EnhancerDB
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  3. vista25700[chr17:66452519-66452682]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25700[chr17:66452519-66452682]
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Tissue distribution of vista25700
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Transcription factor that possibly regulate vista25700[chr17:66452519-66452682]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 66452593 66454748 POLR2A UCSC Txn Factor no Conserved 108287586
chr17 66452519 66452533 IRF8 JASPAR yes 21282623
chr17 66452530 66452543 ELF1 JASPAR yes 21282624
chr17 66452531 66452543 EHF JASPAR yes 21282625
chr17 66452531 66452543 ELF1 JASPAR yes 21282626
chr17 66452531 66452543 ELF4 JASPAR yes 21282627
chr17 66452531 66452544 ELF3 JASPAR yes 21282628
chr17 66452532 66452543 ELF5 JASPAR yes 21282629
chr17 66452533 66452543 ERF JASPAR yes 21282630
chr17 66452533 66452543 ETS1 JASPAR yes 21282631
chr17 66452533 66452543 ETV6 JASPAR yes 21282632
chr17 66452533 66452543 GABPA JASPAR yes 21282633
chr17 66452533 66452544 ELK4 JASPAR yes 21282634
chr17 66452533 66452544 FLI1 JASPAR yes 21282635
chr17 66452534 66452542 EHF JASPAR yes 21282636
chr17 66452534 66452542 FEV JASPAR yes 21282637
chr17 66452535 66452542 SPI1 JASPAR yes 21282638
chr17 66452557 66452561 ESR1 TRANSFAC yes 21282639
chr17 66452560 66452574 E2F7 JASPAR yes 21282640
chr17 66452563 66452569 SP1 TRANSFAC yes 21282641
chr17 66452584 66452594 TEAD1 JASPAR yes 21282642
chr17 66452584 66452594 TEAD4 JASPAR yes 21282643
chr17 66452585 66452593 TEAD3 JASPAR yes 21282644
chr17 66452587 66452598 STAT3 JASPAR yes 21282645
chr17 66452602 66452614 BHLHE23 JASPAR yes 21282646
chr17 66452603 66452613 BHLHE22 JASPAR yes 21282647
chr17 66452603 66452613 NEUROD2 JASPAR yes 21282648
chr17 66452603 66452613 OLIG1 JASPAR yes 21282649
chr17 66452603 66452613 OLIG2 JASPAR yes 21282650
chr17 66452603 66452613 OLIG3 JASPAR yes 21282651
chr17 66452603 66452615 TAL1 JASPAR yes 21282652
chr17 66452608 66452623 TFAP2C JASPAR yes 21282653
chr17 66452610 66452614 H4TF2 TRANSFAC yes 21282654
chr17 66452611 66452622 EBF1 JASPAR yes 21282655
chr17 66452612 66452618 MZF1 JASPAR yes 21282656
chr17 66452613 66452622 TFAP2A JASPAR yes 21282657
chr17 66452623 66452638 STAT1 JASPAR yes 21282658
chr17 66452624 66452643 RFX2 JASPAR yes 21282659
chr17 66452625 66452636 STAT1 JASPAR yes 21282660
chr17 66452625 66452636 STAT3 JASPAR yes 21282661
chr17 66452634 66452649 PRDM1 JASPAR yes 21282662
chr17 66452664 66452679 ESR2 JASPAR yes 21282663
SNP sites on vista25700[chr17:66452519-66452682]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 66452545 rs548440372 G A no 5013132
chr17 66452558 rs138197003 G C
ESR1
5013133
chr17 66452567 rs149519650 C T
E2F7 SP1
5013134
chr17 66452641 rs3072826 GGAAA G
POLR2A PRDM1 RFX2
5013135
chr17 66452641 rs34956330 GGAAA G
POLR2A PRDM1 RFX2
5013136
chr17 66452641 rs398031419 GGAAA G
POLR2A PRDM1 RFX2
5013137
Genes possibly regulated by vista25700[chr17:66452519-66452682]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 66417089 66453654 - WIPI1 ENSG00000070540.8 66453654 0.58 1.0 16186 99028
chr17 66507921 66547460 + PRKAR1A ENSG00000108946.10 66507921 0.69 0.99 16187 44761
chr17 66539369 66542970 + AC079210.1 ENSG00000269657.1 66539369 0.87 1.0 16189 13313
Expression level of Genes
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miRNAs possibly regulated by vista25700[chr17:66452519-66452682]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results