EnhancerDB
  1. Home
  2. Enhancers
  3. vista25660[chr17:65847253-65847408]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25660[chr17:65847253-65847408]
Back to top
Tissue distribution of vista25660
Back to top
Transcription factor that possibly regulate vista25660[chr17:65847253-65847408]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 65847275 65847289 NR2F1 JASPAR yes 21280632
chr17 65847275 65847289 NR2F1 JASPAR yes 55544151
chr17 65847288 65847299 NFIL3 JASPAR yes 21280633
chr17 65847288 65847299 NFIL3 JASPAR yes 55544152
chr17 65847293 65847296 MYB TRANSFAC yes 21280634
chr17 65847293 65847296 MYB TRANSFAC yes 55544153
chr17 65847304 65847310 NFIC JASPAR yes 21280635
chr17 65847304 65847310 NFIC JASPAR yes 55544154
chr17 65847313 65847317 H4TF2 TRANSFAC yes 21280636
chr17 65847313 65847317 H4TF2 TRANSFAC yes 55544155
chr17 65847326 65847331 SP1 TRANSFAC yes 21280637
chr17 65847326 65847331 SP1 TRANSFAC yes 55544156
chr17 65847326 65847344 ESR1 JASPAR yes 21280638
chr17 65847326 65847344 ESR1 JASPAR yes 55544157
chr17 65847347 65847352 ETS2 TRANSFAC yes 21280639
chr17 65847347 65847352 ETS2 TRANSFAC yes 55544158
chr17 65847356 65847366 RORA JASPAR yes 21280640
chr17 65847356 65847366 RORA JASPAR yes 55544159
chr17 65847357 65847370 NR2F1 JASPAR yes 21280641
chr17 65847357 65847370 NR2F1 JASPAR yes 55544160
chr17 65847358 65847376 ESR2 JASPAR yes 21280642
chr17 65847358 65847376 ESR2 JASPAR yes 55544161
chr17 65847359 65847367 NR4A2 JASPAR yes 21280643
chr17 65847359 65847367 NR4A2 JASPAR yes 55544162
chr17 65847360 65847375 ESR2 JASPAR yes 21280644
chr17 65847360 65847375 ESR2 JASPAR yes 55544163
chr17 65847361 65847365 ESR1 TRANSFAC yes 21280645
chr17 65847361 65847365 ESR1 TRANSFAC yes 55544164
chr17 65847363 65847375 GRHL1 JASPAR yes 21280646
chr17 65847363 65847375 GRHL1 JASPAR yes 55544165
chr17 65847382 65847403 IRF1 JASPAR yes 21280647
chr17 65847382 65847403 IRF1 JASPAR yes 55544166
chr17 65847384 65847405 IRF1 JASPAR yes 21280648
chr17 65847384 65847405 IRF1 JASPAR yes 55544167
chr17 65847385 65847406 IRF1 JASPAR yes 21280649
chr17 65847385 65847406 IRF1 JASPAR yes 55544168
chr17 65847387 65847402 FOXP1 JASPAR yes 21280650
chr17 65847387 65847402 FOXP1 JASPAR yes 55544169
chr17 65847388 65847403 FOXP1 JASPAR yes 21280651
chr17 65847388 65847403 FOXP1 JASPAR yes 55544170
chr17 65847389 65847404 FOXP1 JASPAR yes 21280652
chr17 65847389 65847404 FOXP1 JASPAR yes 55544171
chr17 65847390 65847405 FOXP1 JASPAR yes 21280653
chr17 65847390 65847405 FOXP1 JASPAR yes 55544172
chr17 65847391 65847406 FOXP1 JASPAR yes 21280654
chr17 65847391 65847406 FOXP1 JASPAR yes 55544173
chr17 65847392 65847407 FOXP1 JASPAR yes 21280655
chr17 65847392 65847407 FOXP1 JASPAR yes 55544174
chr17 65847393 65847408 FOXP1 JASPAR yes 21280656
chr17 65847393 65847408 FOXP1 JASPAR yes 55544175
chr17 65847394 65847409 FOXP1 JASPAR yes 21280657
chr17 65847394 65847409 FOXP1 JASPAR yes 55544176
chr17 65847408 65847411 MYB TRANSFAC yes 21280658
chr17 65847408 65847411 MYB TRANSFAC yes 55544177
SNP sites on vista25660[chr17:65847253-65847408]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 65847310 rs187856077 A G
NFIC
5008624
chr17 65847325 rs7212293 A G no 5008625
chr17 65847388 rs549231452 CT C
FOXP1 IRF1
5008626
chr17 65847388 rs57971998 CT C
FOXP1 IRF1
5008627
Genes possibly regulated by vista25660[chr17:65847253-65847408]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 65821640 65980494 + BPTF ENSG00000171634.12 65821640 0.77 0.99 16180 74387
Expression level of Genes
Back to top
miRNAs possibly regulated by vista25660[chr17:65847253-65847408]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results