EnhancerDB
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  3. vista25673[chr17:66231111-66231433]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25673[chr17:66231111-66231433]
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Tissue distribution of vista25673
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Transcription factor that possibly regulate vista25673[chr17:66231111-66231433]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 66231130 66231134 LFA1 TRANSFAC yes 21281167
chr17 66231130 66231134 LFA1 TRANSFAC yes 55562629
chr17 66231132 66231153 IRF1 JASPAR yes 21281168
chr17 66231132 66231153 IRF1 JASPAR yes 55562630
chr17 66231134 66231149 IRF9 JASPAR yes 21281169
chr17 66231134 66231149 IRF9 JASPAR yes 55562631
chr17 66231135 66231149 IRF7 JASPAR yes 21281170
chr17 66231135 66231149 IRF7 JASPAR yes 55562632
chr17 66231137 66231149 IRF1 JASPAR yes 21281171
chr17 66231137 66231149 IRF1 JASPAR yes 55562633
chr17 66231149 66231153 H1TF2 TRANSFAC yes 21281172
chr17 66231149 66231153 NFE TRANSFAC yes 21281173
chr17 66231149 66231153 SRF TRANSFAC yes 21281174
chr17 66231149 66231153 H1TF2 TRANSFAC yes 55562634
chr17 66231149 66231153 NFE TRANSFAC yes 55562635
chr17 66231149 66231153 SRF TRANSFAC yes 55562636
chr17 66231155 66231170 FOXP1 JASPAR yes 21281175
chr17 66231155 66231170 FOXP1 JASPAR yes 55562637
chr17 66231156 66231162 TBP TRANSFAC yes 21281176
chr17 66231156 66231162 TBP TRANSFAC yes 55562638
chr17 66231156 66231177 IRF1 JASPAR yes 21281177
chr17 66231156 66231177 IRF1 JASPAR yes 55562639
chr17 66231160 66231175 FOXP1 JASPAR yes 21281178
chr17 66231160 66231175 FOXP1 JASPAR yes 55562640
chr17 66231171 66231177 GATA3 JASPAR yes 21281179
chr17 66231171 66231177 GATA3 JASPAR yes 55562641
chr17 66231179 66231185 GATA3 JASPAR yes 21281180
chr17 66231179 66231185 GATA3 JASPAR yes 55562642
chr17 66231187 66231192 GATA1 TRANSFAC yes 21281181
chr17 66231187 66231192 GATA1 TRANSFAC yes 55562643
chr17 66231188 66231202 POU1F1 JASPAR yes 21281182
chr17 66231188 66231202 POU1F1 JASPAR yes 55562644
chr17 66231189 66231201 POU3F2 JASPAR yes 21281183
chr17 66231189 66231201 POU3F2 JASPAR yes 55562645
chr17 66231223 66231237 STAT1 JASPAR yes 21281184
chr17 66231223 66231237 STAT1 JASPAR yes 55562646
chr17 66231223 66231238 PRDM1 JASPAR yes 21281185
chr17 66231223 66231238 PRDM1 JASPAR yes 55562647
chr17 66231238 66231252 JUN JASPAR yes 21281186
chr17 66231238 66231252 JUN JASPAR yes 55562648
chr17 66231241 66231252 FOSL2 JASPAR yes 21281187
chr17 66231241 66231252 JUNB JASPAR yes 21281188
chr17 66231241 66231252 FOSL2 JASPAR yes 55562649
chr17 66231241 66231252 JUNB JASPAR yes 55562650
chr17 66231242 66231253 FOS JASPAR yes 21281189
chr17 66231242 66231253 FOSL1 JASPAR yes 21281190
chr17 66231242 66231253 JUND JASPAR yes 21281191
chr17 66231242 66231253 NFE2 JASPAR yes 21281192
chr17 66231242 66231253 FOS JASPAR yes 55562651
chr17 66231242 66231253 FOSL1 JASPAR yes 55562652
chr17 66231242 66231253 JUND JASPAR yes 55562653
chr17 66231242 66231253 NFE2 JASPAR yes 55562654
chr17 66231243 66231250 JUN TRANSFAC yes 21281193
chr17 66231243 66231250 JUN TRANSFAC yes 55562655
chr17 66231243 66231252 JDP2 JASPAR yes 21281194
chr17 66231243 66231252 JDP2 JASPAR yes 55562656
chr17 66231243 66231254 FOSL2 JASPAR yes 21281195
chr17 66231243 66231254 JUNB JASPAR yes 21281196
chr17 66231243 66231254 FOSL2 JASPAR yes 55562657
chr17 66231243 66231254 JUNB JASPAR yes 55562658
chr17 66231243 66231257 JUN JASPAR yes 21281197
chr17 66231243 66231257 JUN JASPAR yes 55562659
chr17 66231267 66231279 INSM1 JASPAR yes 21281198
chr17 66231267 66231279 INSM1 JASPAR yes 55562660
chr17 66231271 66231280 HIC2 JASPAR yes 21281199
chr17 66231271 66231280 HIC2 JASPAR yes 55562661
chr17 66231272 66231292 TP53 JASPAR yes 21281200
chr17 66231272 66231292 TP53 JASPAR yes 55562662
chr17 66231274 66231278 LFA1 TRANSFAC yes 21281201
chr17 66231274 66231278 LFA1 TRANSFAC yes 55562663
chr17 66231274 66231284 REL JASPAR yes 21281202
chr17 66231274 66231284 REL JASPAR yes 55562664
