yes 21280578
chr17 65780777 65780787 PAX7 JASPAR yes 55537542
chr17 65780792 65780804 PKNOX2 JASPAR yes 21280579
chr17 65780792 65780804 PKNOX2 JASPAR yes 55537543
chr17 65780793 65780803 ID4 JASPAR yes 21280580
chr17 65780793 65780803 MSC JASPAR yes 21280581
chr17 65780793 65780803 MYF6 JASPAR yes 21280582
chr17 65780793 65780803 TFAP4 JASPAR yes 21280583
chr17 65780793 65780803 ID4 JASPAR yes 55537544
chr17 65780793 65780803 MSC JASPAR yes 55537545
chr17 65780793 65780803 MYF6 JASPAR yes 55537546
chr17 65780793 65780803 TFAP4 JASPAR yes 55537547
chr17 65780799 65780814 FOXP1 JASPAR yes 21280584
chr17 65780799 65780814 FOXP1 JASPAR yes 55537548
chr17 65780808 65780828 PPARG JASPAR yes 21280585
chr17 65780808 65780828 PPARG JASPAR yes 55537549
chr17 65780821 65780824 MYB TRANSFAC yes 21280586
chr17 65780821 65780824 MYB TRANSFAC yes 55537550
chr17 65780824 65780845 IRF1 JASPAR yes 21280587
chr17 65780824 65780845 IRF1 JASPAR yes 55537551
chr17 65780827 65780837 GABPA JASPAR yes 21280588
chr17 65780827 65780837 GABPA JASPAR yes 55537552
chr17 65780827 65780840 ELF1 JASPAR yes 21280589
chr17 65780827 65780840 ELF1 JASPAR yes 55537553
chr17 65780827 65780841 SPI1 JASPAR yes 21280590
chr17 65780827 65780841 SPIC JASPAR yes 21280591
chr17 65780827 65780841 SPI1 JASPAR yes 55537554
chr17 65780827 65780841 SPIC JASPAR yes 55537555
SNP sites on vista25658[chr17:65780558-65780827]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 65780599 rs140875138 C T
EP300 GATA1 IRF1 NR2F2 PML SP1 STAT5A TAL1 TEAD4
5008081
chr17 65780647 rs150157988 C T
E2F1 E2F4 E2F6 E2F8 EP300 GATA1 NR2F2 PML STAT5A TAL1 TEAD4
5008082
chr17 65780650 rs71382148 T C
E2F1 E2F4 E2F6 E2F8 EP300 GATA1 NR2F2 PML STAT5A TAL1 TEAD4
5008083
chr17 65780662 rs1978279 G A
EP300 GATA1 NR2F2 PML STAT5A TAL1 TEAD4
5008084
chr17 65780716 rs59991761 G A
GATA1 NR2F2 PML STAT5A TAL1 TEAD4 THAP1
5008085
Genes possibly regulated by vista25658[chr17:65780558-65780827]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 65713949 65740647 + NOL11 ENSG00000130935.5 65713949 0.71 0.99 16179 33391
chr17 65821640 65980494 + BPTF ENSG00000171634.12 65821640 0.77 0.99 16180 59187
Expression level of Genes
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miRNAs possibly regulated by vista25658[chr17:65780558-65780827]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results