chr17 66231274 66231285 NFKB1 JASPAR yes 21281203
chr17 66231274 66231285 NFKB1 JASPAR yes 55562665
chr17 66231277 66231281 YY1 TRANSFAC yes 21281204
chr17 66231277 66231281 YY1 TRANSFAC yes 55562666
chr17 66231279 66231285 ETS1 JASPAR yes 21281205
chr17 66231279 66231285 ETS1 JASPAR yes 55562667
chr17 66231283 66231293 ALX3 JASPAR yes 21281206
chr17 66231283 66231293 EMX2 JASPAR yes 21281207
chr17 66231283 66231293 EVX2 JASPAR yes 21281208
chr17 66231283 66231293 GSX1 JASPAR yes 21281209
chr17 66231283 66231293 GSX2 JASPAR yes 21281210
chr17 66231283 66231293 HOXA2 JASPAR yes 21281211
chr17 66231283 66231293 HOXB2 JASPAR yes 21281212
chr17 66231283 66231293 HOXB3 JASPAR yes 21281213
chr17 66231283 66231293 MEOX1 JASPAR yes 21281214
chr17 66231283 66231293 ALX3 JASPAR yes 55562668
chr17 66231283 66231293 EMX2 JASPAR yes 55562669
chr17 66231283 66231293 EVX2 JASPAR yes 55562670
chr17 66231283 66231293 GSX1 JASPAR yes 55562671
chr17 66231283 66231293 GSX2 JASPAR yes 55562672
chr17 66231283 66231293 HOXA2 JASPAR yes 55562673
chr17 66231283 66231293 HOXB2 JASPAR yes 55562674
chr17 66231283 66231293 HOXB3 JASPAR yes 55562675
chr17 66231283 66231293 MEOX1 JASPAR yes 55562676
chr17 66231284 66231292 DLX6 JASPAR yes 21281215
chr17 66231284 66231292 EN1 JASPAR yes 21281216
chr17 66231284 66231292 LBX1 JASPAR yes 21281217
chr17 66231284 66231292 PAX4 JASPAR yes 21281218
chr17 66231284 66231292 PDX1 JASPAR yes 21281219
chr17 66231284 66231292 VAX1 JASPAR yes 21281220
chr17 66231284 66231292 VAX2 JASPAR yes 21281221
chr17 66231284 66231292 VSX1 JASPAR yes 21281222
chr17 66231284 66231292 VSX2 JASPAR yes 21281223
chr17 66231284 66231292 DLX6 JASPAR yes 55562677
chr17 66231284 66231292 EN1 JASPAR yes 55562678
chr17 66231284 66231292 LBX1 JASPAR yes 55562679
chr17 66231284 66231292 PAX4 JASPAR yes 55562680
chr17 66231284 66231292 PDX1 JASPAR yes 55562681
chr17 66231284 66231292 VAX1 JASPAR yes 55562682
chr17 66231284 66231292 VAX2 JASPAR yes 55562683
chr17 66231284 66231292 VSX1 JASPAR yes 55562684
chr17 66231284 66231292 VSX2 JASPAR yes 55562685
chr17 66231320 66231325 GATA2 JASPAR yes 21281224
chr17 66231320 66231325 GATA2 JASPAR yes 55562686
chr17 66231350 66231367 BCL6B JASPAR yes 21281225
chr17 66231350 66231367 BCL6B JASPAR yes 55562687
chr17 66231367 66231382 SCRT1 JASPAR yes 21281226
chr17 66231367 66231382 SCRT1 JASPAR yes 55562688
chr17 66231371 66231382 HOXC13 JASPAR yes 21281227
chr17 66231371 66231382 HOXC13 JASPAR yes 55562689
chr17 66231389 66231395 SOX10 JASPAR yes 21281228
chr17 66231389 66231395 SOX10 JASPAR yes 55562690
chr17 66231399 66231414 HNF4G JASPAR yes 21281229
chr17 66231399 66231414 HNF4G JASPAR yes 55562691
chr17 66231400 66231412 TFAP2A JASPAR yes 21281230
chr17 66231400 66231412 TFAP2B JASPAR yes 21281231
chr17 66231400 66231412 TFAP2C JASPAR yes 21281232
chr17 66231400 66231412 TFAP2A JASPAR yes 55562692
chr17 66231400 66231412 TFAP2B JASPAR yes 55562693
chr17 66231400 66231412 TFAP2C JASPAR yes 55562694
chr17 66231400 66231415 TFAP2A JASPAR yes 21281233
chr17 66231400 66231415 TFAP2A JASPAR yes 55562695
chr17 66231405 66231419 TLX1 JASPAR yes 21281234
chr17 66231405 66231419 TLX1 JASPAR yes 55562696
chr17 66231431 66231435 LFA1 TRANSFAC yes 21281235
chr17 66231431 66231435 LFA1 TRANSFAC yes 55562697
SNP sites on vista25673[chr17:66231111-66231433]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 66231262 rs34963864 C T no 5011339
chr17 66231370 rs8076542 C A,G
SCRT1
5011340
Genes possibly regulated by vista25673[chr17:66231111-66231433]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 66243715 66253297 + AMZ2 ENSG00000196704.7 66243715 0.78 0.99 16183 87718
chr17 66255323 66418872 + ARSG ENSG00000141337.8 66255323 0.68 1.0 16184 76110
chr17 66263167 66287408 - SLC16A6 ENSG00000108932.7 66287408 0.82 0.97 16185 44025
Expression level of Genes
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miRNAs possibly regulated by vista25673[chr17:66231111-66231433]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results